Gene: Gm25142 (predicted gene, 25142) Mus musculus |
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Analyze |
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Symbol: |
Gm25142 |
Name: |
predicted gene, 25142 |
RGD ID: |
15001367 |
MGI Page |
MGI |
Description: |
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Type: |
snrna
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RefSeq Status: |
MODEL |
RGD Orthologs |
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Alliance Genes |
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More Info |
more info ...
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More Info |
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Latest Assembly: |
GRCm39 - Mouse Genome Assembly GRCm39 |
Position: |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 11 | 5,201,850 - 5,201,956 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 11 | 5,201,850 - 5,201,956 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 11 | 5,251,850 - 5,251,956 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 11 | 5,251,850 - 5,251,956 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | Cytogenetic Map | 11 | A1 | NCBI | | | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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References
Genomics
Comparative Map Data
Gm25142 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 11 | 5,201,850 - 5,201,956 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 11 | 5,201,850 - 5,201,956 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 11 | 5,251,850 - 5,251,956 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 11 | 5,251,850 - 5,251,956 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | Cytogenetic Map | 11 | A1 | NCBI | | | | |
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RNU6-484P (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 5 | 37,700,331 - 37,700,437 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 5 | 37,700,331 - 37,700,437 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 5 | 37,700,433 - 37,700,539 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Cytogenetic Map | 5 | p13.2 | NCBI | | | | | CHM1_1 | 5 | 37,702,474 - 37,702,580 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 5 | 37,949,516 - 37,949,622 (-) | NCBI | | T2T-CHM13v2.0 | | |
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LOC119869460 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Dog10K_Boxer_Tasha | 15 | 3,103,220 - 3,103,325 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 15 | 2,933,045 - 2,933,150 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 15 | 2,933,045 - 2,933,150 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 15 | 2,840,117 - 2,840,222 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 15 | 2,899,972 - 2,900,077 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 15 | 2,916,411 - 2,916,516 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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miRNA Target Status
Predicted Target Of
Count of predictions: | 143 | Count of miRNA genes: | 129 | Interacting mature miRNAs: | 141 | Transcripts: | ENSMUST00000082698 | Prediction methods: | Miranda, Rnahybrid, Targetscan | Result types: | miRGate_prediction | |
QTLs in Region (GRCm39)
1357722 | Vtbt11_m | vertebral trabecular bone trait 11 (mouse) | | | Not determined | | 11 | 1 | 23880487 | Mouse | 1300768 | Tshp9_m | tooth shape 9 (mouse) | | | Not determined | | 11 | 1 | 25976374 | Mouse | 1301765 | Skull15_m | skull morphology 15 (mouse) | | | Not determined | | 11 | 1 | 25976374 | Mouse | 1300661 | Lmr6_m | leishmaniasis resistance 6 (mouse) | | | Not determined | | 11 | 1 | 25976374 | Mouse | 10044008 | Hbnr15_m | Heligmosomoides bakeri nematode resistance 15 (mouse) | | | Not determined | | 11 | 227052 | 34227232 | Mouse | 1300599 | Cocrb11_m | cocaine related behavior 11 (mouse) | | | Not determined | | 11 | 2670355 | 36671472 | Mouse | 27095914 | Pglq16_m | pelvic girdle length QTL 16, 16 week (mouse) | | | | | 11 | 3250000 | 18150000 | Mouse | 27095919 | Pglq10_m | pelvic girdle length QTL 10, 10 week (mouse) | | | | | 11 | 3250000 | 18450000 | Mouse | 27095925 | Pglq5_m | pelvic girdle length QTL 5, 5 week (mouse) | | | | | 11 | 3250000 | 19750000 | Mouse | 27095904 | Scvln12_m | sacral vertebrae length 2, 10 week (mouse) | | | | | 11 | 3250000 | 34495048 | Mouse | 27095909 | Scvln6_m | sacral vertebrae length 2, 5 week (mouse) | | | | | 11 | 3250000 | 44090827 | Mouse | 27226798 | Scvln18_m | sacral vertebrae length 2, 16 week (mouse) | | | | | 11 | 3250000 | 60690826 | Mouse | 26884446 | Sklq10_m | skull length QTL 10, 10 week (mouse) | | | | | 11 | 3250000 | 62890826 | Mouse | 26884453 | Sklq16_m | skull length QTL 16, 16 week (mouse) | | | | | 11 | 3250000 | 72690826 | Mouse | 13208559 | Wght10_m | weight 10 (mouse) | | | | | 11 | 3950000 | 88890826 | Mouse | 13208558 | Lgth12_m | body length 12 (mouse) | | | | | 11 | 3950000 | 94890826 | Mouse | 10053676 | Eae44a_m | experimental allergic encephalomyelitis susceptibility 44a (mouse) | | | Not determined | | 11 | 4507896 | 21379532 | Mouse | 27226741 | Metcl5_m | metatarsal-calcaneal length 5, 5 week (mouse) | | | | | 11 | 4650000 | 46290827 | Mouse | |