Gene: Gm24313 (predicted gene, 24313) Mus musculus |
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Analyze |
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Symbol: |
Gm24313 |
Name: |
predicted gene, 24313 |
RGD ID: |
14999126 |
MGI Page |
MGI |
Description: |
INTERACTS WITH (-)-epigallocatechin 3-gallate (ortholog); 2,3,7,8-tetrachlorodibenzodioxine (ortholog); 2-hydroxypropanoic acid (ortholog) |
Type: |
snorna
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RefSeq Status: |
MODEL |
RGD Orthologs |
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Alliance Genes |
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More Info |
more info ...
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More Info |
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Latest Assembly: |
GRCm39 - Mouse Genome Assembly GRCm39 |
Position: |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 11 | 6,569,808 - 6,569,940 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 11 | 6,569,808 - 6,569,940 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 11 | 6,619,808 - 6,619,940 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 11 | 6,619,808 - 6,619,940 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | Cytogenetic Map | 11 | A1 | NCBI | | | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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References
Genomics
Comparative Map Data
Gm24313 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 11 | 6,569,808 - 6,569,940 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 11 | 6,569,808 - 6,569,940 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 11 | 6,619,808 - 6,619,940 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 11 | 6,619,808 - 6,619,940 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | Cytogenetic Map | 11 | A1 | NCBI | | | | |
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SNORA5A (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 7 | 45,104,349 - 45,104,482 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 7 | 45,104,349 - 45,104,482 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 7 | 45,143,948 - 45,144,081 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 7 | 45,110,473 - 45,110,606 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 7 | 45,242,791 - 45,242,924 (-) | NCBI | | Celera | | | Cytogenetic Map | 7 | p13 | NCBI | | | | | HuRef | 7 | 45,027,753 - 45,027,886 (-) | NCBI | | HuRef | | | CHM1_1 | 7 | 45,147,637 - 45,147,770 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 7 | 45,265,150 - 45,265,283 (-) | NCBI | | T2T-CHM13v2.0 | | | CRA_TCAGchr7v2 | 7 | 45,183,118 - 45,183,251 (-) | NCBI | | | | |
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LOC120096784 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 14 | 85,700,633 - 85,700,761 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 14 | 81,486,718 - 81,486,846 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 14 | 81,486,718 - 81,486,846 (-) | Ensembl | | mRatBN7.2 Ensembl | | | Rnor_6.0 Ensembl | 14 | 86,881,541 - 86,881,669 (-) | NCBI | Rnor6.0 | | rn6 | Rnor6.0 | Cytogenetic Map | 14 | q21 | NCBI | | | | |
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LOC119869669 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Dog10K_Boxer_Tasha | 16 | 2,632,195 - 2,632,329 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 16 | 14,228,557 - 14,228,691 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 16 | 14,228,557 - 14,228,691 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UNSW_CanFamBas_1.0 | 16 | 13,861,465 - 13,861,599 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 16 | 13,840,923 - 13,841,057 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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miRNA Target Status
Predicted Target Of
Count of predictions: | 188 | Count of miRNA genes: | 167 | Interacting mature miRNAs: | 181 | Transcripts: | ENSMUST00000082561 | Prediction methods: | Miranda, Rnahybrid, Targetscan | Result types: | miRGate_prediction | |