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Gene: FGF11 (fibroblast growth factor 11) Sus scrofa

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Symbol:

FGF11

Name:

fibroblast growth factor 11

RGD ID:

14295375

Description:

ENCODES a protein that exhibits acetylcholine-gated monoatomic cation-selective channel activity (inferred); extracellular ligand-gated monoatomic ion channel activity (inferred); growth factor activity (inferred); INVOLVED IN excitatory postsynaptic potential (inferred); monoatomic ion transmembrane transport (inferred); regulation of postsynaptic membrane potential (inferred); ASSOCIATED WITH common variable immunodeficiency (ortholog); congenital myasthenic syndrome 2A (ortholog); dyskeratosis congenita (ortholog); FOUND IN membrane (inferred); plasma membrane (inferred); postsynaptic membrane (inferred)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	52,742,131 - 52,748,487 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	52,742,090 - 52,749,331 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	55,003,942 - 55,010,295 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

common variable immunodeficiency (ISO)

congenital myasthenic syndrome 2A (ISO)

dyskeratosis congenita (ISO)

intellectual disability (ISO)

Li-Fraumeni syndrome (ISO)

very long chain acyl-CoA dehydrogenase deficiency (ISO)

Weissenbacher-Zweymuller syndrome (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

excitatory postsynaptic potential (IEA)

monoatomic ion transmembrane transport (IEA)

regulation of postsynaptic membrane potential (IEA)

signal transduction (IEA)

Cellular Component

membrane (IEA)

plasma membrane (IEA)

postsynaptic membrane (IEA)

synapse (IEA)

Molecular Function

acetylcholine-gated monoatomic cation-selective channel activity (IEA)

extracellular ligand-gated monoatomic ion channel activity (IEA)

growth factor activity (IEA)

protein binding (ISO)

transmembrane signaling receptor activity (IEA)

References

Additional References at PubMed

PMID:14681463	PMID:17145712	PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

FGF11
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	52,742,131 - 52,748,487 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	52,742,090 - 52,749,331 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	55,003,942 - 55,010,295 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FGF11
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	7,438,298 - 7,444,937 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	7,438,273 - 7,444,937 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	7,341,617 - 7,348,256 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	7,283,413 - 7,288,975 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	17	7,283,412 - 7,288,973	NCBI
Celera	17	7,368,577 - 7,374,139 (+)	NCBI		Celera
Cytogenetic Map	17	p13.1	NCBI
HuRef	17	7,236,633 - 7,242,196 (+)	NCBI		HuRef
CHM1_1	17	7,351,783 - 7,357,349 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	17	7,342,353 - 7,348,996 (+)	NCBI		T2T-CHM13v2.0

Fgf11
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	69,686,894 - 69,693,775 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	69,686,894 - 69,692,683 (-)	Ensembl		GRCm39 Ensembl
GRCm38	11	69,796,068 - 69,802,944 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	69,796,068 - 69,801,857 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	69,611,704 - 69,615,127 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	69,614,397 - 69,617,820 (-)	NCBI		MGSCv36	mm8
MGSCv36	11	70,382,309 - 70,385,732 (-)	NCBI		MGSCv36	mm8
Cytogenetic Map	11	B3	NCBI
cM Map	11	42.88	NCBI

Fgf11
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	55,015,232 - 55,020,773 (-)	NCBI		GRCr8
mRatBN7.2	10	54,516,508 - 54,522,067 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	54,517,077 - 54,522,062 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	59,181,104 - 59,184,444 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	58,669,672 - 58,673,010 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	54,177,325 - 54,180,659 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	56,403,320 - 56,410,816 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	56,403,256 - 56,409,017 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	56,150,464 - 56,153,978 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	56,619,650 - 56,622,972 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	56,633,272 - 56,636,595 (-)	NCBI
Celera	10	53,672,872 - 53,676,194 (-)	NCBI		Celera
Cytogenetic Map	10	q24	NCBI

Fgf11
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955467	9,482,467 - 9,488,992 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955467	9,482,467 - 9,488,992 (-)	NCBI	ChiLan1.0	ChiLan1.0

FGF11
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	15,035,065 - 15,041,731 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	17,002,058 - 17,007,522 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	7,472,262 - 7,478,927 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	7,460,995 - 7,465,105 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	7,459,880 - 7,465,105 (+)	Ensembl	panpan1.1		panPan2

