Gm23013 (predicted gene, 23013) - Rat Genome Database

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Gene: Gm23013 (predicted gene, 23013) Mus musculus
Analyze
Symbol: Gm23013
Name: predicted gene, 23013
RGD ID: 14996048
MGI Page MGI
Description:
Type: snrna
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39614,457,044 - 14,457,147 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl614,457,044 - 14,457,149 (-)EnsemblGRCm39 Ensembl
GRCm38614,457,045 - 14,457,148 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl614,457,045 - 14,457,150 (-)EnsemblGRCm38mm10GRCm38
Cytogenetic Map6A1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm23013
2 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:32
Count of miRNA genes:32
Interacting mature miRNAs:32
Transcripts:ENSMUST00000104146
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301998Bts2_mbladder tumor susceptibility 2 (mouse)Not determined61275122146751333Mouse
1302024Skull7_mskull morphology 7 (mouse)Not determined6132144495Mouse
1302051Sluc7_msusceptibility to lung cancer 7 (mouse)Not determined6929707443297168Mouse
1357520Axtq2_manxiety QTL 2 (mouse)Not determined6450382348703611Mouse
1300556Cia6_mcollagen induced arthritis QTL 6 (mouse)Not determined6446488487403016Mouse
1300731Smdq3_msegregation of mitochondrial DNA QTL 3 (mouse)Not determined6424920638249325Mouse
1357503Nhdlq5_mnon-HDL QTL 5 (mouse)Not determined6121465015Mouse
1301131Chol2_mcholesterol 2 (mouse)Not determined6132144495Mouse
1301178Lith10_mlithogenic gene 10 (mouse)Not determined6121465015Mouse
1357481Aaj2_manxiety in A/J 2 (mouse)Not determined6450382348703611Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396633110Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396633110Mouse
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396633110Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396633110Mouse
4141749Obrq2_mobesity resistance QTL 2 (mouse)Not determined1275122146751333Mouse
5491191Mobq2_mmultigenic obesity QTL 2 (mouse)Not determined6132144495Mouse
10043869Cia6a_mcollagen induced arthritis QTL 6a (mouse)Not determined61211797146118069Mouse
10043884Bhr8_mbronchial hyperresponsiveness 8 (mouse)Not determined6121465015Mouse
10044000Mobq9_mmultigenetic obesity QTL 9 (mouse)Not determined6121465015Mouse
26884441Sklq3_mskull length QTL 3, 5 week (mouse)6760000080576983Mouse
15039372Nmrs22_mNAFLD-associated magnetic resonance shift 22 (mouse)6147633435476334Mouse
12904942Tammq3_mtibialis anterior muscle mass QTL 3 (mouse)6125514064Mouse
12904934Edlmmq4_mextensor digitorum longus muscle mass QTL 4 (mouse)6125514064Mouse
11353841Bmiq3_mbody mass index QTL 3 (mouse)6450382348703611Mouse
11353840Bmiq2_mbody mass index QTL 2 (mouse)6450382345291115Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139076998Mouse
12904955Gmmq3_mgastrocnemius muscle mass QTL 3 (mouse)6125514064Mouse
11353836Bmiq1_mbody mass index QTL 1 (mouse)6450382329751333Mouse
14746985Manh59_mmandible shape 59 (mouse)6120847193Mouse
25440480Moaq2_mmodifier of alien QTL 2 (mouse)63050001117476961Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XR_004933860 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC131694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000104146
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl614,457,044 - 14,457,149 (-)Ensembl
GRCm38.p6 Ensembl614,457,045 - 14,457,150 (-)Ensembl
RefSeq Acc Id: XR_004933860
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39614,457,044 - 14,457,147 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000077334 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000104146 ENTREZGENE
MGD MGI:5452790 ENTREZGENE
NCBI Gene Gm23013 ENTREZGENE
PhenoGen Gm23013 PhenoGen