PBRM1 (polybromo 1) - Rat Genome Database

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Gene: PBRM1 (polybromo 1) Sus scrofa
Analyze
Symbol: PBRM1
Name: polybromo 1
RGD ID: 14279229
Description: ENCODES a protein that exhibits chromatin binding (inferred); DNA binding (inferred); INVOLVED IN blastocyst formation (ortholog); heart development (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN altered SWI/SNF family mediated chromatin remodeling pathway; histone modification pathway; pancreatic cancer pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN kinetochore (ortholog); nucleoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: PB1; protein polybromo-1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1334,689,726 - 34,820,952 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11334,689,718 - 34,821,117 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21337,897,740 - 38,020,410 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
kinetochore  (ISO)
membrane  (IEA)
nucleoplasm  (ISO)
nucleus  (IEA)
RSC-type complex  (IBA,IEA)
SWI/SNF complex  (IBA,IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
PBRM1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1334,689,726 - 34,820,952 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11334,689,718 - 34,821,117 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21337,897,740 - 38,020,410 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PBRM1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38352,545,367 - 52,685,913 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl352,545,352 - 52,685,917 (-)EnsemblGRCh38hg38GRCh38
GRCh37352,579,383 - 52,719,929 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36352,554,423 - 52,694,892 (-)NCBINCBI36Build 36hg18NCBI36
Celera352,558,739 - 52,698,578 (-)NCBICelera
Cytogenetic Map3p21.1NCBI
HuRef352,641,983 - 52,781,706 (-)NCBIHuRef
CHM1_1352,531,687 - 52,671,935 (-)NCBICHM1_1
T2T-CHM13v2.0352,578,272 - 52,718,824 (-)NCBIT2T-CHM13v2.0
Pbrm1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391430,741,095 - 30,843,549 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1430,741,095 - 30,843,549 (+)EnsemblGRCm39 Ensembl
GRCm381431,019,138 - 31,121,592 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1431,019,138 - 31,121,592 (+)EnsemblGRCm38mm10GRCm38
MGSCv371431,832,324 - 31,934,778 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361429,848,147 - 29,950,601 (+)NCBIMGSCv36mm8
Celera1427,276,955 - 27,380,012 (+)NCBICelera
Cytogenetic Map14BNCBI
cM Map1419.09NCBI
Pbrm1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8166,219,933 - 6,319,336 (+)NCBIGRCr8
mRatBN7.2166,213,507 - 6,312,895 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl166,213,300 - 6,311,780 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0167,103,714 - 7,202,899 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl167,103,998 - 7,200,362 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0167,032,357 - 7,131,462 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4166,456,202 - 6,550,030 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera168,876,544 - 8,975,777 (-)NCBICelera
Cytogenetic Map16p16NCBI
Pbrm1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554302,536,086 - 2,670,617 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554302,536,086 - 2,671,094 (-)NCBIChiLan1.0ChiLan1.0
PBRM1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2252,540,228 - 52,679,579 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1352,545,000 - 52,684,270 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0352,487,083 - 52,626,418 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1353,715,342 - 53,854,267 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl353,718,051 - 53,850,146 (-)Ensemblpanpan1.1panPan2
