ABCB9 (ATP binding cassette subfamily B member 9)

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Gene: ABCB9 (ATP binding cassette subfamily B member 9) Sus scrofa

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Symbol:

ABCB9

Name:

ATP binding cassette subfamily B member 9

RGD ID:

14285356

Description:

ENCODES a protein that exhibits ABC-type oligopeptide transporter activity (inferred); ABC-type peptide transporter activity (inferred); ABC-type transporter activity (inferred); INVOLVED IN antigen processing and presentation of peptide antigen via MHC class I (ortholog); ASSOCIATED WITH short chain acyl-CoA dehydrogenase deficiency (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); INTERACTS WITH deoxynivalenol

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

ATP-binding cassette sub-family B member 9

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	29,904,174 - 29,935,560 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	29,895,752 - 29,935,571 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	31,583,965 - 31,624,411 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

short chain acyl-CoA dehydrogenase deficiency (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

deoxynivalenol (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

antigen processing and presentation of peptide antigen via MHC class I (ISO)

oligopeptide transmembrane transport (IEA)

peptide metabolic process (IEA)

peptide transport (IEA)

transmembrane transport (IBA,IEA)

Cellular Component

early endosome (ISO)

endoplasmic reticulum (ISO)

endoplasmic reticulum membrane (IEA)

intracellular membrane-bounded organelle (IEA)

lysosomal membrane (IEA)

lysosome (IEA)

membrane (IBA,IEA)

Molecular Function

ABC-type oligopeptide transporter activity (IEA)

ABC-type peptide transporter activity (IEA)

ABC-type transporter activity (IEA)

ATP binding (IEA)

ATP hydrolysis activity (IEA)

ATPase-coupled transmembrane transporter activity (IBA)

protein binding (ISO)

protein homodimerization activity (IEA)

transmembrane transporter activity (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

ABCB9
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	29,904,174 - 29,935,560 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	29,895,752 - 29,935,571 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	31,583,965 - 31,624,411 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ABCB9
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	122,918,610 - 122,975,114 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	122,920,951 - 122,981,649 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	12	123,405,495 - 123,451,010 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	121,979,492 - 122,025,705 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	12	121,938,426 - 121,975,912	NCBI
Celera	12	123,006,335 - 123,052,545 (-)	NCBI		Celera
Cytogenetic Map	12	q24.31	NCBI
HuRef	12	120,366,970 - 120,412,196 (-)	NCBI		HuRef
CHM1_1	12	123,373,795 - 123,419,356 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	12	122,913,851 - 122,971,746 (-)	NCBI		T2T-CHM13v2.0

Abcb9
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	124,199,920 - 124,234,009 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	124,199,593 - 124,233,861 (-)	Ensembl		GRCm39 Ensembl
GRCm38	5	124,061,857 - 124,095,955 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	124,061,530 - 124,095,798 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	124,511,866 - 124,545,807 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	124,322,475 - 124,356,416 (-)	NCBI		MGSCv36	mm8
Celera	5	121,138,027 - 121,171,950 (-)	NCBI		Celera
Cytogenetic Map	5	F	NCBI
cM Map	5	63.36	NCBI

Abcb9
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	38,146,659 - 38,192,862 (+)	NCBI		GRCr8
mRatBN7.2	12	32,499,213 - 32,531,932 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	32,499,225 - 32,531,931 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	12	33,679,102 - 33,711,093 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	34,290,446 - 34,322,433 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	33,342,345 - 33,374,330 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	37,923,974 - 37,956,678 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	37,923,528 - 37,958,363 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	12	39,796,337 - 39,829,041 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	12	33,623,383 - 33,656,242 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	12	33,486,770 - 33,519,630 (+)	NCBI
Celera	12	34,193,059 - 34,220,212 (+)	NCBI		Celera
Cytogenetic Map	12	q15	NCBI

Abcb9
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955482	5,817,334 - 5,837,220 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955482	5,817,334 - 5,838,642 (+)	NCBI	ChiLan1.0	ChiLan1.0

ABCB9
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	131,002,775 - 131,071,199 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	131,011,036 - 131,067,575 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	120,523,592 - 120,573,322 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	124,768,225 - 124,816,346 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	124,760,277 - 124,815,853 (-)	Ensembl	panpan1.1		panPan2

