AABR07042789.1 (null) - Rat Genome Database

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Gene: AABR07042789.1 (null) Rattus norvegicus
Analyze
Symbol: AABR07042789.1
Name:
RGD ID: 15003572
Description: Predicted to enable DNA binding activity.
Type: protein-coding
Latest Assembly: mRatBN7.2 Ensembl - mRatBN7.2 Assembly Ensembl
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2 Ensembl198,335,702 - 8,335,905 (-)Ensembl
Rnor_6.0 Ensembl198,943,753 - 8,943,956 (-)EnsemblRnor6.0rn6Rnor6.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
1. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.

Genomics


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system renal system reproductive system
High
Medium
Low 1
Below cutoff 2 2 3

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENSRNOT00000030597   ⟹   ENSRNOP00000071181
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl198,335,702 - 8,335,905 (-)Ensembl
Rnor_6.0 Ensembl198,943,753 - 8,943,956 (-)Ensembl
Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSRNOG00000023805 Ensembl, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000071181 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000030597 UniProtKB/TrEMBL
InterPro RNA_pol_su_RPB10 UniProtKB/TrEMBL
  RNA_pol_suN_Zn-BS UniProtKB/TrEMBL
  RNAP_N/Rpb10 UniProtKB/TrEMBL
PANTHER PTHR23431 UniProtKB/TrEMBL
Pfam RNA_pol_N UniProtKB/TrEMBL
PhenoGen AABR07042789.1 PhenoGen
PIRSF RNA_pol_N/8_sub UniProtKB/TrEMBL
PROSITE RNA_POL_N_8KD UniProtKB/TrEMBL
Superfamily-SCOP SSF46924 UniProtKB/TrEMBL
UniProt A0A0G2JZT9_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-11-08 AABR07042789.1        Symbol and Name status set to provisional 45752 PROVISIONAL