Gm24763 (predicted gene, 24763) - Rat Genome Database

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Gene: Gm24763 (predicted gene, 24763) Mus musculus
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Symbol: Gm24763
Name: predicted gene, 24763
RGD ID: 15002360
MGI Page MGI
Description:
Type: snrna
RefSeq Status: MODEL
RGD Orthologs
Human
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X42,342,923 - 42,343,112 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX42,342,923 - 42,343,112 (+)EnsemblGRCm39 Ensembl
GRCm38X43,254,046 - 43,254,235 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX43,254,046 - 43,254,235 (+)EnsemblGRCm38mm10GRCm38
Cytogenetic MapXA4NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Comparative Map Data
Gm24763
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X42,342,923 - 42,343,112 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX42,342,923 - 42,343,112 (+)EnsemblGRCm39 Ensembl
GRCm38X43,254,046 - 43,254,235 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX43,254,046 - 43,254,235 (+)EnsemblGRCm38mm10GRCm38
Cytogenetic MapXA4NCBI
RNU2-33P
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381496,384,624 - 96,384,812 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1496,384,624 - 96,384,815 (+)EnsemblGRCh38hg38GRCh38
GRCh371496,850,961 - 96,851,149 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map14q32.2NCBI
CHM1_11496,789,801 - 96,789,989 (+)NCBICHM1_1
T2T-CHM13v2.01490,616,218 - 90,616,406 (+)NCBIT2T-CHM13v2.0

Variants

.
Variants in Gm24763
2 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:55
Count of miRNA genes:55
Interacting mature miRNAs:55
Transcripts:ENSMUST00000083688
Prediction methods:Miranda, Pita, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13208553Wght11_mweight 11 (mouse)X1186623959045360Mouse
27226780Femd12_mfemur midshaft diameter 12, 16 week (mouse)X3466365356845360Mouse
12738418Lfibq12_mliver fibrosis QTL 12 (mouse)X2572817443635700Mouse
1301278Bdln1_mbody length 1 (mouse)Not determinedX4170210675702218Mouse
4142200Rtwq1_mreduced testis weight QTL 1 (mouse)Not determined4147706075477203Mouse
27226750Femd9_mfemur midshaft diameter 9, 10 week (mouse)X3333746355845360Mouse
13208567Bmiq12_mbody mass index QTL 12 (mouse)X3526365377043606Mouse
1301009Pbwg7_mpostnatal body weight growth 7 (mouse)Not determinedX3911371473113814Mouse
4141565Pbwg21_mpostnatal body weight growth 21 (mouse)Not determinedX3911371473113814Mouse
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse
1300794Spha2_msperm head anomaly 2 (mouse)Not determinedX3992149886260137Mouse
13208557Lgth13_mbody length 13 (mouse)X1186623959045360Mouse
1558721Bw1_mbody weight QTL 1 (mouse)Not determinedX2060678347179225Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XR_004940578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL929300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000083688
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX42,342,923 - 42,343,112 (+)Ensembl
GRCm38.p6 EnsemblX43,254,046 - 43,254,235 (+)Ensembl
RefSeq Acc Id: XR_004940578
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X42,342,923 - 42,343,112 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000065622 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000083688 ENTREZGENE
MGD MGI:5454540 ENTREZGENE
NCBI Gene Gm24763 ENTREZGENE
PhenoGen Gm24763 PhenoGen