BSPRY (B-box and SPRY domain containing) - Rat Genome Database

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Gene: BSPRY (B-box and SPRY domain containing) Sus scrofa
Analyze
Symbol: BSPRY
Name: B-box and SPRY domain containing
RGD ID: 14265073
Description: ENCODES a protein that exhibits ubiquitin protein ligase activity (inferred); zinc ion binding (inferred); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cell leading edge (ortholog); perinuclear region of cytoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: B box and SPRY domain-containing protein
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1253,975,973 - 254,003,162 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11253,975,979 - 254,003,169 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21284,757,676 - 284,772,898 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
BSPRY
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1253,975,973 - 254,003,162 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11253,975,979 - 254,003,169 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21284,757,676 - 284,772,898 (+)NCBISscrofa10.2Sscrofa10.2susScr3
BSPRY
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389113,349,541 - 113,371,222 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9113,349,541 - 113,371,233 (+)EnsemblGRCh38hg38GRCh38
GRCh379116,111,821 - 116,133,502 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 369115,151,633 - 115,173,334 (+)NCBINCBI36Build 36hg18NCBI36
Build 349113,196,098 - 113,213,058NCBI
Celera986,759,422 - 86,781,124 (+)NCBICelera
Cytogenetic Map9q32NCBI
HuRef985,719,212 - 85,740,717 (+)NCBIHuRef
CHM1_19116,258,468 - 116,280,145 (+)NCBICHM1_1
T2T-CHM13v2.09125,548,355 - 125,570,031 (+)NCBIT2T-CHM13v2.0
Bspry
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39462,398,248 - 62,415,537 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl462,398,290 - 62,415,535 (+)EnsemblGRCm39 Ensembl
GRCm38462,480,011 - 62,497,300 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl462,480,053 - 62,497,298 (+)EnsemblGRCm38mm10GRCm38
MGSCv37462,141,101 - 62,158,332 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36461,966,428 - 61,983,659 (+)NCBIMGSCv36mm8
Celera461,150,214 - 61,167,438 (+)NCBICelera
Cytogenetic Map4B3NCBI
cM Map433.16NCBI
Bspry
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8580,942,974 - 80,965,157 (+)NCBIGRCr8
mRatBN7.2575,927,397 - 75,949,585 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl575,927,405 - 75,949,583 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx578,326,720 - 78,348,902 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0580,143,817 - 80,165,999 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0580,119,331 - 80,141,514 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0578,334,284 - 78,356,462 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl578,334,284 - 78,356,460 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0582,453,655 - 82,475,833 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4579,471,061 - 79,493,239 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1579,488,492 - 79,497,552 (+)NCBI
Celera574,869,050 - 74,891,031 (+)NCBICelera
Cytogenetic Map5q24NCBI
Bspry
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541914,124,980 - 14,136,199 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541914,124,167 - 14,139,181 (-)NCBIChiLan1.0ChiLan1.0
BSPRY
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21126,002,804 - 26,024,443 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1926,005,163 - 26,026,801 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0984,451,214 - 84,472,861 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19112,827,202 - 112,844,099 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9112,822,701 - 112,843,006 (+)Ensemblpanpan1.1panPan2
BSPRY
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11167,702,949 - 67,726,809 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1167,704,845 - 67,726,155 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1166,114,301 - 66,131,637 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01168,834,003 - 68,851,307 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1168,833,789 - 68,850,651 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11167,351,904 - 67,369,222 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01167,383,003 - 67,400,285 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01168,119,966 - 68,137,285 (+)NCBIUU_Cfam_GSD_1.0
Bspry
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947183,004,593 - 183,016,404 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936559249,836 - 261,956 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936559250,150 - 261,950 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BSPRY
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11226,201,273 - 26,224,317 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603516,577,381 - 16,600,243 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Bspry
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476021,734,140 - 21,750,729 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476021,733,259 - 21,750,733 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in BSPRY
1269 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 1
Low 8 1 3 4 1 20 2 3 1
Below cutoff 1 3 1 3 1

