Gm23705 (predicted gene, 23705) - Rat Genome Database

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Gene: Gm23705 (predicted gene, 23705) Mus musculus
Analyze
Symbol: Gm23705
Name: predicted gene, 23705
RGD ID: 14999674
MGI Page MGI
Description:
Type: snorna
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X41,770,634 - 41,770,763 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX41,770,634 - 41,770,763 (-)EnsemblGRCm39 Ensembl
GRCm38X42,681,757 - 42,681,886 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX42,681,757 - 42,681,886 (-)EnsemblGRCm38mm10GRCm38
Cytogenetic MapXA4NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm23705
1 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:123
Count of miRNA genes:115
Interacting mature miRNAs:122
Transcripts:ENSMUST00000104370
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse
13208553Wght11_mweight 11 (mouse)X1186623959045360Mouse
13208557Lgth13_mbody length 13 (mouse)X1186623959045360Mouse
1558721Bw1_mbody weight QTL 1 (mouse)Not determinedX2060678347179225Mouse
12738418Lfibq12_mliver fibrosis QTL 12 (mouse)X2572817443635700Mouse
27226750Femd9_mfemur midshaft diameter 9, 10 week (mouse)X3333746355845360Mouse
27226780Femd12_mfemur midshaft diameter 12, 16 week (mouse)X3466365356845360Mouse
13208567Bmiq12_mbody mass index QTL 12 (mouse)X3526365377043606Mouse
1301009Pbwg7_mpostnatal body weight growth 7 (mouse)Not determinedX3911371473113814Mouse
4141565Pbwg21_mpostnatal body weight growth 21 (mouse)Not determinedX3911371473113814Mouse
1300794Spha2_msperm head anomaly 2 (mouse)Not determinedX3992149886260137Mouse
4142200Rtwq1_mreduced testis weight QTL 1 (mouse)Not determined4147706075477203Mouse
1301278Bdln1_mbody length 1 (mouse)Not determinedX4170210675702218Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XR_004940551 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL929061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000104370
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX41,770,634 - 41,770,763 (-)Ensembl
GRCm38.p6 EnsemblX42,681,757 - 42,681,886 (-)Ensembl
RefSeq Acc Id: XR_004940551
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X41,770,634 - 41,770,763 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000077558 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000104370 ENTREZGENE
MGD MGI:5453482 ENTREZGENE
NCBI Gene Gm23705 ENTREZGENE
PhenoGen Gm23705 PhenoGen