VPS37B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	26	6,594,981 - 6,621,902 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	26	6,595,030 - 6,620,408 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	26	6,756,791 - 6,783,698 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	26	6,844,105 - 6,871,052 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	26	6,844,140 - 6,871,052 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	26	6,776,943 - 6,803,891 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	26	6,869,672 - 6,896,611 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	26	6,823,302 - 6,850,224 (+)	NCBI		UU_Cfam_GSD_1.0

Abcb9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	157,761,120 - 157,789,628 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936558	1,689,388 - 1,718,869 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936558	1,689,832 - 1,718,306 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ABCB9
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	118,269,654 - 118,308,703 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	118,269,655 - 118,308,764 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666037	126,998,033 - 127,043,807 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Abcb9
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624747	22,952,120 - 22,971,267 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624747	22,952,518 - 22,971,525 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in ABCB9
818 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	3	23	3	2	5	11	9	23	2	3	3

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_001928591	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021074072	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000096	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU467951	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01105697	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000010726 ⟹ ENSSSCP00000010446

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	14	29,904,174 - 29,935,560 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000022892 ⟹ ENSSSCP00000022426

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	14	29,904,174 - 29,935,560 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000072828 ⟹ ENSSSCP00000060950

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	14	29,895,770 - 29,935,563 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000074844 ⟹ ENSSSCP00000074200

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	14	29,904,174 - 29,935,560 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000084642 ⟹ ENSSSCP00000062326

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	14	29,904,221 - 29,933,600 (+)	Ensembl

RefSeq Acc Id:

XM_001928591 ⟹ XP_001928626

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	14	29,904,175 - 29,935,571 (+)	NCBI

Sequence:

