Gm23437 (predicted gene, 23437) - Rat Genome Database

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Gene: Gm23437 (predicted gene, 23437) Mus musculus
Analyze
Symbol: Gm23437
Name: predicted gene, 23437
RGD ID: 15000142
MGI Page MGI
Description:
Type: snorna
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3914107,003,464 - 107,003,590 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl14107,003,464 - 107,003,590 (+)EnsemblGRCm39 Ensembl
GRCm3814106,766,030 - 106,766,156 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl14106,766,030 - 106,766,156 (+)EnsemblGRCm38mm10GRCm38
Cytogenetic Map14E2.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm23437
2 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:116
Count of miRNA genes:110
Interacting mature miRNAs:116
Transcripts:ENSMUST00000104036
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
1301844Pgia29_mproteoglycan induced arthritis 29 (mouse)Not determined1474352296108352384Mouse
1558819Ossc2_mosteosarcoma susceptibility 2 (mouse)Not determined1474394976108395093Mouse
14928314Manh77_mmandible shape 77 (mouse)1476767790110767790Mouse
1558823Tbbmd6_mtotal body bone mineral density 6 (mouse)Not determined1477073696111073787Mouse
4142508Tgq25_mtriglyceride QTL 25 (mouse)Not determined85134068119134068Mouse
12792981Fbmd5_mfemoral bone mineral density 5, females only (mouse)1499838217125033054Mouse
12798541Scvg3_msubcutaneous vessel growth QTL 3 (mouse)14105544636117275989Mouse
10755523Hgb2_mhemoglobin 2 (mouse)14105884654125139656Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XR_004938730 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC154746 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000104036
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14107,003,464 - 107,003,590 (+)Ensembl
GRCm38.p6 Ensembl14106,766,030 - 106,766,156 (+)Ensembl
RefSeq Acc Id: XR_004938730
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914107,003,464 - 107,003,590 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000077224 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000104036 ENTREZGENE
MGD MGI:5453214 ENTREZGENE
NCBI Gene Gm23437 ENTREZGENE
PhenoGen Gm23437 PhenoGen