PBRM1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12037,110,437 - 37,231,676 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2037,110,766 - 37,229,203 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2037,092,491 - 37,213,642 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02037,463,772 - 37,581,266 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2037,461,244 - 37,579,507 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12036,824,752 - 36,945,835 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02037,233,387 - 37,354,437 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02037,510,917 - 37,632,467 (+)NCBIUU_Cfam_GSD_1.0
Pbrm1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118170,244,058 - 170,337,482 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364733,382,260 - 3,476,052 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364733,382,618 - 3,476,049 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PBRM1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12213,914,023 - 14,059,221 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2213,913,285 - 14,055,254 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041152,840,917 - 152,986,296 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pbrm1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248224,529,007 - 4,663,165 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248224,529,350 - 4,666,714 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in PBRM1
2061 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 10 2 3 5 2 23 1 3 3
Low 2 1
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_021068902 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021068903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021068904 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021068905 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021068906 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021068907 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021068908 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021068909 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021068911 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021068912 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021068913 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021068914 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021068915 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021068916 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021068917 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021068918 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021068919 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021068920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021068921 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021068922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021068923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021068924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021068925 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021068927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021068928 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK231880 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK345491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK389997 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU550676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GBZA01000467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSSSCT00000041273   ⟹   ENSSSCP00000039895
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1334,689,727 - 34,820,452 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000044065   ⟹   ENSSSCP00000035942
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1334,690,342 - 34,820,504 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000048799   ⟹   ENSSSCP00000046027
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1334,689,726 - 34,820,952 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000057913   ⟹   ENSSSCP00000050654