show sequence

TTGCTGCGGCTCAGCCCTGGAGGCAGGGAGGAGCGGGCGGGAGGAGGGAGCGGCGGGAGCAGCT
GAGCGTCAGGACGCAGTCTCCAATGAGCCCCACGGAATCTGCGCTCCTGAGGACCCTAGCCAGC
TGTGCCCACTCCCCACAACTCACCTGGTGCCAGATCTGGCCTCACTCCACAGACAATGGCTTTG
CCCCCGTGAGCTAGAGCCTGCCCCTCGGTGCCTGCCTGCCTGCCTCCCGCCAGCAGGATGCAGC
TGTGGAAGGCAGTGGCGGTGACCCTGGCCTTCATGAGCATGGACGTCGGCTTGACCACAGCCAT
CTACGTGCTCAGCCACCGGGACCGCAGCCTGCTGGAGGATATCCGCCACTTCAACATCTTTGAC
TCGGTGCTGGACCTCTGGGCGGCCTGCCTGTACCGCAGCTGCCTGCTGCTGGGGGCCACCATCG
GTGTGGCCAAGAACAGCGCCCTGGGGCCCCGGCGGCTGCGGGCTTCGTGGACGGTCATCGCCCT
CGTGTGCCTCTTCGGGGGCATCTACACCATGGTGAAGCTGCTGCTCTTCTCCGAGGTACGCAAG
CCGGTCCGGGACCCGTGGTTCTGGGCCCTCTTCGTGTGGACCTACCTCTCACTCGCTGCCTCCT
TCCTGCTCTGGTGGCTGCTGTCCACTGTGCTGCCCAACGCCAAGGCCCTCGAGCGGGGGGCAGG
CACCGAGCCCGAGGCAGAGGGCTTCCCCAGGGAGGACCAGCCCCCGGCCGAGCAGGCGTCCGGG
GCCACGCTGCAGAAGCTGCTGTCCTACACGAAGCCCGACATAGCCTTCCTGGTGGCAGCCTCCT
TCTTCCTCATCGTGGCGGCTCTGGGAGAGACCTTCCTCCCCTACTACACCGGCCGGGCCATCGA
CGGCATCGTCATCCAGAAGAGCATGGAGCAGTTCAGCACGGCGGTCATTGTCATGTGTGCACTG
GCCATCGGCAGCTCATTTGCCGCAGGTATTCGGGGCGGCATTTTTACCCTCATATTTGCCAGAC
TGAACATTCGCCTTCGCAACCGTCTCTTCCGCTCGCTGGTGTCTCAGGAAACAAGCTTCTTTGA
TGAGAATCGCACAGGGGACCTCATCTCCCGCCTCACCTCGGACACCACAATGGTTAGCGACCTG
GTCTCCCAGAATATCAACATCTTCCTGCGGAACACGGTCAAGGTCACGGGCGTGGTGGTCTTCA
TGTTCAGCCTCTCGTGGCAGCTCTCCTTGGTCACCTTCATGGGCTTTCCCATCATCATGATGGT
GTCTGACATCTACGGCAAGTATTACAAGAGGCTCTCTAAAGAGGTCCAGAATGCCCTGGCCAGA
GCCAGCAGCACGGCCGAGGAGACCATCAGCGCCATGAAGACAGTGCGCAGCTTTGCCAACGAGG
AGGAGGAGGCGGAGGTGTACTCGCGGAAGCTGCAGCAGGTGTACAAGCTGAACAGGAAGGAGGC
CGCAGCCTACACGTACTATGTCTGGGGCAGCGGGCTCACGCTGCTGGTGGTCCAGGTCAGCATT
CTCTACTACGGGGGCCACCTCGTCATCTCGGGGCAGATGACCAGCGGCAATCTCATCTCCTTCA
TTATCTACGAGTTTGTGCTGGGAGATTGTATGGAGTCTGTGGGCTCCGTCTATAGTGGCCTGAT
GCAAGGAGTGGGAGCTGCAGAAAAGGTGTTCGAGTTCATTGACCGGCAGCCAACCATGGTGCAT
GATGGGAACTTGGCCCCTGACCACCTGGAGGGCCGGGTGGACTTTGAGAACGTGACTTTCACCT
ACCGCACTCGGCCCCACACCCAAGTCCTACAGAATGTCTCCTTCAGCCTGTCCCCAGGAAAGGT
GACTGCACTTGTGGGGCCATCGGGCAGTGGGAAGAGCTCCTGTGTCAACATTCTGGAGAACTTC
TACCCCTTGGAGGGGGGCCGTGTGCTGCTGGATGGGAAGCCCATCAGCGCCTATGACCACAAGT
ACTTGCACCGAGCGATCTCCCTGGTGAGCCAGGAGCCAGTGCTGTTTGCCCGCTCCATCACAGA
CAACATCTCCTATGGCCTGCCCACCGTGCCCTTCGAGATGGTGGTAGAAGCTGCACAGAAGGCA
AATGCCCACGGCTTCATCATGGAGCTCCAGGACGGCTACAATACAGAGACAGGGGAGAAAGGCG
CCCAGTTGTCAGGTGGCCAGAAGCAGCGGGTGGCCATGGCCCGAGCTCTGGTGCGGAACCCACC
CGTTCTCATCCTGGATGAAGCCACCAGCGCCCTGGATGCAGAGAGCGAGTACCTGATCCAGCAG
GCCATCCACGGCAACCTGCAGAAGCACACAGTGCTCATCATCGCGCACCGGCTGAGCACAGTGG
AGCGGGCGCACCTCATCGTGGTGCTGGACAAGGGCCGAGTCGTGCAGCAGGGCACCCACCAGCA
GCTGCTGGCACAGGGCGGCCTCTACGCCAAGCTGGTGCAGCGGCAGATGCTGGGGCTCGAGCCC
GCCTCAGACTACACAGCCGGCCACCAGGAAACGCCAGGCAATGGCAATCACAAGGCCTGACCAT
GGCCCCACCTCTCCCAGTGGGGCAGAGGCCCCAGTGCCCGCCTGGCAGATGGGCCCATGGTGGG
GGAGGAGGGCCTCACCACCCCCACTGCCCTCTGAGCCCAGGCCCAAGGCACTGGAGGGCCACCT
GCCCTGTCCCACATGTCACTGCTTCCTGCACCTTGCCCCCAGTTCCCACCCTGTTCCCCGGGCC
ACCACCAGCCCCCTGCTGCCGTGAGCCACCCCCTCCAGTCTTGGTGGTGGAGATACCGCTGTTT
TCTCCATCTGGCTCCCAAGGCTGCTAAGCGAAGGTAGAGCTACCTTTTTAAACCAAGATCTTAA
CCAGATTTTTTACTGCTTGGTTTGATGGGCCCCAGTCATCTCCTAGATTTCAAAAACGTTTTTC
TAATTGGGAGTAATGACTGGCAAGTTCACCAAGACATTCTAGAAACTTCTGAGCCGGGAGCGTA
TGACCCTTCCTCAGAGCCTGGGGGACATCAGGGGAGTATGCAGCCTCTACCCTTTGCCCCTGGA
GAGAAGGGGCTCCCCATCCCAGGCGGGGGACTTCCTGTCTCTTGCTCTTCCCAGCTTCGTGAGT
CAGGCCAAGGGTGGGCGGGAGTGGAAGGCTCCTGCCTGCCCAGATCTAAGCCAGTCTCACTGTG
AACCACTACCAACCTTAACTGGGGGAGTGAGGGGCTGGCCAGGCCTGGCGAAGCCTCGGGGTGT
CCCCAGCCCAGCACCCAGCTTGAGCCCCTCCCCCTGCCTTGCCCCTCCCTCCCCCCACCCCGGC
TGGCGGCCCCTTCCCAACGATGACAGTCACCTCGACGCCCTTCGGATGTTTGGGAGACGCATTC
TCTTCCCTGTCTGATGGACAGGATGCTGGCAAAGCCTAGGTCTGGCTTTGTGGGGGGAGGGGGG
TGTTGCAAGATGTTGGGAGAACCGGTCAATAAAGTATACTACCTCTGACCCCTGA

