Gm49894 (predicted gene, 49894) - Rat Genome Database

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Gene: Gm49894 (predicted gene, 49894) Mus musculus
Analyze
Symbol: Gm49894
Name: predicted gene, 49894
RGD ID: 15001562
MGI Page MGI
Description:
Type: protein-coding (Ensembl: lncRNA)
Previously known as: transcription initiation factor TFIID subunit 4-like
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
NCBI Annotation Information: Genome Annotation Status: not in current annotation release
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39 Ensembl1769,689,199 - 69,691,203 (-)EnsemblGRCm39 Ensembl
GRCm381769,380,743 - 69,384,181 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1769,382,204 - 69,384,208 (-)EnsemblGRCm38mm10GRCm38


References

Genomics


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_030250167 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000233910
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1769,689,199 - 69,691,203 (-)Ensembl
GRCm38.p6 Ensembl1769,382,204 - 69,384,208 (-)Ensembl
RefSeq Acc Id: XM_030250167   ⟹   XP_030106027
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381769,380,743 - 69,384,181 (-)NCBI
Sequence:
Promoters
RGD ID:15094879
Promoter ID:EPDNEWNC_M2788
Type:single initiation site
Name:Gm49894_1
Description:predicted gene, 49894 [Source:MGI Symbol;Acc:MGI:6270585]
SO ACC ID:SO:0000170
Source:EPDNEWNC (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381769,384,201 - 69,384,261EPDNEWNC

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000117069 Ensembl
MGD MGI:6270585 ENTREZGENE
NCBI Gene Gm49894 ENTREZGENE
PhenoGen Gm49894 PhenoGen