Gm24798 (predicted gene, 24798) - Rat Genome Database

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Gene: Gm24798 (predicted gene, 24798) Mus musculus
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Symbol: Gm24798
Name: predicted gene, 24798
RGD ID: 15002776
MGI Page MGI
Description:
Type: snrna
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3913120,506,870 - 120,506,975 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl13120,506,870 - 120,506,975 (+)EnsemblGRCm39 Ensembl
GRCm3813120,045,334 - 120,045,439 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl13120,045,334 - 120,045,439 (+)EnsemblGRCm38mm10GRCm38
Cytogenetic Map13D2.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:37
Count of miRNA genes:37
Interacting mature miRNAs:37
Transcripts:ENSMUST00000179334
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357468Rplag_mreduced platelet aggregation (mouse)Not determined1395502130120883175Mouse
1301142Heal2_mwound healing/regeneration 2 (mouse)Not determined1393875267120883175Mouse
4142338Skmw18_mskeletal muscle weight 18 (mouse)Not determined1394528399120883175Mouse
1300939Hrtfm6_mheart failure modifier 6 (mouse)Not determined1391383692120883175Mouse
4142400Tgq24_mtriglyceride QTL 24 (mouse)Not determined102602630120883175Mouse
14746974Manh75_mmandible shape 75 (mouse)1399386647120883175Mouse
1300876Tanidd2_mtally ho associated non-insulin dependednt diabetes mellitus 2 (mouse)Not determined1391965303120883175Mouse
12879496Fexq2_mfear expression QTL 2 (mouse)13100741519120883175Mouse
1558763Gct9_mgranulosa cell tumorigenesis 9 (mouse)Not determined1395036824120883175Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XR_004938326 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC238811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000177961
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl13120,506,870 - 120,506,975 (+)Ensembl
RefSeq Acc Id: ENSMUST00000179334
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl13120,045,334 - 120,045,439 (+)Ensembl
RefSeq Acc Id: XR_004938326
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3913120,506,870 - 120,506,975 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000093829 Ensembl
  ENSMUSG00000119755 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000177961 ENTREZGENE
MGD MGI:5454575 ENTREZGENE
NCBI Gene Gm24798 ENTREZGENE
PhenoGen Gm24798 PhenoGen