IFN-DELTA-10 (interferon-delta-10) - Rat Genome Database

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Gene: IFN-DELTA-10 (interferon-delta-10) Sus scrofa
Analyze
Symbol: IFN-DELTA-10
Name: interferon-delta-10
RGD ID: 14286776
Description: ENCODES a protein that exhibits cytokine activity (inferred); cytokine receptor binding (inferred); INVOLVED IN defense response (inferred); defense response to virus (inferred); signal transduction (inferred); FOUND IN extracellular region (inferred); extracellular space (inferred)
Type: protein-coding
RefSeq Status: PREDICTED
Previously known as: uncharacterized protein LOC100152129
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1201,702,826 - 201,703,341 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11201,702,826 - 201,703,341 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21225,147,171 - 225,147,686 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:20406849   PMID:22301074   PMID:30032202  


Genomics

Variants

.
Variants in IFN-DELTA-10
2 total Variants

Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSSSCT00000101576   ⟹   ENSSSCP00000077639
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1201,702,826 - 201,703,341 (+)Ensembl
RefSeq Acc Id: NM_001165907   ⟹   NP_001159379
RefSeq Status: PREDICTED
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11201,702,826 - 201,703,341 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001159379 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein ACV42418 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000077639
  ENSSSCP00000077639.1
  ENSSSCP00025015587.1
  ENSSSCP00025032778.1
  ENSSSCP00030031736.1
  ENSSSCP00055007425.1
  ENSSSCP00055010662.1
Reference Protein Sequences
RefSeq Acc Id: NP_001159379   ⟸   NM_001165907
- Peptide Label: precursor
- UniProtKB: C8CKC0 (UniProtKB/TrEMBL),   A0A8D1PQZ3 (UniProtKB/TrEMBL),   A0A8D0SWS7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000077639   ⟸   ENSSSCT00000101576


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000057852 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00025027474 UniProtKB/TrEMBL
  ENSSSCG00025055275 UniProtKB/TrEMBL
  ENSSSCG00030049875 UniProtKB/TrEMBL
  ENSSSCG00055004740 UniProtKB/TrEMBL
  ENSSSCG00055006996 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000101576 ENTREZGENE
  ENSSSCT00000101576.1 UniProtKB/TrEMBL
  ENSSSCT00025037223.1 UniProtKB/TrEMBL
  ENSSSCT00025075616.1 UniProtKB/TrEMBL
  ENSSSCT00030069538.1 UniProtKB/TrEMBL
  ENSSSCT00055009348.1 UniProtKB/TrEMBL
  ENSSSCT00055013549.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1250.10 UniProtKB/TrEMBL
InterPro 4_helix_cytokine-like_core UniProtKB/TrEMBL
  Interferon_alpha/beta/delta UniProtKB/TrEMBL
KEGG Report ssc:100152129 UniProtKB/TrEMBL
NCBI Gene IFN-DELTA-10 ENTREZGENE
PANTHER INTERFERON 1GA2 UniProtKB/TrEMBL
  PTHR11691 UniProtKB/TrEMBL
Pfam Interferon UniProtKB/TrEMBL
PRINTS INTERFERONAB UniProtKB/TrEMBL
PROSITE INTERFERON_A_B_D UniProtKB/TrEMBL
SMART IFabd UniProtKB/TrEMBL
Superfamily-SCOP SSF47266 UniProtKB/TrEMBL
UniProt A0A8D0SWS7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1PQZ3 ENTREZGENE, UniProtKB/TrEMBL
  C8CKC0 ENTREZGENE, UniProtKB/TrEMBL