hide sequence

RefSeq Acc Id:

XM_021074072 ⟹ XP_020929731

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	14	29,895,752 - 29,935,571 (+)	NCBI

Sequence:

show sequence

CCTAGAGTGCCTTCCGTGGCTCAGCATGGTGCGTGGATGGGGATAGGAAGGAAGAACGGGGCTT
CAAGACTCCAGCTCTTAACCCCAGCAATGAGTGAGAGTTCCTGTTACTCCACATATTCGTCAGC
ATTTGATATTGTCAGTGTTTTGGATTTGGCCATTCTTTTAGATCTGGCCTCACTCCACAGACAA
TGGCTTTGCCCCCGTGAGCTAGAGCCTGCCCCTCGGTGCCTGCCTGCCTGCCTCCCGCCAGCAG
GATGCAGCTGTGGAAGGCAGTGGCGGTGACCCTGGCCTTCATGAGCATGGACGTCGGCTTGACC
ACAGCCATCTACGTGCTCAGCCACCGGGACCGCAGCCTGCTGGAGGATATCCGCCACTTCAACA
TCTTTGACTCGGTGCTGGACCTCTGGGCGGCCTGCCTGTACCGCAGCTGCCTGCTGCTGGGGGC
CACCATCGGTGTGGCCAAGAACAGCGCCCTGGGGCCCCGGCGGCTGCGGGCTTCGTGGACGGTC
ATCGCCCTCGTGTGCCTCTTCGGGGGCATCTACACCATGGTGAAGCTGCTGCTCTTCTCCGAGG
TACGCAAGCCGGTCCGGGACCCGTGGTTCTGGGCCCTCTTCGTGTGGACCTACCTCTCACTCGC
TGCCTCCTTCCTGCTCTGGTGGCTGCTGTCCACTGTGCTGCCCAACGCCAAGGCCCTCGAGCGG
GGGGCAGGCACCGAGCCCGAGGCAGAGGGCTTCCCCAGGGAGGACCAGCCCCCGGCCGAGCAGG
CGTCCGGGGCCACGCTGCAGAAGCTGCTGTCCTACACGAAGCCCGACATAGCCTTCCTGGTGGC
AGCCTCCTTCTTCCTCATCGTGGCGGCTCTGGGAGAGACCTTCCTCCCCTACTACACCGGCCGG
GCCATCGACGGCATCGTCATCCAGAAGAGCATGGAGCAGTTCAGCACGGCGGTCATTGTCATGT
GTGCACTGGCCATCGGCAGCTCATTTGCCGCAGGTATTCGGGGCGGCATTTTTACCCTCATATT
TGCCAGACTGAACATTCGCCTTCGCAACCGTCTCTTCCGCTCGCTGGTGTCTCAGGAAACAAGC
TTCTTTGATGAGAATCGCACAGAAGGGGACCTCATCTCCCGCCTCACCTCGGACACCACAATGG
TTAGCGACCTGGTCTCCCAGAATATCAACATCTTCCTGCGGAACACGGTCAAGGTCACGGGCGT
GGTGGTCTTCATGTTCAGCCTCTCGTGGCAGCTCTCCTTGGTCACCTTCATGGGCTTTCCCATC
ATCATGATGGTGTCTGACATCTACGGCAAGTATTACAAGAGGCTCTCTAAAGAGGTCCAGAATG
CCCTGGCCAGAGCCAGCAGCACGGCCGAGGAGACCATCAGCGCCATGAAGACAGTGCGCAGCTT
TGCCAACGAGGAGGAGGAGGCGGAGGTGTACTCGCGGAAGCTGCAGCAGGTGTACAAGCTGAAC
AGGAAGGAGGCCGCAGCCTACACGTACTATGTCTGGGGCAGCGGGCTCACGCTGCTGGTGGTCC
AGGTCAGCATTCTCTACTACGGGGGCCACCTCGTCATCTCGGGGCAGATGACCAGCGGCAATCT
CATCTCCTTCATTATCTACGAGTTTGTGCTGGGAGATTGTATGGAGTCTGTGGGCTCCGTCTAT