Sequence


RefSeq Acc Id: ENSSSCT00000022931   ⟹   ENSSSCP00000026138
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1253,975,973 - 254,003,162 (+)Ensembl
RefSeq Acc Id: XM_021067718   ⟹   XP_020923377
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11253,975,979 - 254,003,169 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021067724   ⟹   XP_020923383
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11253,975,983 - 254,003,169 (+)NCBI
Sequence:
RefSeq Acc Id: XP_020923377   ⟸   XM_021067718
- Peptide Label: isoform X1
- UniProtKB: A0A8D1DFJ3 (UniProtKB/TrEMBL),   I3LPW1 (UniProtKB/TrEMBL),   A0A8D1BXD8 (UniProtKB/TrEMBL),   A0A8D1N420 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020923383   ⟸   XM_021067724
- Peptide Label: isoform X2
- UniProtKB: A0A8D1BXD8 (UniProtKB/TrEMBL),   A0A8D1N420 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000026138   ⟸   ENSSSCT00000022931
Protein Domains
B30.2/SPRY


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000021173 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015021131 UniProtKB/TrEMBL
  ENSSSCG00025040135 UniProtKB/TrEMBL
  ENSSSCG00030007868 UniProtKB/TrEMBL
  ENSSSCG00035040850 UniProtKB/TrEMBL
  ENSSSCG00040012171 UniProtKB/TrEMBL
  ENSSSCG00045029012 UniProtKB/TrEMBL
  ENSSSCG00050053008 UniProtKB/TrEMBL
  ENSSSCG00055022256 UniProtKB/TrEMBL
  ENSSSCG00060049654 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000022931 ENTREZGENE
  ENSSSCT00000022931.2 UniProtKB/TrEMBL
  ENSSSCT00015027950.1 UniProtKB/TrEMBL
  ENSSSCT00025054505.1 UniProtKB/TrEMBL
  ENSSSCT00030010589.1 UniProtKB/TrEMBL
  ENSSSCT00030010602.1 UniProtKB/TrEMBL
  ENSSSCT00035054284.1 UniProtKB/TrEMBL
  ENSSSCT00040015998.1 UniProtKB/TrEMBL
  ENSSSCT00045049533.1 UniProtKB/TrEMBL
  ENSSSCT00050072177.1 UniProtKB/TrEMBL
  ENSSSCT00055043731.1 UniProtKB/TrEMBL
  ENSSSCT00060067433.1 UniProtKB/TrEMBL
  ENSSSCT00060067443.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.120.920 UniProtKB/TrEMBL
  Classic Zinc Finger UniProtKB/TrEMBL
InterPro B30.2/SPRY UniProtKB/TrEMBL
  B30.2/SPRY_sf UniProtKB/TrEMBL
  Butyrophylin_SPRY UniProtKB/TrEMBL
  ConA-like_dom_sf UniProtKB/TrEMBL
  PRY UniProtKB/TrEMBL
  SPRY_dom UniProtKB/TrEMBL
  Znf_B-box UniProtKB/TrEMBL
NCBI Gene BSPRY ENTREZGENE
PANTHER B BOX AND SPRY DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
  E3 UBIQUITIN-PROTEIN LIGASE TRIM UniProtKB/TrEMBL
Pfam PRY UniProtKB/TrEMBL
  SPRY UniProtKB/TrEMBL
  zf-B_box UniProtKB/TrEMBL
PRINTS BUTYPHLNCDUF UniProtKB/TrEMBL
PROSITE B302_SPRY UniProtKB/TrEMBL
SMART PRY UniProtKB/TrEMBL
  SPRY UniProtKB/TrEMBL
Superfamily-SCOP B-box zinc-binding domain UniProtKB/TrEMBL
  SSF49899 UniProtKB/TrEMBL
UniProt A0A8D1BXD8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1DFJ3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1N420 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1RBH8_PIG UniProtKB/TrEMBL
  A0A8D2BM67_PIG UniProtKB/TrEMBL
  I3LPW1 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:85895 ENTREZGENE