Gm22522 (predicted gene, 22522) - Rat Genome Database

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Gene: Gm22522 (predicted gene, 22522) Mus musculus
Analyze
Symbol: Gm22522
Name: predicted gene, 22522
RGD ID: 15000613
MGI Page MGI
Description:
Type: pseudo (Ensembl: snoRNA)
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X157,156,078 - 157,156,228 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX157,156,078 - 157,156,228 (+)EnsemblGRCm39 Ensembl
GRCm38X158,373,082 - 158,373,232 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX158,373,082 - 158,373,232 (+)EnsemblGRCm38mm10GRCm38
Cytogenetic MapXF4NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm22522
4 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:130
Count of miRNA genes:126
Interacting mature miRNAs:130
Transcripts:ENSMUST00000158271
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357823Spha3_msperm head anomaly 3 (mouse)Not determinedX102055848162758941Mouse
1301209Cia19_mcollagen induced arthritis 19 (mouse)Not determinedX120993165160213038Mouse
10412164Cmv2_mcytomegalovirus resistance 2 (mouse)Not determinedX125685149159685269Mouse
1558900Bw3_mbody weight QTL 3 (mouse)Not determinedX133540040165298595Mouse
10401118Pgia39_mproteoglycan induced arthritis 39 (mouse)Not determinedX144474380169476592Mouse
1302000Pgia25_mproteoglycan induced arthritis 2 (mouse)Not determinedX144474380169476592Mouse
12738421Lfibq17_mliver fibrosis QTL 17 (mouse)X148148453164945064Mouse


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide AL805936 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000158271
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX157,156,078 - 157,156,228 (+)Ensembl
GRCm38.p6 EnsemblX158,373,082 - 158,373,232 (+)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000088896 Ensembl, ENTREZGENE
MGD MGI:5452299 ENTREZGENE
NCBI Gene Gm22522 ENTREZGENE
PhenoGen Gm22522 PhenoGen