AGTGGCCTGATGCAAGGAGTGGGAGCTGCAGAAAAGGTGTTCGAGTTCATTGACCGGCAGCCAA
CCATGGTGCATGATGGGAACTTGGCCCCTGACCACCTGGAGGGCCGGGTGGACTTTGAGAACGT
GACTTTCACCTACCGCACTCGGCCCCACACCCAAGTCCTACAGAATGTCTCCTTCAGCCTGTCC
CCAGGAAAGGTGACTGCACTTGTGGGGCCATCGGGCAGTGGGAAGAGCTCCTGTGTCAACATTC
TGGAGAACTTCTACCCCTTGGAGGGGGGCCGTGTGCTGCTGGATGGGAAGCCCATCAGCGCCTA
TGACCACAAGTACTTGCACCGAGCGATCTCCCTGGTGAGCCAGGAGCCAGTGCTGTTTGCCCGC
TCCATCACAGACAACATCTCCTATGGCCTGCCCACCGTGCCCTTCGAGATGGTGGTAGAAGCTG
CACAGAAGGCAAATGCCCACGGCTTCATCATGGAGCTCCAGGACGGCTACAATACAGAGACAGG
GGAGAAAGGCGCCCAGTTGTCAGGTGGCCAGAAGCAGCGGGTGGCCATGGCCCGAGCTCTGGTG
CGGAACCCACCCGTTCTCATCCTGGATGAAGCCACCAGCGCCCTGGATGCAGAGAGCGAGTACC
TGATCCAGCAGGCCATCCACGGCAACCTGCAGAAGCACACAGTGCTCATCATCGCGCACCGGCT
GAGCACAGTGGAGCGGGCGCACCTCATCGTGGTGCTGGACAAGGGCCGAGTCGTGCAGCAGGGC
ACCCACCAGCAGCTGCTGGCACAGGGCGGCCTCTACGCCAAGCTGGTGCAGCGGCAGATGCTGG
GGCTCGAGCCCGCCTCAGACTACACAGCCGGCCACCAGGAAACGCCAGGCAATGGCAATCACAA
GGCCTGACCATGGCCCCACCTCTCCCAGTGGGGCAGAGGCCCCAGTGCCCGCCTGGCAGATGGG
CCCATGGTGGGGGAGGAGGGCCTCACCACCCCCACTGCCCTCTGAGCCCAGGCCCAAGGCACTG
GAGGGCCACCTGCCCTGTCCCACATGTCACTGCTTCCTGCACCTTGCCCCCAGTTCCCACCCTG
TTCCCCGGGCCACCACCAGCCCCCTGCTGCCGTGAGCCACCCCCTCCAGTCTTGGTGGTGGAGA
TACCGCTGTTTTCTCCATCTGGCTCCCAAGGCTGCTAAGCGAAGGTAGAGCTACCTTTTTAAAC
CAAGATCTTAACCAGATTTTTTACTGCTTGGTTTGATGGGCCCCAGTCATCTCCTAGATTTCAA
AAACGTTTTTCTAATTGGGAGTAATGACTGGCAAGTTCACCAAGACATTCTAGAAACTTCTGAG
CCGGGAGCGTATGACCCTTCCTCAGAGCCTGGGGGACATCAGGGGAGTATGCAGCCTCTACCCT
TTGCCCCTGGAGAGAAGGGGCTCCCCATCCCAGGCGGGGGACTTCCTGTCTCTTGCTCTTCCCA
GCTTCGTGAGTCAGGCCAAGGGTGGGCGGGAGTGGAAGGCTCCTGCCTGCCCAGATCTAAGCCA
GTCTCACTGTGAACCACTACCAACCTTAACTGGGGGAGTGAGGGGCTGGCCAGGCCTGGCGAAG
CCTCGGGGTGTCCCCAGCCCAGCACCCAGCTTGAGCCCCTCCCCCTGCCTTGCCCCTCCCTCCC
CCCACCCCGGCTGGCGGCCCCTTCCCAACGATGACAGTCACCTCGACGCCCTTCGGATGTTTGG
GAGACGCATTCTCTTCCCTGTCTGATGGACAGGATGCTGGCAAAGCCTAGGTCTGGCTTTGTGG
GGGGAGGGGGGTGTTGCAAGATGTTGGGAGAACCGGTCAATAAAGTATACTACCTCTGACCCCT
GA

