Gm24152 (predicted gene, 24152) - Rat Genome Database

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Gene: Gm24152 (predicted gene, 24152) Mus musculus
Analyze
Symbol: Gm24152
Name: predicted gene, 24152
RGD ID: 15000574
MGI Page MGI
Description:
Type: snrna
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3949,695,645 - 9,695,807 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl49,695,645 - 9,695,807 (-)EnsemblGRCm39 Ensembl
GRCm3849,695,645 - 9,695,807 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl49,695,645 - 9,695,807 (-)EnsemblGRCm38mm10GRCm38
Cytogenetic Map4A1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm24152
8 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:54
Count of miRNA genes:53
Interacting mature miRNAs:53
Transcripts:ENSMUST00000082764
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11049579Lmr9b_mleishmaniasis resistance 9b (mouse)4120657234Mouse
11049580Lmr9a_mleishmaniasis resistance 9 (mouse)4120657234Mouse
1301274Lmr9_mleishmaniasis resistance 9 (mouse)Not determined4120657234Mouse
10412079Sm1_msusceptibility to Schistosoma mansoni infection 1 (mouse)Not determined4122955614Mouse
1301510Bbaa13_mB.burgdorferi-associated arthritis 13 (mouse)Not determined4126395649Mouse
11567249Elorr3_methanol induced loss of righting response 3 (mouse)43722677156268235Mouse
1302010Wta1_mweight adult 1 (mouse)Not determined4868324042683429Mouse
1558992Ses8_msalmonella enteritidis susceptibility 8 (mouse)Not determined4868324042683429Mouse
1301473Triglq1_mtriglyceride QTL 1 (mouse)Not determined4868324042683429Mouse
1302125Lxw1_mlupus BXSB x NZW 1 (mouse)Not determined4868324042683429Mouse
4141302Ssrq5_mstress response QTL 5 (mouse)Not determined868324042683430Mouse
10401905Sicd3_mseizure-induced cell death 3 (mouse)Not determined4939552543760862Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XR_004942364 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL773548 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000082764
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl49,695,645 - 9,695,807 (-)Ensembl
GRCm38.p6 Ensembl49,695,645 - 9,695,807 (-)Ensembl
RefSeq Acc Id: XR_004942364
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3949,695,645 - 9,695,807 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000064698 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000082764 ENTREZGENE
MGD MGI:5453929 ENTREZGENE
NCBI Gene Gm24152 ENTREZGENE
PhenoGen Gm24152 PhenoGen