HAUS7 (HAUS augmin like complex subunit 7) - Rat Genome Database

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Gene: HAUS7 (HAUS augmin like complex subunit 7) Sus scrofa
Analyze
Symbol: HAUS7
Name: HAUS augmin like complex subunit 7
RGD ID: 14281100
Description: ENCODES a protein that exhibits 3'-5' exonuclease activity (inferred); 3'-5'-DNA exonuclease activity (inferred); microtubule minus-end binding (inferred); INVOLVED IN centrosome cycle (inferred); spindle assembly (inferred); ASSOCIATED WITH adrenoleukodystrophy (ortholog); autistic disorder (ortholog); Barth syndrome (ortholog); FOUND IN HAUS complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: HAUS augmin-like complex subunit 7
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX124,234,736 - 124,258,098 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X124,234,735 - 124,258,133 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X141,801,317 - 141,821,536 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
centrosome cycle  (IBA,IEA)
spindle assembly  (IBA,IEA)

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
HAUS7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX124,234,736 - 124,258,098 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X124,234,735 - 124,258,133 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X141,801,317 - 141,821,536 (-)NCBISscrofa10.2Sscrofa10.2susScr3
HAUS7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X153,447,668 - 153,495,465 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX153,447,668 - 153,495,516 (-)EnsemblGRCh38hg38GRCh38
GRCh37X152,713,126 - 152,760,923 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X152,366,318 - 152,389,283 (-)NCBINCBI36Build 36hg18NCBI36
CeleraX152,946,833 - 152,970,312 (-)NCBICelera
Cytogenetic MapXq28NCBI
HuRefX141,372,261 - 141,419,460 (-)NCBIHuRef
CHM1_1X152,587,548 - 152,635,492 (-)NCBICHM1_1
T2T-CHM13v2.0X151,721,251 - 151,769,038 (-)NCBIT2T-CHM13v2.0
Haus7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X72,480,921 - 72,502,635 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX72,480,921 - 72,502,650 (-)EnsemblGRCm39 Ensembl
GRCm38X73,437,315 - 73,459,029 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX73,437,315 - 73,459,044 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X70,682,654 - 70,704,368 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X69,690,035 - 69,711,749 (-)NCBIMGSCv36mm8
CeleraX64,691,155 - 64,712,939 (-)NCBICelera
Cytogenetic MapXA7.3NCBI
cM MapX37.32NCBI
Haus7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X156,306,320 - 156,331,940 (-)NCBIGRCr8
mRatBN7.2X151,154,979 - 151,174,441 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX151,154,979 - 151,180,577 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX153,296,141 - 153,315,224 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X156,859,352 - 156,878,435 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X154,531,185 - 154,550,268 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X157,347,222 - 157,372,796 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX157,353,577 - 157,372,809 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01153,095,311 - 153,120,880 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X159,337,591 - 159,356,655 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1136,715,537 - 136,734,620 (+)NCBICelera
Cytogenetic MapXq37NCBI
Haus7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955580210,820 - 230,734 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955580210,799 - 230,450 (-)NCBIChiLan1.0ChiLan1.0
HAUS7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X153,484,903 - 153,524,280 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X153,488,507 - 153,514,688 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X142,998,240 - 143,032,602 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X152,884,656 - 152,907,620 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX152,881,714 - 152,907,620 (-)Ensemblpanpan1.1panPan2
HAUS7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X121,264,824 - 121,296,712 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX121,266,584 - 121,297,076 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX106,597,285 - 106,627,487 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X123,524,855 - 123,550,859 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1X120,178,899 - 120,209,102 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X122,694,013 - 122,724,221 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X122,456,069 - 122,486,247 (-)NCBIUU_Cfam_GSD_1.0
Haus7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X118,584,145 - 118,612,356 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936809321,497 - 350,110 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936809321,906 - 350,105 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HAUS7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X127,882,121 - 127,930,089 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX127,878,900 - 127,902,344 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606565,743,859 - 65,788,401 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Haus7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624946190,127 - 210,497 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624946190,065 - 210,003 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in HAUS7
297 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium
Low 7 2 3 5 1 18 2 3 3
Below cutoff 3 2 1 4

Sequence


RefSeq Acc Id: ENSSSCT00000013957   ⟹   ENSSSCP00000013574
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX124,234,736 - 124,258,098 (-)Ensembl
RefSeq Acc Id: XM_005673991   ⟹   XP_005674048
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X124,234,735 - 124,258,132 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005673993   ⟹   XP_005674050
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X124,234,735 - 124,258,133 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021079954   ⟹   XP_020935613
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X124,234,735 - 124,258,132 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021079955   ⟹   XP_020935614
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X124,234,735 - 124,258,133 (-)NCBI
Sequence:
RefSeq Acc Id: XP_020935614   ⟸   XM_021079955
- Peptide Label: isoform X2
- UniProtKB: A0A4X1SZX4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005674050   ⟸   XM_005673993
- Peptide Label: isoform X2
- UniProtKB: A0A4X1SZX4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020935613   ⟸   XM_021079954
- Peptide Label: isoform X1
- UniProtKB: F1S2B5 (UniProtKB/TrEMBL),   A0A4X1SZX4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005674048   ⟸   XM_005673991
- Peptide Label: isoform X1
- UniProtKB: F1S2B5 (UniProtKB/TrEMBL),   A0A4X1SZX4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000013574   ⟸   ENSSSCT00000013957
Protein Domains
Exonuclease


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000012767 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015069550 UniProtKB/TrEMBL
  ENSSSCG00025074144 UniProtKB/TrEMBL
  ENSSSCG00025074374 UniProtKB/TrEMBL
  ENSSSCG00030025745 UniProtKB/TrEMBL
  ENSSSCG00030025801 UniProtKB/TrEMBL
  ENSSSCG00035039083 UniProtKB/TrEMBL
  ENSSSCG00040072253 UniProtKB/TrEMBL
  ENSSSCG00040072387 UniProtKB/TrEMBL
  ENSSSCG00045031411 UniProtKB/TrEMBL
  ENSSSCG00050065062 UniProtKB/TrEMBL
  ENSSSCG00050065181 UniProtKB/TrEMBL
  ENSSSCG00055008640 UniProtKB/TrEMBL
  ENSSSCG00055008773 UniProtKB/TrEMBL
  ENSSSCG00060005696 UniProtKB/TrEMBL
  ENSSSCG00060005889 UniProtKB/TrEMBL
  ENSSSCG00065015563 UniProtKB/TrEMBL
  ENSSSCG00065015707 UniProtKB/TrEMBL
  ENSSSCG00070005138 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000013957 ENTREZGENE
  ENSSSCT00000013957.5 UniProtKB/TrEMBL
  ENSSSCT00015093311.1 UniProtKB/TrEMBL
  ENSSSCT00015093404.1 UniProtKB/TrEMBL
  ENSSSCT00025102122.1 UniProtKB/TrEMBL
  ENSSSCT00025102234.1 UniProtKB/TrEMBL
  ENSSSCT00025102318.1 UniProtKB/TrEMBL
  ENSSSCT00025102449.1 UniProtKB/TrEMBL
  ENSSSCT00025102481.1 UniProtKB/TrEMBL
  ENSSSCT00030035955.1 UniProtKB/TrEMBL
  ENSSSCT00030035969.1 UniProtKB/TrEMBL
  ENSSSCT00030035983.1 UniProtKB/TrEMBL
  ENSSSCT00030036021.1 UniProtKB/TrEMBL
  ENSSSCT00035051895.1 UniProtKB/TrEMBL
  ENSSSCT00035051905.1 UniProtKB/TrEMBL
  ENSSSCT00035051923.1 UniProtKB/TrEMBL
  ENSSSCT00040099433.1 UniProtKB/TrEMBL
  ENSSSCT00040099484.1 UniProtKB/TrEMBL
  ENSSSCT00040099560.1 UniProtKB/TrEMBL
  ENSSSCT00040099632.1 UniProtKB/TrEMBL
  ENSSSCT00045053540.1 UniProtKB/TrEMBL
  ENSSSCT00045053655.1 UniProtKB/TrEMBL
  ENSSSCT00045053764.1 UniProtKB/TrEMBL
  ENSSSCT00050088614.1 UniProtKB/TrEMBL
  ENSSSCT00050088774.1 UniProtKB/TrEMBL
  ENSSSCT00055016897.1 UniProtKB/TrEMBL
  ENSSSCT00055016949.1 UniProtKB/TrEMBL
  ENSSSCT00055017029.1 UniProtKB/TrEMBL
  ENSSSCT00055017107.1 UniProtKB/TrEMBL
  ENSSSCT00055017131.1 UniProtKB/TrEMBL
  ENSSSCT00060007212.1 UniProtKB/TrEMBL
  ENSSSCT00060007216.1 UniProtKB/TrEMBL
  ENSSSCT00060007221.1 UniProtKB/TrEMBL
  ENSSSCT00060007449.1 UniProtKB/TrEMBL
  ENSSSCT00065020661.1 UniProtKB/TrEMBL
  ENSSSCT00065020804.1 UniProtKB/TrEMBL
  ENSSSCT00070009758.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.420.10 UniProtKB/TrEMBL
InterPro Exonuclease_RNaseT/DNA_pol3 UniProtKB/TrEMBL
  Haus7-like UniProtKB/TrEMBL
  RNaseH-like_sf UniProtKB/TrEMBL
  RNaseH_sf UniProtKB/TrEMBL
  TREX1/2 UniProtKB/TrEMBL
KEGG Report ssc:100518818 UniProtKB/TrEMBL
NCBI Gene HAUS7 ENTREZGENE
PANTHER HAUS AUGMIN-LIKE COMPLEX SUBUNIT 7 UniProtKB/TrEMBL
  PTHR13058 UniProtKB/TrEMBL
  PTHR13058:SF24 UniProtKB/TrEMBL
  PTHR14352 UniProtKB/TrEMBL
Pfam RNase_T UniProtKB/TrEMBL
SMART EXOIII UniProtKB/TrEMBL
Superfamily-SCOP SSF53098 UniProtKB/TrEMBL
UniProt A0A4X1SZX4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0TDS5_PIG UniProtKB/TrEMBL
  A0A8D1IN21_PIG UniProtKB/TrEMBL
  A0A8D1IP92_PIG UniProtKB/TrEMBL
  A0A8D1NJR9_PIG UniProtKB/TrEMBL
  A0A8D1Q4E8_PIG UniProtKB/TrEMBL
  A0A8D1TYF6_PIG UniProtKB/TrEMBL
  F1S2B5 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:98031 ENTREZGENE