hide sequence

Protein Sequences


Protein RefSeqs	XP_001928626	(Get FASTA)	NCBI Sequence Viewer
	XP_020929731	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000010446
	ENSSSCP00000010446.2
	ENSSSCP00000022426.2
	ENSSSCP00000062326.2
	ENSSSCP00000074200.1
	ENSSSCP00015024228.1
	ENSSSCP00015024393.1
	ENSSSCP00015024425.1
	ENSSSCP00015024443.1
	ENSSSCP00015024473.1
	ENSSSCP00025010203.1
	ENSSSCP00025010218.1
	ENSSSCP00030003628.1
	ENSSSCP00030003631.1
	ENSSSCP00035025541.1
	ENSSSCP00035025542.1
	ENSSSCP00035025546.1
	ENSSSCP00035025553.1
	ENSSSCP00040022338.1
	ENSSSCP00040022452.1
	ENSSSCP00040022502.1
	ENSSSCP00040022535.1
	ENSSSCP00040022588.1
	ENSSSCP00045047828.1
	ENSSSCP00045047837.1
	ENSSSCP00045047847.1
	ENSSSCP00050000726.1
	ENSSSCP00050000740.1
	ENSSSCP00050000746.1
	ENSSSCP00050000748.1
	ENSSSCP00050000755.1
	ENSSSCP00055005173.1
	ENSSSCP00060001430.1
	ENSSSCP00060001436.1
	ENSSSCP00060001441.1
	ENSSSCP00060001445.1
	ENSSSCP00060001447.1
	ENSSSCP00060001448.1
	ENSSSCP00065025409.1
	ENSSSCP00065025415.1
	ENSSSCP00065025424.1
	ENSSSCP00070027358.1
	ENSSSCP00070027372.1
	ENSSSCP00070027385.1
	ENSSSCP00070027390.1

RefSeq Acc Id:	XP_020929731 ⟸ XM_021074072
- Peptide Label:	isoform X1
- UniProtKB:	A0A8D1PEQ5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQLWKAVAVTLAFMSMDVGLTTAIYVLSHRDRSLLEDIRHFNIFDSVLDLWAACLYRSCLLLGA TIGVAKNSALGPRRLRASWTVIALVCLFGGIYTMVKLLLFSEVRKPVRDPWFWALFVWTYLSLA ASFLLWWLLSTVLPNAKALERGAGTEPEAEGFPREDQPPAEQASGATLQKLLSYTKPDIAFLVA ASFFLIVAALGETFLPYYTGRAIDGIVIQKSMEQFSTAVIVMCALAIGSSFAAGIRGGIFTLIF ARLNIRLRNRLFRSLVSQETSFFDENRTEGDLISRLTSDTTMVSDLVSQNINIFLRNTVKVTGV VVFMFSLSWQLSLVTFMGFPIIMMVSDIYGKYYKRLSKEVQNALARASSTAEETISAMKTVRSF ANEEEEAEVYSRKLQQVYKLNRKEAAAYTYYVWGSGLTLLVVQVSILYYGGHLVISGQMTSGNL ISFIIYEFVLGDCMESVGSVYSGLMQGVGAAEKVFEFIDRQPTMVHDGNLAPDHLEGRVDFENV TFTYRTRPHTQVLQNVSFSLSPGKVTALVGPSGSGKSSCVNILENFYPLEGGRVLLDGKPISAY DHKYLHRAISLVSQEPVLFARSITDNISYGLPTVPFEMVVEAAQKANAHGFIMELQDGYNTETG EKGAQLSGGQKQRVAMARALVRNPPVLILDEATSALDAESEYLIQQAIHGNLQKHTVLIIAHRL STVERAHLIVVLDKGRVVQQGTHQQLLAQGGLYAKLVQRQMLGLEPASDYTAGHQETPGNGNHK A hide sequence

RefSeq Acc Id:	XP_001928626 ⟸ XM_001928591
- Peptide Label:	isoform X2
- UniProtKB:	F1RFJ4 (UniProtKB/TrEMBL), A0A4X1UBU7 (UniProtKB/TrEMBL), A0A8D1PEQ5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQLWKAVAVTLAFMSMDVGLTTAIYVLSHRDRSLLEDIRHFNIFDSVLDLWAACLYRSCLLLGA TIGVAKNSALGPRRLRASWTVIALVCLFGGIYTMVKLLLFSEVRKPVRDPWFWALFVWTYLSLA ASFLLWWLLSTVLPNAKALERGAGTEPEAEGFPREDQPPAEQASGATLQKLLSYTKPDIAFLVA ASFFLIVAALGETFLPYYTGRAIDGIVIQKSMEQFSTAVIVMCALAIGSSFAAGIRGGIFTLIF ARLNIRLRNRLFRSLVSQETSFFDENRTGDLISRLTSDTTMVSDLVSQNINIFLRNTVKVTGVV VFMFSLSWQLSLVTFMGFPIIMMVSDIYGKYYKRLSKEVQNALARASSTAEETISAMKTVRSFA NEEEEAEVYSRKLQQVYKLNRKEAAAYTYYVWGSGLTLLVVQVSILYYGGHLVISGQMTSGNLI SFIIYEFVLGDCMESVGSVYSGLMQGVGAAEKVFEFIDRQPTMVHDGNLAPDHLEGRVDFENVT FTYRTRPHTQVLQNVSFSLSPGKVTALVGPSGSGKSSCVNILENFYPLEGGRVLLDGKPISAYD HKYLHRAISLVSQEPVLFARSITDNISYGLPTVPFEMVVEAAQKANAHGFIMELQDGYNTETGE KGAQLSGGQKQRVAMARALVRNPPVLILDEATSALDAESEYLIQQAIHGNLQKHTVLIIAHRLS TVERAHLIVVLDKGRVVQQGTHQQLLAQGGLYAKLVQRQMLGLEPASDYTAGHQETPGNGNHKA hide sequence

Ensembl Acc Id:

ENSSSCP00000010446 ⟸ ENSSSCT00000010726

Ensembl Acc Id:

ENSSSCP00000074200 ⟸ ENSSSCT00000074844

Ensembl Acc Id:

ENSSSCP00000062326 ⟸ ENSSSCT00000084642

Ensembl Acc Id:

ENSSSCP00000022426 ⟸ ENSSSCT00000022892

Ensembl Acc Id:

ENSSSCP00000060950 ⟸ ENSSSCT00000072828

Protein Domains

ABC transmembrane type-1 ABC transporter

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000009784	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015044717	UniProtKB/TrEMBL
	ENSSSCG00025017790	UniProtKB/TrEMBL
	ENSSSCG00030006180	UniProtKB/TrEMBL
	ENSSSCG00035047439	UniProtKB/TrEMBL
	ENSSSCG00040039978	UniProtKB/TrEMBL
	ENSSSCG00045038770	UniProtKB/TrEMBL
	ENSSSCG00050001856	UniProtKB/TrEMBL
	ENSSSCG00055003359	UniProtKB/TrEMBL
	ENSSSCG00060003493	UniProtKB/TrEMBL
	ENSSSCG00065042889	UniProtKB/TrEMBL
	ENSSSCG00070016619	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000010726	ENTREZGENE
	ENSSSCT00000010726.5	UniProtKB/TrEMBL
	ENSSSCT00000022892.4	UniProtKB/TrEMBL
	ENSSSCT00000074844.2	UniProtKB/TrEMBL
	ENSSSCT00000084642.2	UniProtKB/TrEMBL
	ENSSSCT00015060235.1	UniProtKB/TrEMBL
	ENSSSCT00015060698.1	UniProtKB/TrEMBL
	ENSSSCT00015060756.1	UniProtKB/TrEMBL
	ENSSSCT00015060816.1	UniProtKB/TrEMBL
	ENSSSCT00015060881.1	UniProtKB/TrEMBL
	ENSSSCT00025024128.1	UniProtKB/TrEMBL
	ENSSSCT00025024154.1	UniProtKB/TrEMBL
	ENSSSCT00030008335.1	UniProtKB/TrEMBL
	ENSSSCT00030008343.1	UniProtKB/TrEMBL
	ENSSSCT00035063149.1	UniProtKB/TrEMBL
	ENSSSCT00035063154.1	UniProtKB/TrEMBL
	ENSSSCT00035063163.1	UniProtKB/TrEMBL
	ENSSSCT00035063174.1	UniProtKB/TrEMBL
	ENSSSCT00040053616.1	UniProtKB/TrEMBL
	ENSSSCT00040053903.1	UniProtKB/TrEMBL
	ENSSSCT00040054025.1	UniProtKB/TrEMBL
	ENSSSCT00040054139.1	UniProtKB/TrEMBL
	ENSSSCT00040054293.1	UniProtKB/TrEMBL
	ENSSSCT00045067319.1	UniProtKB/TrEMBL
	ENSSSCT00045067333.1	UniProtKB/TrEMBL
	ENSSSCT00045067352.1	UniProtKB/TrEMBL
	ENSSSCT00050002360.1	UniProtKB/TrEMBL
	ENSSSCT00050002401.1	UniProtKB/TrEMBL
	ENSSSCT00050002414.1	UniProtKB/TrEMBL
	ENSSSCT00050002424.1	UniProtKB/TrEMBL
	ENSSSCT00050002442.1	UniProtKB/TrEMBL
	ENSSSCT00055006567.1	UniProtKB/TrEMBL
	ENSSSCT00060004309.1	UniProtKB/TrEMBL
	ENSSSCT00060004321.1	UniProtKB/TrEMBL
	ENSSSCT00060004329.1	UniProtKB/TrEMBL
	ENSSSCT00060004337.1	UniProtKB/TrEMBL
	ENSSSCT00060004339.1	UniProtKB/TrEMBL
	ENSSSCT00060004341.1	UniProtKB/TrEMBL
	ENSSSCT00065058626.1	UniProtKB/TrEMBL
	ENSSSCT00065058632.1	UniProtKB/TrEMBL
	ENSSSCT00065058653.1	UniProtKB/TrEMBL
	ENSSSCT00070032772.1	UniProtKB/TrEMBL
	ENSSSCT00070032790.1	UniProtKB/TrEMBL
	ENSSSCT00070032811.1	UniProtKB/TrEMBL
	ENSSSCT00070032816.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.1560.10	UniProtKB/TrEMBL
	3.40.50.300	UniProtKB/TrEMBL
InterPro	AAA+_ATPase	UniProtKB/TrEMBL
	ABC1_TM_dom	UniProtKB/TrEMBL
	ABC1_TM_sf	UniProtKB/TrEMBL
	ABC_transporter-like	UniProtKB/TrEMBL
	ABC_transporter_CS	UniProtKB/TrEMBL
	ABCB9	UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/TrEMBL
	Type_I_exporter	UniProtKB/TrEMBL
KEGG Report	ssc:100155346	UniProtKB/TrEMBL
NCBI Gene	ABCB9	ENTREZGENE
PANTHER	ATP BINDING CASSETTE SUBFAMILY B MEMBER 9	UniProtKB/TrEMBL
	ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL	UniProtKB/TrEMBL
Pfam	ABC_membrane	UniProtKB/TrEMBL
	ABC_tran	UniProtKB/TrEMBL
PIRSF	ABC_prm/ATPase_B	UniProtKB/TrEMBL
PROSITE	ABC_TM1F	UniProtKB/TrEMBL
	ABC_TRANSPORTER_1	UniProtKB/TrEMBL
	ABC_TRANSPORTER_2	UniProtKB/TrEMBL
SMART	AAA	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52540	UniProtKB/TrEMBL
	SSF90123	UniProtKB/TrEMBL
UniProt	A0A4X1UBU7	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1UBX0_PIG	UniProtKB/TrEMBL
	A0A4X1UBX5_PIG	UniProtKB/TrEMBL
	A0A4X1UH76_PIG	UniProtKB/TrEMBL
	A0A5G2QCL7_PIG	UniProtKB/TrEMBL
	A0A5G2RN62_PIG	UniProtKB/TrEMBL
	A0A8D0NV67_PIG	UniProtKB/TrEMBL
	A0A8D1A3Y8_PIG	UniProtKB/TrEMBL
	A0A8D1PEQ5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1SM74_PIG	UniProtKB/TrEMBL
	A0A8D1UFY8_PIG	UniProtKB/TrEMBL
	F1RFJ4	ENTREZGENE, UniProtKB/TrEMBL
	I3LED8_PIG	UniProtKB/TrEMBL
VGNC ID	VGNC:97857	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar