AABR07069371.1 (null) - Rat Genome Database

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Gene: AABR07069371.1 (null) Rattus norvegicus
Analyze
Symbol: AABR07069371.1
Name:
RGD ID: 15004364
Description: Predicted to be integral component of membrane.
Type: protein-coding
Latest Assembly: Rnor_6.0 Ensembl - RGSC Genome Assembly v6.0 Ensembl
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0 Ensembl818,437,787 - 18,508,971 (-)EnsemblRnor6.0rn6Rnor6.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

Genomics


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system nervous system renal system reproductive system respiratory system
High
Medium 8 1
Low 42 41 28 16 28 12 29 10
Below cutoff 3 1 15 12 3 12 8 20 3

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENSRNOT00000061339   ⟹   ENSRNOP00000058057
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl818,437,787 - 18,508,971 (-)Ensembl
Protein Sequences
Reference Sequences
RefSeq Acc Id: ENSRNOP00000058057   ⟸   ENSRNOT00000061339
Protein Domains
SEA

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSRNOG00000039931 Ensembl, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000058057 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000061339 UniProtKB/TrEMBL
Gene3D-CATH 3.30.70.960 UniProtKB/TrEMBL
InterPro MUC16 UniProtKB/TrEMBL
  SEA_dom UniProtKB/TrEMBL
  SEA_dom_sf UniProtKB/TrEMBL
PANTHER PTHR14672 UniProtKB/TrEMBL
Pfam SEA UniProtKB/TrEMBL
PhenoGen AABR07069371.1 PhenoGen
PROSITE SEA UniProtKB/TrEMBL
Superfamily-SCOP SSF82671 UniProtKB/TrEMBL
UniProt D3ZM49_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-11-08 AABR07069371.1        Symbol and Name status set to provisional 45752 PROVISIONAL