AC126877.1 (null) - Rat Genome Database

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Gene: AC126877.1 (null) Rattus norvegicus
Analyze
Symbol: AC126877.1
Name:
RGD ID: 15005000
Description:
Type: mirna
Latest Assembly: mRatBN7.2 Ensembl - mRatBN7.2 Assembly Ensembl
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0 Ensembl1055,576,266 - 55,576,354 (-)EnsemblRnor6.0rn6Rnor6.0


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:104
Count of miRNA genes:94
Interacting mature miRNAs:97
Transcripts:ENSRNOT00000075208
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium
Low 1 9 12 2 2 5 6 10 5 2
Below cutoff 1 1 1 1 1 2 1 1

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENSRNOT00000075208
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1055,576,266 - 55,576,354 (-)Ensembl
Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSRNOG00000046268 Ensembl
PhenoGen AC126877.1 PhenoGen
RatGTEx ENSRNOG00000046268 RatGTEx


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-11-08 AC126877.1        Symbol and Name status set to provisional 45752 PROVISIONAL