LOC110255849 (G-protein coupled receptor 183-like) - Rat Genome Database

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Gene: LOC110255849 (G-protein coupled receptor 183-like) Sus scrofa
Analyze
Symbol: LOC110255849
Name: G-protein coupled receptor 183-like
RGD ID: 14262620
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); oxysterol binding (inferred); INVOLVED IN G protein-coupled receptor signaling pathway (inferred); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11168,334,326 - 68,342,794 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Variants

.
Variants in LOC110255849
391 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium
Low 2 2 5 2 3 1 1 1
Below cutoff 9 2 1 5 1 1 2

Sequence


Reference Sequences
RefSeq Acc Id: XM_021065853   ⟹   XP_020921512
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11168,334,326 - 68,342,794 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: XP_020921512   ⟸   XM_021065853
- UniProtKB: A0A287AQK9 (UniProtKB/TrEMBL),   A0A4X1UH03 (UniProtKB/TrEMBL),   A0A8D1J8K4 (UniProtKB/TrEMBL)
- Sequence:
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000031278 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00005023466 UniProtKB/TrEMBL
  ENSSSCG00030073894 UniProtKB/TrEMBL
  ENSSSCG00035035537 UniProtKB/TrEMBL
  ENSSSCG00040062916 UniProtKB/TrEMBL
  ENSSSCG00045037740 UniProtKB/TrEMBL
  ENSSSCG00055021018 UniProtKB/TrEMBL
  ENSSSCG00065078078 UniProtKB/TrEMBL
  ENSSSCG00070016912 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000055464 ENTREZGENE
  ENSSSCT00000055464.3 UniProtKB/TrEMBL
  ENSSSCT00005037098.1 UniProtKB/TrEMBL
  ENSSSCT00030103540.1 UniProtKB/TrEMBL
  ENSSSCT00035047103.1 UniProtKB/TrEMBL
  ENSSSCT00040085751.1 UniProtKB/TrEMBL
  ENSSSCT00045065207.1 UniProtKB/TrEMBL
  ENSSSCT00055041217.1 UniProtKB/TrEMBL
  ENSSSCT00065108065.1 UniProtKB/TrEMBL
  ENSSSCT00070033304.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GP183-like UniProtKB/TrEMBL
  GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
NCBI Gene LOC110255849 ENTREZGENE
PANTHER G-PROTEIN COUPLED RECEPTOR UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
Pfam 7tm_1 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  P2YPURNOCPTR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A287AQK9 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1UH03 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0LN53_PIG UniProtKB/TrEMBL
  A0A8D0YE04_PIG UniProtKB/TrEMBL
  A0A8D1J8K4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1KI96_PIG UniProtKB/TrEMBL