Gm24032 (predicted gene, 24032) - Rat Genome Database

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Gene: Gm24032 (predicted gene, 24032) Mus musculus
Analyze
Symbol: Gm24032
Name: predicted gene, 24032
RGD ID: 14999327
MGI Page MGI
Description:
Type: snrna
RefSeq Status: MODEL
RGD Orthologs
Human
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391396,033,470 - 96,033,628 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1396,033,470 - 96,033,628 (-)EnsemblGRCm39 Ensembl
GRCm381395,896,962 - 95,897,120 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1395,896,962 - 95,897,120 (-)EnsemblGRCm38mm10GRCm38
Cytogenetic Map13D1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Comparative Map Data
Gm24032
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391396,033,470 - 96,033,628 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1396,033,470 - 96,033,628 (-)EnsemblGRCm39 Ensembl
GRCm381395,896,962 - 95,897,120 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1395,896,962 - 95,897,120 (-)EnsemblGRCm38mm10GRCm38
Cytogenetic Map13D1NCBI
RNU1-88P
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38636,639,567 - 36,639,672 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl636,639,545 - 36,639,672 (-)EnsemblGRCh38hg38GRCh38
GRCh37636,607,344 - 36,607,449 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map6p21.2NCBI
CHM1_1636,609,108 - 36,609,213 (-)NCBICHM1_1
T2T-CHM13v2.0636,460,209 - 36,460,314 (-)NCBIT2T-CHM13v2.0

Variants

.
Variants in Gm24032
8 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:66
Count of miRNA genes:64
Interacting mature miRNAs:64
Transcripts:ENSMUST00000083932
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142147Mvwf4_mmodifier of von Willebrand factor 4 (mouse)Not determined20477612112898424Mouse
10412235Scgq5_mspontaneous crescentic glomerulonephritis QTL 5 (mouse)Not determined133606090896239162Mouse
4142314Tailaq3_mtail length adjusted QTL 3 (mouse)Not determined55720354112431103Mouse
4140959W10q17_mweight 10 weeks QTL 17 (mouse)Not determined55720354112431103Mouse
4141992W6q16_mweight 6 weeks QTL 16 (mouse)Not determined55720354112431103Mouse
4142241Tailq3_mtail length QTL 3 (mouse)Not determined55720354112431103Mouse
10402414Sgp5_mserum gp70 production 5 (mouse)Not determined1356470456105422186Mouse
1357553Cia28_mcollagen induced arthritis 28 (mouse)Not determined135662924996239162Mouse
1300941Skl6_mskeletal size (tail length) 6 (mouse)Not determined136425082198250945Mouse
1301949Skull20_mskull morphology 20 (mouse)Not determined136425082198250945Mouse
1301445Listr2_mlisteriosis resistance 2 (mouse)Not determined1366744601100744746Mouse
1301593Heal8_mwound healing/regeneration 8 (mouse)Not determined1368053999102054119Mouse
14696726Kidrq3_mkidney weight, right QTL 3 (mouse)1368217066102217066Mouse
14747007Mancz11_mmandible centroid size 11 (mouse)1370111284104111284Mouse
4141266Mol3_mmodifier of LPS-response 3 (mouse)Not determined76132600112431103Mouse
12880414V125Dq10_mvitamin D active form serum level QTL 10 (mouse)1378036508112036508Mouse
12880402Emlq1_memotional learning QTL 1 (mouse)137810885896866553Mouse
10043997Bw40_mbody weight QTL 40 (mouse)Not determined1479239045113239162Mouse
10045623Heal18_mwound healing regeneration 18 (mouse)Not determined1379239045113239162Mouse
1558741Ses10_msalmonella enteritidis susceptibility 10 (mouse)Not determined1382739968116740106Mouse
4142465Pbwg17_mpostnatal body weight growth 17 (mouse)Not determined1383876060117876256Mouse
14700691Cisaq1_mcoxsackieviral infection serum ALT QTL 1 (mouse)1386148119120461536Mouse
4140995Fbtq6_mfemoral bone trait QTL 6 (mouse)Not determined1386341617120341758Mouse
4141728Egaq4_mearly growth adjusted QTL 4 (mouse)Not determined87901985112431103Mouse
1300939Hrtfm6_mheart failure modifier 6 (mouse)Not determined1391383692120883175Mouse
1300876Tanidd2_mtally ho associated non-insulin dependednt diabetes mellitus 2 (mouse)Not determined1391965303120883175Mouse
1301142Heal2_mwound healing/regeneration 2 (mouse)Not determined1393875267120883175Mouse
4142338Skmw18_mskeletal muscle weight 18 (mouse)Not determined1394528399120883175Mouse
1558763Gct9_mgranulosa cell tumorigenesis 9 (mouse)Not determined1395036824120883175Mouse
1357468Rplag_mreduced platelet aggregation (mouse)Not determined1395502130120883175Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XR_004938283 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC163685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000083932
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1396,033,470 - 96,033,628 (-)Ensembl
GRCm38.p6 Ensembl1395,896,962 - 95,897,120 (-)Ensembl
RefSeq Acc Id: XR_004938283
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391396,033,470 - 96,033,628 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000065866 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000083932 ENTREZGENE
MGD MGI:5453809 ENTREZGENE
NCBI Gene Gm24032 ENTREZGENE
PhenoGen Gm24032 PhenoGen