FGF11
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	32,368,380 - 32,375,031 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	32,369,831 - 32,373,020 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	32,506,201 - 32,513,135 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	32,473,777 - 32,480,720 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	32,475,515 - 32,480,715 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	32,439,009 - 32,445,945 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	32,397,737 - 32,404,667 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	32,575,007 - 32,581,943 (+)	NCBI		UU_Cfam_GSD_1.0

Fgf11
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	47,247,083 - 47,253,657 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936595	721,333 - 727,845 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936595	721,295 - 727,845 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FGF11
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	6,814,392 - 6,821,727 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	6,818,208 - 6,821,721 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666059	14,586,674 - 14,592,596 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Fgf11
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624786	10,050,002 - 10,056,390 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624786	10,049,954 - 10,056,376 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in FGF11
166 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_013981311	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000082	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK238005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK393788	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK395601	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01100307	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000078202 ⟹ ENSSSCP00000070350

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	12	52,742,131 - 52,748,487 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000078649 ⟹ ENSSSCP00000061701

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	12	52,745,656 - 52,748,480 (+)	Ensembl

RefSeq Acc Id:

XM_013981311 ⟹ XP_013836765

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	12	52,742,090 - 52,749,331 (+)	NCBI

Sequence:

show sequence

GGCCGGCTCTCCGAGGAGGGGGAGCTGCTGTCGCCGTCGCCGCCTCAGCTTCCCACAGCCGCTA
CCGCTGCCGCCGCTGCCGCCTCGCCGCTTGGTCCAGCCGCCAGGCCCAGTGCTCACTTCGCCCG
ACCAGGGCGCTCTGCGGAGACACCCTCACTCCTTCCTGGGGTCCGGGACGCCTAGCTGGGCGTG
GGGGGAAGCTCCGCTTGCGGGGTACAGGGAGGGAGGAGCCTGGAACCGGAGCCAGCGCCAGCCG
TCGCCGGATCGACAAGACAGGACAGGTTGAGGGGCGTCGGGGAAGGAAGAGGGGGTGTTATAGG
CAGTCCCGGGGAGGACCAGGAAGCCCTGTCGCAGAAAGCTCCGATGCGCTCTTGACTTACAGGG
