TMEM126A (transmembrane protein 126A)

Gene: TMEM126A (transmembrane protein 126A) Sus scrofa

Analyze

Symbol:

TMEM126A

Name:

transmembrane protein 126A

RGD ID:

14282026

Description:

INVOLVED IN mitochondrial protein quality control (ortholog); protein insertion into mitochondrial inner membrane from matrix (ortholog); toll-like receptor 4 signaling pathway (ortholog); ASSOCIATED WITH exudative vitreoretinopathy 1 (ortholog); genetic disease (ortholog); Hereditary Optic Atrophies (ortholog); FOUND IN mitochondrial inner membrane (ortholog); INTERACTS WITH deoxynivalenol

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	19,576,295 - 19,585,277 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	19,576,241 - 19,585,869 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	21,846,389 - 21,855,417 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

exudative vitreoretinopathy 1 (ISO)

genetic disease (ISO)

Hereditary Optic Atrophies (ISO)

intellectual disability (ISO)

optic atrophy 7 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

deoxynivalenol (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

mitochondrial protein quality control (ISO)

mitochondrial respiratory chain complex I assembly (IBA,IEA)

optic nerve development (IEA)

protein insertion into mitochondrial inner membrane from matrix (ISO)

toll-like receptor 4 signaling pathway (IEA,ISO)

Cellular Component

membrane (IEA)

mitochondrial inner membrane (ISO)

mitochondrion (IBA,IEA)

plasma membrane (IEA)

References

Additional References at PubMed

PMID:15679890	PMID:30032202

Genomics

Comparative Map Data

TMEM126A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	19,576,295 - 19,585,277 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	19,576,241 - 19,585,869 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	21,846,389 - 21,855,417 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TMEM126A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	85,647,967 - 85,656,542 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	85,647,967 - 85,656,547 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	85,359,011 - 85,367,586 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	85,036,693 - 85,045,235 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	11	82,668,277 - 82,676,912 (+)	NCBI		Celera
Cytogenetic Map	11	q14.1	NCBI
HuRef	11	81,656,256 - 81,664,891 (+)	NCBI		HuRef
CHM1_1	11	85,243,754 - 85,252,388 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	85,584,644 - 85,593,220 (+)	NCBI		T2T-CHM13v2.0

Tmem126a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	90,099,908 - 90,106,411 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	90,099,908 - 90,106,437 (-)	Ensembl		GRCm39 Ensembl
GRCm38	7	90,450,700 - 90,457,203 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	90,450,700 - 90,457,229 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	97,599,222 - 97,605,718 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	90,325,904 - 90,332,400 (-)	NCBI		MGSCv36	mm8
Celera	7	87,778,196 - 87,784,676 (-)	NCBI		Celera
Cytogenetic Map	7	E1	NCBI
cM Map	7	50.59	NCBI

Tmem126a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	153,837,015 - 153,843,192 (-)	NCBI		GRCr8
mRatBN7.2	1	144,424,481 - 144,430,730 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	144,422,703 - 144,430,628 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	152,347,274 - 152,353,446 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	159,528,451 - 159,534,610 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	152,402,370 - 152,408,529 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	156,283,105 - 156,291,057 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	156,283,128 - 156,291,052 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	162,529,113 - 162,537,179 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	147,129,330 - 147,137,259 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	147,207,735 - 147,215,665 (-)	NCBI
Celera	1	142,643,098 - 142,651,027 (-)	NCBI		Celera
Cytogenetic Map	1	q32	NCBI

Tmem126a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955414	7,216,286 - 7,224,475 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955414	7,214,408 - 7,224,499 (-)	NCBI	ChiLan1.0	ChiLan1.0

TMEM126A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	86,567,317 - 86,579,574 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	87,620,767 - 87,630,548 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	80,703,855 - 80,712,459 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	84,312,434 - 84,321,037 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	84,312,434 - 84,321,037 (+)	Ensembl	panpan1.1		panPan2

TMEM126A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	21	13,787,074 - 13,795,779 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	21	13,787,123 - 13,795,739 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	21	13,653,725 - 13,662,471 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	21	13,967,872 - 13,976,597 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	21	13,967,464 - 13,976,562 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	21	13,756,370 - 13,765,102 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	21	13,828,697 - 13,837,423 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	21	13,881,469 - 13,890,217 (-)	NCBI		UU_Cfam_GSD_1.0

Tmem126a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	71,938,905 - 71,945,739 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936498	13,538,565 - 13,545,338 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TMEM126A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	76,888,688 - 76,897,883 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	76,888,734 - 76,897,841 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666043	48,824,623 - 48,833,726 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tmem126a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624845	4,264,497 - 4,272,973 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in TMEM126A
263 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium				1	2	1		1
Low	10	4	3	4		22	2	2	3
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001243592	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005667190	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005667191	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005667192	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005667193	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013979208	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000070	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK392312	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY609667	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU928672	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01018973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000059221 ⟹ ENSSSCP00000040462

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	9	19,576,295 - 19,585,277 (+)	Ensembl

RefSeq Acc Id:

NM_001243592 ⟹ NP_001230521

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	9	19,576,299 - 19,585,285 (+)	NCBI

Sequence:

show sequence

CGCCCGGGCGCGTTGCGCAAAGATTGGAGTGAACCTTCGCGTGGCTGAGGAAGACCAGAAGAGG
CCCCGACTGCTGGAAGGAGAAAGTAAGATATACATCATCAAAAAATAGTATTTTAATTTAAGGC
TCAAGATGGAAAATCATGAACCAGATGATACTATCAAGGAAAACTTAATTGATACCATAACCAG
AAAAACCAACCAACTTCCAGAAGCAGAAAGGAATCTGCTTGAAAGTGGATCAACATACATTGGA
ATTAATGCTGCTCTCTGTGGCCTAATAGCAAATAGTCATTTTCGACGCATCTTACATGTGACAC
AGGCTCGTATAGCTGCTGGCTTACCAATGGCAGTGATCCCATTTTTGACAGCACACGTTTCTTA
CCAAGGTTTTATAAGCTTACCTTTGAGTACAGGTGATTTGCATTGTGAAACCTGTACCATAATA
CGAGGTGGATTGGTTGGTCTTGTTTTTGGTGGTCTGTATCCTGTTTTCTTGGCTCTACCTGTGA
ATGGTGGCCTTGCAGCCAGGTATAACTCAGCACTGCTACCTGAGAAAGGAAACATCTTAAATTA
CTGGATGAGGATTTCTAAGCCTGTCTTTAGAAAGATGTTATTTCCCATTTTGCTCCAGACTGGG
TTTGGAGCATACCTTGGGTCTAGACAATATAAAGTACTTATAAAGGCTCTTCAGTTACCTGAAC
CTGGCCTGGAAATGCACTGATTCTAAAACAAGTCTGTACACAAGAATAAAATTGTAAAAAATAC

hide sequence

RefSeq Acc Id:

XM_005667190 ⟹ XP_005667247

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	9	19,576,241 - 19,585,869 (+)	NCBI

Sequence:

show sequence

AGCCGCGCGGCCCCCCAGTGCCCGCCCCGGACCGCGTCACGTGTCAGAAAGATGGCTGCGCCCG
GGCGCGTTGCGCAAAGATTGGAGTGAACCTTCGCGTGGCTGAGGAAGACCAGAAGAGGCCCCGA
CTGCTGGAAGGAGAAAATATACATCATCAAAAAATAGTATTTTAATTTAAGGCTCAAGATGGAA
AATCATGAACCAGATGATACAATCAAGGAAAACTTAATTGATACCATAACCAGAAAAACCAACC
AACTTCCAGAAGCAGAAAGGAATCTGCTTGAAAGTGGATCAACATACATTGGAATTAATGCTGC
TCTCTGTGGCCTAATAGCAAATAGTCATTTTCGACGCATCTTACATGTGACACAGGCTCGTATA
GCTGCTGGCTTACCAATGGCAGTGATCCCATTTTTGACAGCACATGTTTCTTACCAAGGTTTTA
TAAGCTTACCTTTGAGTACAGGTGATTTGCATTGTGAAACCTGTACCATAATACGAGGTGGATT
GGTTGGTCTTGTTTTTGGTGGTCTGTATCCTGTTTTCTTGGCTCTACCTGTGAATGGTGGCCTT
GCAGCCAGGTATAACTCAGCACTGCTACCTGAGAAAGGAAACATCTTAAATTACTGGATGAGGA
TTTCTAAGCCTGTCTTTAGAAAGATGTTATTTCCCATTTTGCTCCAGACTGGGTTTGGAGCATA
CCTTGGGTCTAGACAATATAAAGTACTTATAAAGGCTCTTCAGTTACCTGAACCTGGCCTGGAA
ATGCACTGATTCTAAAACAAGTCTGTACACAAGAATAAAATTGTAAAAAATAACCTCTGTCTAA
GTATGAGTAAACACAGACTTAAAACTTATCACATGCGGTACAATTCTGGGATCAAAAGGCTGGT
CCATACTACCACTTAAACAAGAGCATAACTTCTCTAGTTTTCCCAGTATTGTCTCCCACACTGC
TTGCTCTACTCTTTTACATTAGGCAGAGTTTGGTCATCACAGAGGAAAAAAATAACCATATAAA
AATTTTCACTGAACACCTCATAAAGAATCCAAACAGGAATGAAAATGGAGGTGTGGGAGGAGTA
TCAGTACACTAATGTTCTACTTCATTTTCTCAATTCACTGTTTCCCATAGGTAGTTCATTCACA
GGATCTTAGAACATGTTTAAAAACATTCCTCAGAGAGGGATCAATTCTAGCATTCTTGACGTGA
TTATTCAGGCTCAGCTTGAGCTGTCCTAATGATACACCTATTTCAAAAGTCATCTTTTTATATC
CTTGGACAACTGTAAGATTGAAGCCAAATCTGTCTTTGAAAGCTTTTCTCCAGTGTGGTATATT
AATTCTTTGCAATCACATAGACTTGAACCTTTTTTTTTTTTTTTTTTTCAGCTGTATGAC

hide sequence

RefSeq Acc Id:

XM_005667191 ⟹ XP_005667248

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	9	19,576,255 - 19,585,869 (+)	NCBI

Sequence:

show sequence

CCAGTGCCCGCCCCGGACCGCGTCACGTGTCAGAAAGATGGCTGCGCCCGGGCGCGTTGCGCAA
AGATTGGAGTGAACCTTCGCGTGGCTGAGGAAGACCAGAAGAGGCCCCGACTGCTGGAAGGAGA
AAGTAAGGCTCAAGATGGAAAATCATGAACCAGATGATACAATCAAGGAAAACTTAATTGATAC
CATAACCAGAAAAACCAACCAACTTCCAGAAGCAGAAAGGAATCTGCTTGAAAGTGGATCAACA
TACATTGGAATTAATGCTGCTCTCTGTGGCCTAATAGCAAATAGTCATTTTCGACGCATCTTAC
ATGTGACACAGGCTCGTATAGCTGCTGGCTTACCAATGGCAGTGATCCCATTTTTGACAGCACA
TGTTTCTTACCAAGGTTTTATAAGCTTACCTTTGAGTACAGGTGATTTGCATTGTGAAACCTGT
ACCATAATACGAGGTGGATTGGTTGGTCTTGTTTTTGGTGGTCTGTATCCTGTTTTCTTGGCTC
TACCTGTGAATGGTGGCCTTGCAGCCAGGTATAACTCAGCACTGCTACCTGAGAAAGGAAACAT
CTTAAATTACTGGATGAGGATTTCTAAGCCTGTCTTTAGAAAGATGTTATTTCCCATTTTGCTC
CAGACTGGGTTTGGAGCATACCTTGGGTCTAGACAATATAAAGTACTTATAAAGGCTCTTCAGT
TACCTGAACCTGGCCTGGAAATGCACTGATTCTAAAACAAGTCTGTACACAAGAATAAAATTGT
AAAAAATAACCTCTGTCTAAGTATGAGTAAACACAGACTTAAAACTTATCACATGCGGTACAAT
TCTGGGATCAAAAGGCTGGTCCATACTACCACTTAAACAAGAGCATAACTTCTCTAGTTTTCCC
AGTATTGTCTCCCACACTGCTTGCTCTACTCTTTTACATTAGGCAGAGTTTGGTCATCACAGAG
GAAAAAAATAACCATATAAAAATTTTCACTGAACACCTCATAAAGAATCCAAACAGGAATGAAA
ATGGAGGTGTGGGAGGAGTATCAGTACACTAATGTTCTACTTCATTTTCTCAATTCACTGTTTC
CCATAGGTAGTTCATTCACAGGATCTTAGAACATGTTTAAAAACATTCCTCAGAGAGGGATCAA
TTCTAGCATTCTTGACGTGATTATTCAGGCTCAGCTTGAGCTGTCCTAATGATACACCTATTTC
AAAAGTCATCTTTTTATATCCTTGGACAACTGTAAGATTGAAGCCAAATCTGTCTTTGAAAGCT
TTTCTCCAGTGTGGTATATTAATTCTTTGCAATCACATAGACTTGAACCTTTTTTTTTTTTTTT
TTTTCAGCTGTATGAC

hide sequence

RefSeq Acc Id:

XM_005667192 ⟹ XP_005667249

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	9	19,576,275 - 19,585,869 (+)	NCBI

Sequence:

show sequence

CGTCACGTGTCAGAAAGATGGCTGCGCCCGGGCGCGTTGCGCAAAGATTGGAGTGAACCTTCGC
GTGGCTGAGGAAGACCAGAAGAGGCCCCGACTGCTGGAAGGAGAAAGTAAGGGCAAAGAGCCTA
TCATGTAACCAAGGCCCTCAAGAAATTTGCATCCAAGAAACACAGAGATATACATCATCAAAAA
ATAGTATTTTAATTTAAGGCTCAAGATGGAAAATCATGAACCAGATGATACAATCAAGGAAAAC
TTAATTGATACCATAACCAGAAAAACCAACCAACTTCCAGAAGCAGAAAGGAATCTGCTTGAAA
GTGGATCAACATACATTGGAATTAATGCTGCTCTCTGTGGCCTAATAGCAAATAGTCATTTTCG
ACGCATCTTACATGTGACACAGGCTCGTATAGCTGCTGGCTTACCAATGGCAGTGATCCCATTT
TTGACAGCACATGTTTCTTACCAAGGTTTTATAAGCTTACCTTTGAGTACAGGTGATTTGCATT
GTGAAACCTGTACCATAATACGAGGTGGATTGGTTGGTCTTGTTTTTGGTGGTCTGTATCCTGT
TTTCTTGGCTCTACCTGTGAATGGTGGCCTTGCAGCCAGGTATAACTCAGCACTGCTACCTGAG
AAAGGAAACATCTTAAATTACTGGATGAGGATTTCTAAGCCTGTCTTTAGAAAGATGTTATTTC
CCATTTTGCTCCAGACTGGGTTTGGAGCATACCTTGGGTCTAGACAATATAAAGTACTTATAAA
GGCTCTTCAGTTACCTGAACCTGGCCTGGAAATGCACTGATTCTAAAACAAGTCTGTACACAAG
AATAAAATTGTAAAAAATAACCTCTGTCTAAGTATGAGTAAACACAGACTTAAAACTTATCACA
TGCGGTACAATTCTGGGATCAAAAGGCTGGTCCATACTACCACTTAAACAAGAGCATAACTTCT
CTAGTTTTCCCAGTATTGTCTCCCACACTGCTTGCTCTACTCTTTTACATTAGGCAGAGTTTGG
TCATCACAGAGGAAAAAAATAACCATATAAAAATTTTCACTGAACACCTCATAAAGAATCCAAA
CAGGAATGAAAATGGAGGTGTGGGAGGAGTATCAGTACACTAATGTTCTACTTCATTTTCTCAA
TTCACTGTTTCCCATAGGTAGTTCATTCACAGGATCTTAGAACATGTTTAAAAACATTCCTCAG
AGAGGGATCAATTCTAGCATTCTTGACGTGATTATTCAGGCTCAGCTTGAGCTGTCCTAATGAT
ACACCTATTTCAAAAGTCATCTTTTTATATCCTTGGACAACTGTAAGATTGAAGCCAAATCTGT
CTTTGAAAGCTTTTCTCCAGTGTGGTATATTAATTCTTTGCAATCACATAGACTTGAACCTTTT
TTTTTTTTTTTTTTTCAGCTGTATGAC

hide sequence

RefSeq Acc Id:

XM_005667193 ⟹ XP_005667250

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	9	19,576,267 - 19,585,869 (+)	NCBI

Sequence:

show sequence

CCGGACCGCGTCACGTGTCAGAAAGATGGCTGCGCCCGGGCGCGTTGCGCAAAGATTGGAGTGA
ACCTTCGCGTGGCTGAGGAAGACCAGAAGAGGCCCCGACTGCTGGAAGGAGAAAGCTCAAGATG
GAAAATCATGAACCAGATGATACAATCAAGGAAAACTTAATTGATACCATAACCAGAAAAACCA
ACCAACTTCCAGAAGCAGAAAGGAATCTGCTTGAAAGTGGATCAACATACATTGGAATTAATGC
TGCTCTCTGTGGCCTAATAGCAAATAGTCATTTTCGACGCATCTTACATGTGACACAGGCTCGT
ATAGCTGCTGGCTTACCAATGGCAGTGATCCCATTTTTGACAGCACATGTTTCTTACCAAGGTT
TTATAAGCTTACCTTTGAGTACAGGTGATTTGCATTGTGAAACCTGTACCATAATACGAGGTGG
ATTGGTTGGTCTTGTTTTTGGTGGTCTGTATCCTGTTTTCTTGGCTCTACCTGTGAATGGTGGC
CTTGCAGCCAGGTATAACTCAGCACTGCTACCTGAGAAAGGAAACATCTTAAATTACTGGATGA
GGATTTCTAAGCCTGTCTTTAGAAAGATGTTATTTCCCATTTTGCTCCAGACTGGGTTTGGAGC
ATACCTTGGGTCTAGACAATATAAAGTACTTATAAAGGCTCTTCAGTTACCTGAACCTGGCCTG
GAAATGCACTGATTCTAAAACAAGTCTGTACACAAGAATAAAATTGTAAAAAATAACCTCTGTC
TAAGTATGAGTAAACACAGACTTAAAACTTATCACATGCGGTACAATTCTGGGATCAAAAGGCT
GGTCCATACTACCACTTAAACAAGAGCATAACTTCTCTAGTTTTCCCAGTATTGTCTCCCACAC
TGCTTGCTCTACTCTTTTACATTAGGCAGAGTTTGGTCATCACAGAGGAAAAAAATAACCATAT
AAAAATTTTCACTGAACACCTCATAAAGAATCCAAACAGGAATGAAAATGGAGGTGTGGGAGGA
GTATCAGTACACTAATGTTCTACTTCATTTTCTCAATTCACTGTTTCCCATAGGTAGTTCATTC
ACAGGATCTTAGAACATGTTTAAAAACATTCCTCAGAGAGGGATCAATTCTAGCATTCTTGACG
TGATTATTCAGGCTCAGCTTGAGCTGTCCTAATGATACACCTATTTCAAAAGTCATCTTTTTAT
ATCCTTGGACAACTGTAAGATTGAAGCCAAATCTGTCTTTGAAAGCTTTTCTCCAGTGTGGTAT
ATTAATTCTTTGCAATCACATAGACTTGAACCTTTTTTTTTTTTTTTTTTTCAGCTGTATGAC

hide sequence

RefSeq Acc Id:

XM_013979208 ⟹ XP_013834662

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	9	19,576,274 - 19,585,869 (+)	NCBI

Sequence:

show sequence

GCGTCACGTGTCAGAAAGATGGCTGCGCCCGGGCGCGTTGCGCAAAGATTGGAGTGAACCTTCG
CGTGGCTGAGGAAGACCAGAAGAGGCCCCGACTGCTGGAAGGAGAAAGTAAGGGCAAAGAGCCT
ATCATGTAACCAAGGCCCTCAAGAAATTTGCATCCAAGAAACACAGAGGCTCAAGATGGAAAAT
CATGAACCAGATGATACAATCAAGGAAAACTTAATTGATACCATAACCAGAAAAACCAACCAAC
TTCCAGAAGCAGAAAGGAATCTGCTTGAAAGTGGATCAACATACATTGGAATTAATGCTGCTCT
CTGTGGCCTAATAGCAAATAGTCATTTTCGACGCATCTTACATGTGACACAGGCTCGTATAGCT
GCTGGCTTACCAATGGCAGTGATCCCATTTTTGACAGCACATGTTTCTTACCAAGGTTTTATAA
GCTTACCTTTGAGTACAGGTGATTTGCATTGTGAAACCTGTACCATAATACGAGGTGGATTGGT
TGGTCTTGTTTTTGGTGGTCTGTATCCTGTTTTCTTGGCTCTACCTGTGAATGGTGGCCTTGCA
GCCAGGTATAACTCAGCACTGCTACCTGAGAAAGGAAACATCTTAAATTACTGGATGAGGATTT
CTAAGCCTGTCTTTAGAAAGATGTTATTTCCCATTTTGCTCCAGACTGGGTTTGGAGCATACCT
TGGGTCTAGACAATATAAAGTACTTATAAAGGCTCTTCAGTTACCTGAACCTGGCCTGGAAATG
CACTGATTCTAAAACAAGTCTGTACACAAGAATAAAATTGTAAAAAATAACCTCTGTCTAAGTA
TGAGTAAACACAGACTTAAAACTTATCACATGCGGTACAATTCTGGGATCAAAAGGCTGGTCCA
TACTACCACTTAAACAAGAGCATAACTTCTCTAGTTTTCCCAGTATTGTCTCCCACACTGCTTG
CTCTACTCTTTTACATTAGGCAGAGTTTGGTCATCACAGAGGAAAAAAATAACCATATAAAAAT
TTTCACTGAACACCTCATAAAGAATCCAAACAGGAATGAAAATGGAGGTGTGGGAGGAGTATCA
GTACACTAATGTTCTACTTCATTTTCTCAATTCACTGTTTCCCATAGGTAGTTCATTCACAGGA
TCTTAGAACATGTTTAAAAACATTCCTCAGAGAGGGATCAATTCTAGCATTCTTGACGTGATTA
TTCAGGCTCAGCTTGAGCTGTCCTAATGATACACCTATTTCAAAAGTCATCTTTTTATATCCTT
GGACAACTGTAAGATTGAAGCCAAATCTGTCTTTGAAAGCTTTTCTCCAGTGTGGTATATTAAT
TCTTTGCAATCACATAGACTTGAACCTTTTTTTTTTTTTTTTTTTCAGCTGTATGAC

hide sequence

Protein Sequences


Protein RefSeqs	NP_001230521	(Get FASTA)	NCBI Sequence Viewer
	XP_005667247	(Get FASTA)	NCBI Sequence Viewer
	XP_005667248	(Get FASTA)	NCBI Sequence Viewer
	XP_005667249	(Get FASTA)	NCBI Sequence Viewer
	XP_005667250	(Get FASTA)	NCBI Sequence Viewer
	XP_013834662	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000040462
	ENSSSCP00000040462.1
	ENSSSCP00005030637.1
	ENSSSCP00005030655.1
	ENSSSCP00015008730.1
	ENSSSCP00025031234.1
	ENSSSCP00030041695.1
	ENSSSCP00035015080.1
	ENSSSCP00040041018.1
	ENSSSCP00045014253.1
	ENSSSCP00050017579.1
	ENSSSCP00055017869.1
	ENSSSCP00060012554.1
	ENSSSCP00065027171.1
	ENSSSCP00070024230.1
	ENSSSCP00070024241.1

RefSeq Acc Id:	XP_005667247 ⟸ XM_005667190
- Peptide Label:	isoform X1
- UniProtKB:	I3LJK4 (UniProtKB/TrEMBL), A0A4X1U7Y9 (UniProtKB/TrEMBL), A0A8D1U0J3 (UniProtKB/TrEMBL), A0A8D1UPS6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MENHEPDDTIKENLIDTITRKTNQLPEAERNLLESGSTYIGINAALCGLIANSHFRRILHVTQA RIAAGLPMAVIPFLTAHVSYQGFISLPLSTGDLHCETCTIIRGGLVGLVFGGLYPVFLALPVNG GLAARYNSALLPEKGNILNYWMRISKPVFRKMLFPILLQTGFGAYLGSRQYKVLIKALQLPEPG LEMH hide sequence

RefSeq Acc Id:	XP_005667248 ⟸ XM_005667191
- Peptide Label:	isoform X1
- UniProtKB:	I3LJK4 (UniProtKB/TrEMBL), A0A4X1U7Y9 (UniProtKB/TrEMBL), A0A8D1U0J3 (UniProtKB/TrEMBL), A0A8D1UPS6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MENHEPDDTIKENLIDTITRKTNQLPEAERNLLESGSTYIGINAALCGLIANSHFRRILHVTQA RIAAGLPMAVIPFLTAHVSYQGFISLPLSTGDLHCETCTIIRGGLVGLVFGGLYPVFLALPVNG GLAARYNSALLPEKGNILNYWMRISKPVFRKMLFPILLQTGFGAYLGSRQYKVLIKALQLPEPG LEMH hide sequence

RefSeq Acc Id:	XP_005667250 ⟸ XM_005667193
- Peptide Label:	isoform X1
- UniProtKB:	I3LJK4 (UniProtKB/TrEMBL), A0A4X1U7Y9 (UniProtKB/TrEMBL), A0A8D1U0J3 (UniProtKB/TrEMBL), A0A8D1UPS6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MENHEPDDTIKENLIDTITRKTNQLPEAERNLLESGSTYIGINAALCGLIANSHFRRILHVTQA RIAAGLPMAVIPFLTAHVSYQGFISLPLSTGDLHCETCTIIRGGLVGLVFGGLYPVFLALPVNG GLAARYNSALLPEKGNILNYWMRISKPVFRKMLFPILLQTGFGAYLGSRQYKVLIKALQLPEPG LEMH hide sequence

RefSeq Acc Id:	XP_013834662 ⟸ XM_013979208
- Peptide Label:	isoform X1
- UniProtKB:	I3LJK4 (UniProtKB/TrEMBL), A0A4X1U7Y9 (UniProtKB/TrEMBL), A0A8D1U0J3 (UniProtKB/TrEMBL), A0A8D1UPS6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MENHEPDDTIKENLIDTITRKTNQLPEAERNLLESGSTYIGINAALCGLIANSHFRRILHVTQA RIAAGLPMAVIPFLTAHVSYQGFISLPLSTGDLHCETCTIIRGGLVGLVFGGLYPVFLALPVNG GLAARYNSALLPEKGNILNYWMRISKPVFRKMLFPILLQTGFGAYLGSRQYKVLIKALQLPEPG LEMH hide sequence

RefSeq Acc Id:	XP_005667249 ⟸ XM_005667192
- Peptide Label:	isoform X1
- UniProtKB:	I3LJK4 (UniProtKB/TrEMBL), A0A4X1U7Y9 (UniProtKB/TrEMBL), A0A8D1U0J3 (UniProtKB/TrEMBL), A0A8D1UPS6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MENHEPDDTIKENLIDTITRKTNQLPEAERNLLESGSTYIGINAALCGLIANSHFRRILHVTQA RIAAGLPMAVIPFLTAHVSYQGFISLPLSTGDLHCETCTIIRGGLVGLVFGGLYPVFLALPVNG GLAARYNSALLPEKGNILNYWMRISKPVFRKMLFPILLQTGFGAYLGSRQYKVLIKALQLPEPG LEMH hide sequence

RefSeq Acc Id:	NP_001230521 ⟸ NM_001243592
- UniProtKB:	I3LJK4 (UniProtKB/TrEMBL), A0A4X1U7Y9 (UniProtKB/TrEMBL), A0A8D1U0J3 (UniProtKB/TrEMBL), A0A8D1UPS6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MENHEPDDTIKENLIDTITRKTNQLPEAERNLLESGSTYIGINAALCGLIANSHFRRILHVTQA RIAAGLPMAVIPFLTAHVSYQGFISLPLSTGDLHCETCTIIRGGLVGLVFGGLYPVFLALPVNG GLAARYNSALLPEKGNILNYWMRISKPVFRKMLFPILLQTGFGAYLGSRQYKVLIKALQLPEPG LEMH hide sequence

RefSeq Acc Id:

ENSSSCP00000040462 ⟸ ENSSSCT00000059221

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000025187	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00005031122	UniProtKB/TrEMBL
	ENSSSCG00015016899	UniProtKB/TrEMBL
	ENSSSCG00025052699	UniProtKB/TrEMBL
	ENSSSCG00030064729	UniProtKB/TrEMBL
	ENSSSCG00035028625	UniProtKB/TrEMBL
	ENSSSCG00040067871	UniProtKB/TrEMBL
	ENSSSCG00045012181	UniProtKB/TrEMBL
	ENSSSCG00050031573	UniProtKB/TrEMBL
	ENSSSCG00055011520	UniProtKB/TrEMBL
	ENSSSCG00060021572	UniProtKB/TrEMBL
	ENSSSCG00065045855	UniProtKB/TrEMBL
	ENSSSCG00070014813	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000059221	ENTREZGENE
	ENSSSCT00000059221.2	UniProtKB/TrEMBL
	ENSSSCT00005049605.1	UniProtKB/TrEMBL
	ENSSSCT00005049638.1	UniProtKB/TrEMBL
	ENSSSCT00015022386.1	UniProtKB/TrEMBL
	ENSSSCT00025072138.1	UniProtKB/TrEMBL
	ENSSSCT00030090481.1	UniProtKB/TrEMBL
	ENSSSCT00035037850.1	UniProtKB/TrEMBL
	ENSSSCT00040092865.1	UniProtKB/TrEMBL
	ENSSSCT00045020712.1	UniProtKB/TrEMBL
	ENSSSCT00050042448.1	UniProtKB/TrEMBL
	ENSSSCT00055022590.1	UniProtKB/TrEMBL
	ENSSSCT00060029261.1	UniProtKB/TrEMBL
	ENSSSCT00065062729.1	UniProtKB/TrEMBL
	ENSSSCT00070029064.1	UniProtKB/TrEMBL
	ENSSSCT00070029074.1	UniProtKB/TrEMBL
InterPro	TMEM126	UniProtKB/TrEMBL
KEGG Report	ssc:100627094	UniProtKB/TrEMBL
NCBI Gene	TMEM126A	ENTREZGENE
PANTHER	PTHR16296	UniProtKB/TrEMBL
	TRANSMEMBRANE PROTEIN 126A	UniProtKB/TrEMBL
Pfam	TMEM126	UniProtKB/TrEMBL
UniProt	A0A4X1U7Y9	ENTREZGENE
	A0A8D1U0J3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1UPS6	ENTREZGENE, UniProtKB/TrEMBL
	I3LJK4	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	A0A4X1U7Y9	UniProtKB/TrEMBL
VGNC ID	VGNC:104077	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

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