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1334,689,726 - 34,820,952 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000058421   ⟹   ENSSSCP00000056359
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1334,689,726 - 34,820,952 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000058608   ⟹   ENSSSCP00000049909
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1334,690,216 - 34,820,399 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000059908   ⟹   ENSSSCP00000036651
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1334,690,210 - 34,820,952 (-)Ensembl
RefSeq Acc Id: XM_021068902   ⟹   XP_020924561
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11334,689,718 - 34,821,117 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021068903   ⟹   XP_020924562
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11334,690,159 - 34,821,117 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021068904   ⟹   XP_020924563
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11334,690,159 - 34,821,117 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021068905   ⟹   XP_020924564
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11334,690,159 - 34,821,117 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021068906   ⟹   XP_020924565
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11334,689,718 - 34,821,117 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021068907   ⟹   XP_020924566
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11334,689,718 - 34,821,117 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021068908   ⟹   XP_020924567
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11334,689,718 - 34,821,117 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021068909   ⟹   XP_020924568
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11334,689,718 - 34,821,117 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021068911   ⟹   XP_020924570
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11334,690,159 - 34,821,117 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021068912   ⟹   XP_020924571
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11334,690,159 - 34,821,117 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021068913   ⟹   XP_020924572
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11334,690,159 - 34,820,502 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021068914   ⟹   XP_020924573
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11334,690,159 - 34,820,201 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021068915   ⟹   XP_020924574
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11334,690,159 - 34,820,446 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021068916   ⟹   XP_020924575
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11334,690,159 - 34,820,466 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021068917   ⟹   XP_020924576
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11334,690,159 - 34,820,446 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021068918   ⟹   XP_020924577
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11334,690,159 - 34,820,502 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021068919   ⟹   XP_020924578
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11334,690,159 - 34,820,201 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021068920   ⟹   XP_020924579
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11334,690,159 - 34,820,422 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021068921   ⟹   XP_020924580
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11334,690,159 - 34,820,193 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021068922   ⟹   XP_020924581
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11334,690,159 - 34,820,502 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021068923   ⟹   XP_020924582
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11334,690,159 - 34,820,188 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021068924   ⟹   XP_020924583
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11334,690,159 - 34,820,173 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021068925   ⟹   XP_020924584
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11334,690,159 - 34,820,502 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021068927   ⟹   XP_020924586
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11334,690,159 - 34,820,466 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021068928   ⟹   XP_020924587
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11334,689,718 - 34,820,502 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_020924561 (Get FASTA)   NCBI Sequence Viewer  
  XP_020924562 (Get FASTA)   NCBI Sequence Viewer  
  XP_020924563 (Get FASTA)   NCBI Sequence Viewer  
  XP_020924564 (Get FASTA)   NCBI Sequence Viewer  
  XP_020924565 (Get FASTA)   NCBI Sequence Viewer  
  XP_020924566 (Get FASTA)   NCBI Sequence Viewer  
  XP_020924567 (Get FASTA)   NCBI Sequence Viewer  
  XP_020924568 (Get FASTA)   NCBI Sequence Viewer  
  XP_020924570 (Get FASTA)   NCBI Sequence Viewer  
  XP_020924571 (Get FASTA)   NCBI Sequence Viewer  
  XP_020924572 (Get FASTA)   NCBI Sequence Viewer  
  XP_020924573 (Get FASTA)   NCBI Sequence Viewer  
  XP_020924574 (Get FASTA)   NCBI Sequence Viewer  
  XP_020924575 (Get FASTA)   NCBI Sequence Viewer  
  XP_020924576 (Get FASTA)   NCBI Sequence Viewer  
  XP_020924577 (Get FASTA)   NCBI Sequence Viewer  
  XP_020924578 (Get FASTA)   NCBI Sequence Viewer  
  XP_020924579 (Get FASTA)   NCBI Sequence Viewer  
  XP_020924580 (Get FASTA)   NCBI Sequence Viewer  
  XP_020924581 (Get FASTA)   NCBI Sequence Viewer  
  XP_020924582 (Get FASTA)   NCBI Sequence Viewer  
  XP_020924583 (Get FASTA)   NCBI Sequence Viewer  
  XP_020924584 (Get FASTA)   NCBI Sequence Viewer  
  XP_020924586 (Get FASTA)   NCBI Sequence Viewer  
  XP_020924587 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000035942
  ENSSSCP00000035942.3
  ENSSSCP00000036651
  ENSSSCP00000036651.2
  ENSSSCP00000039895
  ENSSSCP00000039895.1
  ENSSSCP00000046027
  ENSSSCP00000046027.1
  ENSSSCP00000049909
  ENSSSCP00000049909.2
  ENSSSCP00000050654
  ENSSSCP00000050654.2
  ENSSSCP00000056359
  ENSSSCP00000056359.2
  ENSSSCP00005010708.1
  ENSSSCP00005010829.1
  ENSSSCP00005011039.1
  ENSSSCP00005011062.1
  ENSSSCP00005011167.1
  ENSSSCP00005011209.1
  ENSSSCP00005011254.1
  ENSSSCP00015043199.1
  ENSSSCP00015043320.1
  ENSSSCP00015043357.1
  ENSSSCP00015043431.1
  ENSSSCP00015043636.1
  ENSSSCP00015043778.1
  ENSSSCP00025009598.1
  ENSSSCP00025009615.1
  ENSSSCP00025009650.1
  ENSSSCP00025009693.1
  ENSSSCP00025009785.1
  ENSSSCP00025009805.1
  ENSSSCP00030046309.1
  ENSSSCP00030046374.1
  ENSSSCP00030046385.1
  ENSSSCP00030046449.1
  ENSSSCP00030046533.1
  ENSSSCP00030046582.1
  ENSSSCP00035040467.1
  ENSSSCP00035040506.1
  ENSSSCP00035040517.1
  ENSSSCP00035040564.1
  ENSSSCP00035040633.1
  ENSSSCP00035040644.1
  ENSSSCP00035040667.1
  ENSSSCP00040047581.1
  ENSSSCP00040047590.1
  ENSSSCP00040047600.1
  ENSSSCP00040047693.1
  ENSSSCP00040047698.1
  ENSSSCP00040047704.1
  ENSSSCP00040047722.1
  ENSSSCP00040047734.1
  ENSSSCP00040047740.1
  ENSSSCP00045015564.1
  ENSSSCP00045015607.1
  ENSSSCP00045015705.1
  ENSSSCP00045015740.1
  ENSSSCP00045015788.1
  ENSSSCP00045015821.1
  ENSSSCP00045015875.1
  ENSSSCP00045015904.1
  ENSSSCP00050044785.1
  ENSSSCP00050044789.1
  ENSSSCP00050044791.1
  ENSSSCP00050044796.1
  ENSSSCP00050044808.1
  ENSSSCP00050044810.1
  ENSSSCP00050044811.1
  ENSSSCP00055048519.1
  ENSSSCP00055048529.1
  ENSSSCP00055048560.1
  ENSSSCP00055048653.1
  ENSSSCP00055048661.1
  ENSSSCP00055048670.1
  ENSSSCP00055048680.1
  ENSSSCP00055048709.1
  ENSSSCP00055048722.1
  ENSSSCP00055048734.1
  ENSSSCP00060018818.1
  ENSSSCP00060018820.1
  ENSSSCP00060018824.1
  ENSSSCP00060018850.1
  ENSSSCP00060018863.1
  ENSSSCP00060018866.1
  ENSSSCP00070043085.1
  ENSSSCP00070043092.1
  ENSSSCP00070043093.1
  ENSSSCP00070043095.1
  ENSSSCP00070043098.1
GenBank Protein JAG69301 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_020924568   ⟸   XM_021068909
- Peptide Label: isoform X8
- UniProtKB: A0A286ZYW1 (UniProtKB/TrEMBL),   A0A8D0Q470 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020924567   ⟸   XM_021068908
- Peptide Label: isoform X7
- UniProtKB: A0A8D2BHF8 (UniProtKB/TrEMBL),   A0A8D0Q470 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020924566   ⟸   XM_021068907
- Peptide Label: isoform X6
- UniProtKB: A0A8D1CI16 (UniProtKB/TrEMBL),   A0A8D0Q470 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020924565   ⟸   XM_021068906
- Peptide Label: isoform X5
- UniProtKB: A0A8D1G3Y0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020924561   ⟸   XM_021068902
- Peptide Label: isoform X1
- UniProtKB: A0A8D0Q3M2 (UniProtKB/TrEMBL),   A0A287B3H8 (UniProtKB/TrEMBL),   A0A8D1G3Y0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020924587   ⟸   XM_021068928
- Peptide Label: isoform X21
- UniProtKB: A0A481AKX4 (UniProtKB/TrEMBL),   A0A8D1HFX0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020924564   ⟸   XM_021068905
- Peptide Label: isoform X4
- UniProtKB: A0A287BJ09 (UniProtKB/TrEMBL),   A0A8D1G3Y0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020924563   ⟸   XM_021068904
- Peptide Label: isoform X3
- UniProtKB: A0A8D1G3Y0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020924571   ⟸   XM_021068912
- Peptide Label: isoform X10
- UniProtKB: A0A8D1V4A8 (UniProtKB/TrEMBL),   A0A8D0Q3T1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020924562   ⟸   XM_021068903
- Peptide Label: isoform X2
- UniProtKB: A0A287APN6 (UniProtKB/TrEMBL),   A0A8D0Q3P6 (UniProtKB/TrEMBL),   A0A8D1G3Y0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020924570   ⟸   XM_021068911
- Peptide Label: isoform X9
- UniProtKB: A0A8D0Q3T1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020924581   ⟸   XM_021068922
- Peptide Label: isoform X17
- UniProtKB: A0A8D0R1W4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020924577   ⟸   XM_021068918
- Peptide Label: isoform X15
- UniProtKB: A0A8D0R1W4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020924584   ⟸   XM_021068925
- Peptide Label: isoform X19
- UniProtKB: A0A480T607 (UniProtKB/TrEMBL),   A0A8D1HFX0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020924572   ⟸   XM_021068913
- Peptide Label: isoform X11
- UniProtKB: A0A4X1VMN5 (UniProtKB/TrEMBL),   A0A8D0R9B1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020924586   ⟸   XM_021068927
- Peptide Label: isoform X20
- UniProtKB: A0A8D1SPQ8 (UniProtKB/TrEMBL),   A0A8D1HFX0 (UniProtKB/TrEMBL),   A0A8D1B6U8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020924575   ⟸   XM_021068916
- Peptide Label: isoform X13
- UniProtKB: A0A287B172 (UniProtKB/TrEMBL),   A0A8D0R9B1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020924576   ⟸   XM_021068917
- Peptide Label: isoform X14
- UniProtKB: A0A8D0R9B1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020924574   ⟸   XM_021068915
- Peptide Label: isoform X12
- UniProtKB: A0A8D0R9B1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020924579   ⟸   XM_021068920
- Peptide Label: isoform X16
- UniProtKB: A0A8D0R1W4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020924578   ⟸   XM_021068919
- Peptide Label: isoform X16
- UniProtKB: A0A8D0R1W4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020924573   ⟸   XM_021068914
- Peptide Label: isoform X11
- UniProtKB: A0A4X1VMN5 (UniProtKB/TrEMBL),   A0A8D0R9B1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020924580   ⟸   XM_021068921
- Peptide Label: isoform X16
- UniProtKB: A0A8D0R1W4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020924582   ⟸   XM_021068923
- Peptide Label: isoform X18
- UniProtKB: A0A8D0R1W4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020924583   ⟸   XM_021068924
- Peptide Label: isoform X18
- UniProtKB: A0A8D0R1W4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000046027   ⟸   ENSSSCT00000048799
RefSeq Acc Id: ENSSSCP00000056359   ⟸   ENSSSCT00000058421
RefSeq Acc Id: ENSSSCP00000049909   ⟸   ENSSSCT00000058608
RefSeq Acc Id: ENSSSCP00000035942   ⟸   ENSSSCT00000044065
RefSeq Acc Id: ENSSSCP00000039895   ⟸   ENSSSCT00000041273
RefSeq Acc Id: ENSSSCP00000036651   ⟸   ENSSSCT00000059908
RefSeq Acc Id: ENSSSCP00000050654   ⟸   ENSSSCT00000057913
Protein Domains
BAH   Bromo   HMG box


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000035824 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00005010845 UniProtKB/TrEMBL
  ENSSSCG00015074941 UniProtKB/TrEMBL
  ENSSSCG00025016746 UniProtKB/TrEMBL
  ENSSSCG00030071193 UniProtKB/TrEMBL
  ENSSSCG00035070377 UniProtKB/TrEMBL
  ENSSSCG00040045586 UniProtKB/TrEMBL
  ENSSSCG00045012819 UniProtKB/TrEMBL
  ENSSSCG00050074972 UniProtKB/TrEMBL
  ENSSSCG00055020282 UniProtKB/TrEMBL
  ENSSSCG00060032472 UniProtKB/TrEMBL
  ENSSSCG00070025498 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000041273 ENTREZGENE
  ENSSSCT00000041273.2 UniProtKB/TrEMBL
  ENSSSCT00000044065 ENTREZGENE
  ENSSSCT00000044065.3 UniProtKB/TrEMBL
  ENSSSCT00000048799 ENTREZGENE
  ENSSSCT00000048799.3 UniProtKB/TrEMBL
  ENSSSCT00000057913 ENTREZGENE
  ENSSSCT00000057913.3 UniProtKB/TrEMBL
  ENSSSCT00000058421 ENTREZGENE
  ENSSSCT00000058421.3 UniProtKB/TrEMBL
  ENSSSCT00000058608 ENTREZGENE
  ENSSSCT00000058608.3 UniProtKB/TrEMBL
  ENSSSCT00000059908 ENTREZGENE
  ENSSSCT00000059908.3 UniProtKB/TrEMBL
  ENSSSCT00005017887.1 UniProtKB/TrEMBL
  ENSSSCT00005018110.1 UniProtKB/TrEMBL
  ENSSSCT00005018393.1 UniProtKB/TrEMBL
  ENSSSCT00005018425.1 UniProtKB/TrEMBL
  ENSSSCT00005018570.1 UniProtKB/TrEMBL
  ENSSSCT00005018640.1 UniProtKB/TrEMBL
  ENSSSCT00005018740.1 UniProtKB/TrEMBL
  ENSSSCT00015103573.1 UniProtKB/TrEMBL
  ENSSSCT00015103755.1 UniProtKB/TrEMBL
  ENSSSCT00015103846.1 UniProtKB/TrEMBL
  ENSSSCT00015103985.1 UniProtKB/TrEMBL
  ENSSSCT00015104412.1 UniProtKB/TrEMBL
  ENSSSCT00015104656.1 UniProtKB/TrEMBL
  ENSSSCT00025023021.1 UniProtKB/TrEMBL
  ENSSSCT00025023058.1 UniProtKB/TrEMBL
  ENSSSCT00025023123.1 UniProtKB/TrEMBL
  ENSSSCT00025023201.1 UniProtKB/TrEMBL
  ENSSSCT00025023399.1 UniProtKB/TrEMBL
  ENSSSCT00025023436.1 UniProtKB/TrEMBL
  ENSSSCT00030100448.1 UniProtKB/TrEMBL
  ENSSSCT00030100581.1 UniProtKB/TrEMBL
  ENSSSCT00030100606.1 UniProtKB/TrEMBL
  ENSSSCT00030100721.1 UniProtKB/TrEMBL
  ENSSSCT00030100882.1 UniProtKB/TrEMBL
  ENSSSCT00030100974.1 UniProtKB/TrEMBL
  ENSSSCT00035096201.1 UniProtKB/TrEMBL
  ENSSSCT00035096273.1 UniProtKB/TrEMBL
  ENSSSCT00035096294.1 UniProtKB/TrEMBL
  ENSSSCT00035096370.1 UniProtKB/TrEMBL
  ENSSSCT00035096482.1 UniProtKB/TrEMBL
  ENSSSCT00035096509.1 UniProtKB/TrEMBL
  ENSSSCT00035096545.1 UniProtKB/TrEMBL
  ENSSSCT00040104443.1 UniProtKB/TrEMBL
  ENSSSCT00040104458.1 UniProtKB/TrEMBL
  ENSSSCT00040104475.1 UniProtKB/TrEMBL
  ENSSSCT00040104596.1 UniProtKB/TrEMBL
  ENSSSCT00040104605.1 UniProtKB/TrEMBL
  ENSSSCT00040104611.1 UniProtKB/TrEMBL
  ENSSSCT00040104641.1 UniProtKB/TrEMBL
  ENSSSCT00040104664.1 UniProtKB/TrEMBL
  ENSSSCT00040104677.1 UniProtKB/TrEMBL
  ENSSSCT00045022569.1 UniProtKB/TrEMBL
  ENSSSCT00045022636.1 UniProtKB/TrEMBL
  ENSSSCT00045022763.1 UniProtKB/TrEMBL
  ENSSSCT00045022814.1 UniProtKB/TrEMBL
  ENSSSCT00045022887.1 UniProtKB/TrEMBL
  ENSSSCT00045022936.1 UniProtKB/TrEMBL
  ENSSSCT00045022997.1 UniProtKB/TrEMBL
  ENSSSCT00045023032.1 UniProtKB/TrEMBL
  ENSSSCT00050102726.1 UniProtKB/TrEMBL
  ENSSSCT00050102732.1 UniProtKB/TrEMBL
  ENSSSCT00050102734.1 UniProtKB/TrEMBL
  ENSSSCT00050102741.1 UniProtKB/TrEMBL
  ENSSSCT00050102756.1 UniProtKB/TrEMBL
  ENSSSCT00050102759.1 UniProtKB/TrEMBL
  ENSSSCT00050102760.1 UniProtKB/TrEMBL
  ENSSSCT00055060562.1 UniProtKB/TrEMBL
  ENSSSCT00055060574.1 UniProtKB/TrEMBL
  ENSSSCT00055060610.1 UniProtKB/TrEMBL
  ENSSSCT00055060716.1 UniProtKB/TrEMBL
  ENSSSCT00055060726.1 UniProtKB/TrEMBL
  ENSSSCT00055060738.1 UniProtKB/TrEMBL
  ENSSSCT00055060749.1 UniProtKB/TrEMBL
  ENSSSCT00055060785.1 UniProtKB/TrEMBL
  ENSSSCT00055060798.1 UniProtKB/TrEMBL
  ENSSSCT00055060810.1 UniProtKB/TrEMBL
  ENSSSCT00060044132.1 UniProtKB/TrEMBL
  ENSSSCT00060044136.1 UniProtKB/TrEMBL
  ENSSSCT00060044148.1 UniProtKB/TrEMBL
  ENSSSCT00060044193.1 UniProtKB/TrEMBL
  ENSSSCT00060044218.1 UniProtKB/TrEMBL
  ENSSSCT00060044226.1 UniProtKB/TrEMBL
  ENSSSCT00070050962.1 UniProtKB/TrEMBL
  ENSSSCT00070050970.1 UniProtKB/TrEMBL
  ENSSSCT00070050971.1 UniProtKB/TrEMBL
  ENSSSCT00070050973.1 UniProtKB/TrEMBL
  ENSSSCT00070050976.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.920.10 UniProtKB/TrEMBL
  2.30.30.490 UniProtKB/TrEMBL
InterPro BAH_dom UniProtKB/TrEMBL
  BAH_sf UniProtKB/TrEMBL
  Bromodomain UniProtKB/TrEMBL
  Bromodomain-like_sf UniProtKB/TrEMBL
  Bromodomain_CS UniProtKB/TrEMBL
  HMG_box_dom UniProtKB/TrEMBL
  HMG_box_dom_sf UniProtKB/TrEMBL
  PBRM1_BD5 UniProtKB/TrEMBL
  Rsc/polybromo UniProtKB/TrEMBL
NCBI Gene PBRM1 ENTREZGENE
PANTHER PROTEIN POLYBROMO-1 UniProtKB/TrEMBL
  PTHR16062 UniProtKB/TrEMBL
Pfam BAH UniProtKB/TrEMBL
  Bromodomain UniProtKB/TrEMBL
  HMG_box UniProtKB/TrEMBL
PRINTS BROMODOMAIN UniProtKB/TrEMBL
PROSITE BAH UniProtKB/TrEMBL
  BROMODOMAIN_1 UniProtKB/TrEMBL
  BROMODOMAIN_2 UniProtKB/TrEMBL
  HMG_BOX_2 UniProtKB/TrEMBL
SMART BAH UniProtKB/TrEMBL
  BROMO UniProtKB/TrEMBL
  HMG UniProtKB/TrEMBL
Superfamily-SCOP SSF47095 UniProtKB/TrEMBL
  SSF47370 UniProtKB/TrEMBL
UniProt A0A286ZYW1 ENTREZGENE, UniProtKB/TrEMBL
  A0A287A7Z8_PIG UniProtKB/TrEMBL
  A0A287APN6 ENTREZGENE, UniProtKB/TrEMBL
  A0A287B172 ENTREZGENE, UniProtKB/TrEMBL
  A0A287B3H8 ENTREZGENE, UniProtKB/TrEMBL
  A0A287BJ09 ENTREZGENE, UniProtKB/TrEMBL
  A0A480T607 ENTREZGENE, UniProtKB/TrEMBL
  A0A481AKX4 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1VM38_PIG UniProtKB/TrEMBL
  A0A4X1VM48_PIG UniProtKB/TrEMBL
  A0A4X1VMN5 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1VMP1_PIG UniProtKB/TrEMBL
  A0A4X1VNL7_PIG UniProtKB/TrEMBL
  A0A8D0IBT7_PIG UniProtKB/TrEMBL
  A0A8D0IIM3_PIG UniProtKB/TrEMBL
  A0A8D0IIX9_PIG UniProtKB/TrEMBL
  A0A8D0IM84_PIG UniProtKB/TrEMBL
  A0A8D0Q3M2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0Q3P6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0Q3T1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0Q470 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0R1W4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0R9B1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0UJM7_PIG UniProtKB/TrEMBL
  A0A8D0Y393_PIG UniProtKB/TrEMBL
  A0A8D1B6U8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1CI16 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1G3Y0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1H917_PIG UniProtKB/TrEMBL
  A0A8D1H9D2_PIG UniProtKB/TrEMBL
  A0A8D1H9R5_PIG UniProtKB/TrEMBL
  A0A8D1H9S8_PIG UniProtKB/TrEMBL
  A0A8D1HAF7_PIG UniProtKB/TrEMBL
  A0A8D1HC68_PIG UniProtKB/TrEMBL
  A0A8D1HFT0_PIG UniProtKB/TrEMBL
  A0A8D1HFX0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1SFZ7_PIG UniProtKB/TrEMBL
  A0A8D1SIA1_PIG UniProtKB/TrEMBL
  A0A8D1SKK1_PIG UniProtKB/TrEMBL
  A0A8D1SPF1_PIG UniProtKB/TrEMBL
  A0A8D1SPQ8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1TQI0_PIG UniProtKB/TrEMBL
  A0A8D1UF12_PIG UniProtKB/TrEMBL
  A0A8D1V4A8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D2BHF8 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A0A286ZWC8 UniProtKB/TrEMBL
  A0A8D0R277 UniProtKB/TrEMBL
VGNC ID VGNC:91202 ENTREZGENE