GGTCTGCTCACATTTGGGGACCCGTGACAACGTGGGTGCACTCCTCTCTCGGGGGGCTGGTTGG
ATTGGAGGGCGTGGGATCTAAACAGCACCAGCTGTCCCCGAGGAAATTAAGGGGCTGCCAGAAA
AAAAAGGAAAACCAAAAACCTATGCTCCTTATTCCGAGGTGACAGAGGGCCCTTCAGACAACCA
CCTGGTGTAACCACTAGGAAGGGCGGATTTGGAGGTGACTTCAAAAGGAGTGGAGGGTAACAAG
GTGAGGAAAGGGGCTCAGCAGCTGGAACGCTGTGCCACTAGAAATGGGGGTGACTTGGTGAGAA
ATGGTTTTGTCCAGAGACAGGGCCTGGGAACCTCTTCACTGAACAGGGACAGTCTGGATATTTC
CAGATATAGTTTTGGGGGATTCCAGTGGGGGGAAAAAAAGTGGGGGATTCTGCACTTCGTGGGT
GGCAAAGGAAAAGACACCCGAGGTTGGGTTCTTCCCTGACATTGGCAGCACCCCAGCAGGAGTG
AGGCGAGCTAATACCCCCCAAACTAAGGACCCACACACTTAAGATTGCAAGAGTGGATTTGGCT
GGAGTGCAGGGCCTGAAACAGGGTGGGAAGGTGCCTGGGAATACTGAAACCGTAGCTTGGAAAA
TTTGAGGGTCTTGGCTTTGGGACAGGGGAAGTGGGGGACAGGGACACTGGAGATCAGGGAAAGG
AGGAGTGTTCAGAAGGGGGACCAAAGTTGAGGGTGGGGTCCATTGAGAGGTGCAGAGGCTGCAA
GGTCTGGCAGGCGGAGCTAGCGCCGGGCCCAAGGGTGGGAGCTGGTGCCAGGGGTGAGGGTCGT
CTAGGGCTTATCCTCAGGTCCTCTGGGTGGGGCGGTGAGTCGGGACCGGAGCGTCAGGAGCATG
TCCTGGTGAGCGAGCGGGCTTCTCTGGAGGAGCCCAGCGCGCTCCGGACGCCCGCCGGTTTGGG
GGTGTCTTCTCCCGGGGCGCCATGGCGGCGCTGGCCAGTAGCCTGATCCGGCAGAAGCGGGAGG
TCCGCGAGCCCGGGGGCAGCCGGCCCGTGTCGGCGCAGCGGCGCGTGTGTCCCCGCGGCACCAA
GTCCCTTTGCCAGAAGCAGCTCCTCATCCTGCTGTCCAAGGTGCGACTGTGCGGGGGGCGGCCC
GCGCGGCCGGACCGCGGCCCGGAGCCTCAGCTCAAAGGCATCGTCACCAAACTGTTCTGCCGCC
AGGGGTTCTACCTCCAGGCGAATCCCGACGGGAGCATCCAGGGCACCCCAGAGGACACCAGCTC
TTTCACCCACTTCAACTTGATCCCCGTGGGGCTCCGTGTGGTCACCATTCAGAGTGCCAAGCTG
GGTCACTACATGGCCATGAATGCTGAGGGGCTTCTCTACAGCTCGCCACATTTCACAGCTGAGT
GTCGCTTTAAGGAGTGCGTCTTTGAGAATTACTATGTCCTGTACGCCTCTGCTCTCTACCGCCA
GCGCCGTTCTGGCCGGGCCTGGTACCTGGGCCTGGACAAAGAGGGCCGAGTCATGAAAGGCAAT
CGAGTCAAGAAGACCAAGGCAGCCGCCCACTTTGTGCCCAAGCTCCTGGAAGTGGCCATGTACC
GGGAGCCTTCTCTCCACAGTGTCCCTGAGACCTCCCCTTCCAGTCCCCCTGCCCCCTGAAATGT
AGTCCCTGGACTGGAGGCTCCCTGCACTCACACCGAGCCAGCCAGCCACCACCCCAGCCCTGCT
CCTGGCCCTGCTCTCACCCCTGCTGCCACACTCATGCCCTCAGCAGCCAGGTCCCACCAGGTGC
TCTAATCTGAGGGAGCCCAGGGGCTGGCTCTGACTTCCGGAGCCGCCAAGACTCTTAGATCCTG
GGATCTGGGAGGGGGCTCAGAGAGGGGATTGTCTGAAAATGGTCCTGGCTGATCCGTTCTTTCC
TCCCACACCCACACCATCCAAAGCCTTCCCCCAAGATGGCACTGGGGGTTCCCAAACTGACAGA
ACCAGGGCATAAATCCTCCCCACTATGGGCTTGGCCACTTCCTGGAGCCCTTTGCCCGTTCCAT
TGCTACTGAGCCATAGATTTTTAGGTCCACTGGAGCTCAGGATTCCTTTCCTTCTTGCCCTACT
CCACCTTCTGCCTTGTTCTGGACCGGTTCTGGAATATTCAGGCTCCCCAGCCAGGGCCATTTCT
GCACTCAGGCTCTGTGCTGGAACACAGGCATGCTGCCAGGCTCTGTTCTGGATCCATCATGCTT
CTATCCTTGACCCAGATGGACCCCTGGTTTCCAAGTAGAGAGAGGCTGGATTTAAGCCCTGTCC
AGCTGTTGGCCTTGGCCTGCACTGGGACCAGTCTCAGATCACCATAGGTTTAACTTTCTTATCC
CAGAGACACCCAATTCCAGAGCATGTGTTCTAGACACATATGGAGCCATACTTCCTTCTGAATC
TCAGCTCTAGGACATAGACCACGACTCTCAGCCCTTCCCGCTGTGATGGAACTGAGGCCTCTAT
AGCCATGTTATTGCTTTAAAATAAGTTCTAGGCCCACCCTCTCCCCTTCTCTAGTGATGCCTGT
TAAGGATGAGCTCTGGAAAGGACCCAGCTATGATTCACAAAGAACGAAGTTCTGGATAAATCAA
GAACCATTTCTTGTTTTTCCTAGATAATTTTTTAAAAATCTTCTTCCTCTAGAATGCTAACCTT
ATTTTTACATGCAGTTTTTAGCTCCTGCAACTCAGCTGGGGTCCTGCCAGGGAGACAGAGTCTG
AGGAAGGGCAGAGGAGTTTTGGAAGGATCCCTGGCTCATAGTAGGGAAGCTAGGATGGGGAAGG
GGCCAGAACCATGCATGATTGGACCTGTGCCTGGGTTATGGGGATGTGAACACTTAGCTACCTC
AGCAGGAATTCCTTCCAGGTCCCTTTTAAAGCTGAGGTCTTTAGGGTAACTGGTCTAGAATAAA
AAAGACAAATGAGGAGTTCCCGTTGTGGCCCAGTGGTTAACGAACCCAACTAGTAACCATGAGG
TTGGGGGTTCGATCCCTGGCCTTGCTCAGTGGGTTAAGGATCCGGCATTGCCCTGAGCTGTGGT
GTGGGTCGTAGACACGGCACACGGATCCTGCGTTGCTGTGGCTCTGGTGTAGGCCGGCAGCTAC
AGCTCCGATTCGACCCCTAGCCTGGGAACCTCCATGTGCCGTGGGCGCAGCCCTCAAAAGACAA
AAGACAAAAAAAAAAAAAAAAAAAAACAACCAAAAAACAAATGAGAGGAGTTCCCGTTGTGGCT
CAGAGCCTAAGAACCCGCCTAGTATCCATGAGGATTCAGGTTTGATCCCTGGCCTCACTCAGTG
GGTTGAGGATCCGGCATTGCTGCAAGCTGCAGTGTAGGTCACAGATGCAGCTTGGATCCTGAAT
TGCTGTGGCTGTGGCGTAGGCTGGCAGCTGCAGCTCCAATTCAACCCCTAGGCCGGGAACTTCC
ATATGCCGCGGGTACAGCCAAAAAAAAAAAAAAAAAAAAAAAAAGACAGATGGAACATAGCCAC
ACCCCCCTTTGCCACAGCAATGAAGTGATACCAGTTCAGCAATAAGTCCCATCCCTTGCCCCTA
CAGGTCAGGCCACGGAGGGAGGGTGAGGGCCTCTTCTCTAGACCTCATACATCCCAGAGCTTCT
TCTGAGTAGAACTTGCTTTATTTTACAGCCTATAATCTCAGCTGGGTTTTGGGTACCCAGAAAG
GGCCTGACTAGATTTTTCTGAAAAATATGGAGACCTAAGGGCAGGCCTGAAAAAGATCAGAGGT
CAGCAGAGAACTAGGAGGGAGGCTCTGAGTAACTTCAGACCTGGGCAAGGAAGACTGAGGGGGC
GCTAAAGGGAGGGCCTGGGGCTCAGAGGCAGGTCACTTTTCCTCAGGCTCTTTCTACTTCTGGC
TTGTTGCAAGAGGGGTGGATGCTCCCCTCACCCACACAGAACCCCGCTCAGGCTCCACCCATCT
CCTGGCTCTGCTCCCCAGGGACCGGGTCTCCACTCCATGCTTTCTCAATTAAAGATTAAAGACG
ATTTATACAACTGAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_013836765	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000061701.2
	ENSSSCP00000070350.2
	ENSSSCP00015023731.1
	ENSSSCP00015023788.1
	ENSSSCP00015023836.1
	ENSSSCP00015023958.1
	ENSSSCP00015024000.1
	ENSSSCP00025039071.1
	ENSSSCP00025039113.1
	ENSSSCP00025039176.1
	ENSSSCP00025039272.1
	ENSSSCP00025039333.1
	ENSSSCP00030048888.1
	ENSSSCP00030048890.1
	ENSSSCP00030048893.1
	ENSSSCP00030048898.1
	ENSSSCP00030048902.1
	ENSSSCP00035029967.1
	ENSSSCP00035029971.1
	ENSSSCP00035029972.1
	ENSSSCP00035029980.1
	ENSSSCP00035029984.1
	ENSSSCP00040010934.1
	ENSSSCP00040010954.1
	ENSSSCP00040010962.1
	ENSSSCP00040010977.1
	ENSSSCP00045036989.1
	ENSSSCP00045037050.1
	ENSSSCP00045037104.1
	ENSSSCP00045037141.1
	ENSSSCP00045037247.1
	ENSSSCP00045037335.1
	ENSSSCP00050003425.1
	ENSSSCP00050003428.1
	ENSSSCP00050003431.1
	ENSSSCP00050003435.1
	ENSSSCP00050003436.1
	ENSSSCP00055020625.1
	ENSSSCP00055020666.1
	ENSSSCP00055020698.1
	ENSSSCP00055020726.1
	ENSSSCP00055020775.1
	ENSSSCP00055020830.1
	ENSSSCP00060027450.1
	ENSSSCP00060027452.1
	ENSSSCP00060027454.1
	ENSSSCP00060027457.1
	ENSSSCP00060027459.1
	ENSSSCP00065033498.1
	ENSSSCP00065033502.1
	ENSSSCP00065033505.1
	ENSSSCP00065033506.1
	ENSSSCP00070035967.1
	ENSSSCP00070035973.1

RefSeq Acc Id:

XP_013836765 ⟸ XM_013981311

- UniProtKB:

A0A287BK28 (UniProtKB/TrEMBL), A0A4X1V2Z2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAALASSLIRQKREVREPGGSRPVSAQRRVCPRGTKSLCQKQLLILLSKVRLCGGRPARPDRGP
EPQLKGIVTKLFCRQGFYLQANPDGSIQGTPEDTSSFTHFNLIPVGLRVVTIQSAKLGHYMAMN
AEGLLYSSPHFTAECRFKECVFENYYVLYASALYRQRRSGRAWYLGLDKEGRVMKGNRVKKTKA
AAHFVPKLLEVAMYREPSLHSVPETSPSSPPAP

hide sequence

Ensembl Acc Id:

ENSSSCP00000061701 ⟸ ENSSSCT00000078649

Ensembl Acc Id:

ENSSSCP00000070350 ⟸ ENSSSCT00000078202

Protein Domains

Neurotransmitter-gated ion-channel ligand-binding Neurotransmitter-gated ion-channel transmembrane

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000051794	Ensembl, UniProtKB/TrEMBL
	ENSSSCG00015043811	UniProtKB/TrEMBL
	ENSSSCG00025065046	UniProtKB/TrEMBL
	ENSSSCG00030074868	UniProtKB/TrEMBL
	ENSSSCG00035055404	UniProtKB/TrEMBL
	ENSSSCG00040019155	UniProtKB/TrEMBL
	ENSSSCG00045031184	UniProtKB/TrEMBL
	ENSSSCG00050005917	UniProtKB/TrEMBL
	ENSSSCG00055013176	UniProtKB/TrEMBL
	ENSSSCG00060047141	UniProtKB/TrEMBL
	ENSSSCG00065056298	UniProtKB/TrEMBL
	ENSSSCG00070021507	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000078202.2	UniProtKB/TrEMBL
	ENSSSCT00000078649.2	UniProtKB/TrEMBL
	ENSSSCT00015059018.1	UniProtKB/TrEMBL
	ENSSSCT00015059124.1	UniProtKB/TrEMBL
	ENSSSCT00015059239.1	UniProtKB/TrEMBL
	ENSSSCT00015059582.1	UniProtKB/TrEMBL
	ENSSSCT00015059660.1	UniProtKB/TrEMBL
	ENSSSCT00025089308.1	UniProtKB/TrEMBL
	ENSSSCT00025089396.1	UniProtKB/TrEMBL
	ENSSSCT00025089515.1	UniProtKB/TrEMBL
	ENSSSCT00025089722.1	UniProtKB/TrEMBL
	ENSSSCT00025089849.1	UniProtKB/TrEMBL
	ENSSSCT00030105175.1	UniProtKB/TrEMBL
	ENSSSCT00030105177.1	UniProtKB/TrEMBL
	ENSSSCT00030105180.1	UniProtKB/TrEMBL
	ENSSSCT00030105185.1	UniProtKB/TrEMBL
	ENSSSCT00030105189.1	UniProtKB/TrEMBL
	ENSSSCT00035073899.1	UniProtKB/TrEMBL
	ENSSSCT00035073910.1	UniProtKB/TrEMBL
	ENSSSCT00035073913.1	UniProtKB/TrEMBL
	ENSSSCT00035073932.1	UniProtKB/TrEMBL
	ENSSSCT00035073944.1	UniProtKB/TrEMBL
	ENSSSCT00040025861.1	UniProtKB/TrEMBL
	ENSSSCT00040025901.1	UniProtKB/TrEMBL
	ENSSSCT00040025917.1	UniProtKB/TrEMBL
	ENSSSCT00040025951.1	UniProtKB/TrEMBL
	ENSSSCT00045053176.1	UniProtKB/TrEMBL
	ENSSSCT00045053266.1	UniProtKB/TrEMBL
	ENSSSCT00045053353.1	UniProtKB/TrEMBL
	ENSSSCT00045053411.1	UniProtKB/TrEMBL
	ENSSSCT00045053566.1	UniProtKB/TrEMBL
	ENSSSCT00045053683.1	UniProtKB/TrEMBL
	ENSSSCT00050008039.1	UniProtKB/TrEMBL
	ENSSSCT00050008048.1	UniProtKB/TrEMBL
	ENSSSCT00050008056.1	UniProtKB/TrEMBL
	ENSSSCT00050008060.1	UniProtKB/TrEMBL
	ENSSSCT00050008066.1	UniProtKB/TrEMBL
	ENSSSCT00055025952.1	UniProtKB/TrEMBL
	ENSSSCT00055026003.1	UniProtKB/TrEMBL
	ENSSSCT00055026045.1	UniProtKB/TrEMBL
	ENSSSCT00055026085.1	UniProtKB/TrEMBL
	ENSSSCT00055026152.1	UniProtKB/TrEMBL
	ENSSSCT00055026214.1	UniProtKB/TrEMBL
	ENSSSCT00060064001.1	UniProtKB/TrEMBL
	ENSSSCT00060064003.1	UniProtKB/TrEMBL
	ENSSSCT00060064014.1	UniProtKB/TrEMBL
	ENSSSCT00060064022.1	UniProtKB/TrEMBL
	ENSSSCT00060064025.1	UniProtKB/TrEMBL
	ENSSSCT00065077057.1	UniProtKB/TrEMBL
	ENSSSCT00065077068.1	UniProtKB/TrEMBL
	ENSSSCT00065077072.1	UniProtKB/TrEMBL
	ENSSSCT00065077076.1	UniProtKB/TrEMBL
	ENSSSCT00070042764.1	UniProtKB/TrEMBL
	ENSSSCT00070042773.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.58.390	UniProtKB/TrEMBL
	2.70.170.10	UniProtKB/TrEMBL
	2.80.10.50	UniProtKB/TrEMBL
InterPro	Fibroblast_GF_fam	UniProtKB/TrEMBL
	IL1/FGF	UniProtKB/TrEMBL
	Neur_chan_lig-bd	UniProtKB/TrEMBL
	Neur_chan_lig-bd_sf	UniProtKB/TrEMBL
	Neur_channel	UniProtKB/TrEMBL
	Neuro-gated_channel_TM_sf	UniProtKB/TrEMBL
	Neuro_actylchol_rec	UniProtKB/TrEMBL
	Neurotrans-gated_channel_TM	UniProtKB/TrEMBL
	Neurotransmitter_ion_chnl_CS	UniProtKB/TrEMBL
	Nicotinic_acetylcholine_rcpt	UniProtKB/TrEMBL
KEGG Report	ssc:100739797	UniProtKB/TrEMBL
NCBI Gene	FGF11	ENTREZGENE
PANTHER	ACETYLCHOLINE RECEPTOR SUBUNIT BETA	UniProtKB/TrEMBL
	PTHR11486	UniProtKB/TrEMBL
	PTHR11486:SF67	UniProtKB/TrEMBL
	PTHR18945	UniProtKB/TrEMBL
Pfam	FGF	UniProtKB/TrEMBL
	Neur_chan_LBD	UniProtKB/TrEMBL
	Neur_chan_memb	UniProtKB/TrEMBL
PRINTS	HBGFFGF	UniProtKB/TrEMBL
	IL1HBGF	UniProtKB/TrEMBL
	NICOTINICR	UniProtKB/TrEMBL
	NRIONCHANNEL	UniProtKB/TrEMBL
PROSITE	HBGF_FGF	UniProtKB/TrEMBL
	NEUROTR_ION_CHANNEL	UniProtKB/TrEMBL
SMART	FGF	UniProtKB/TrEMBL
Superfamily-SCOP	SSF50353	UniProtKB/TrEMBL
	SSF63712	UniProtKB/TrEMBL
	SSF90112	UniProtKB/TrEMBL
UniProt	A0A287BK28	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1V2Z2	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1V4A7_PIG	UniProtKB/TrEMBL
	A0A5G2QDK0_PIG	UniProtKB/TrEMBL
	A0A5G2R1X5_PIG	UniProtKB/TrEMBL
	A0A8D0U4D9_PIG	UniProtKB/TrEMBL
	A0A8D0YGD9_PIG	UniProtKB/TrEMBL
	A0A8D1AES4_PIG	UniProtKB/TrEMBL
	A0A8D1CJC4_PIG	UniProtKB/TrEMBL
	A0A8D1CYK3_PIG	UniProtKB/TrEMBL
	A0A8D1U1X0_PIG	UniProtKB/TrEMBL
	A0A8D1VQ66_PIG	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar