LOC110255217 (interferon lambda-3-like) - Rat Genome Database

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Gene: LOC110255217 (interferon lambda-3-like) Sus scrofa
Analyze
Symbol: LOC110255217
Name: interferon lambda-3-like
RGD ID: 14262341
Description: ENCODES a protein that exhibits cytokine activity (inferred); signaling receptor binding (inferred); INVOLVED IN mucosal immune response (ortholog); ASSOCIATED WITH genetic disease (ortholog); maturity-onset diabetes of the young type 1 (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN extracellular region (inferred); extracellular space (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1647,939,706 - 47,941,254 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
LOC110255217
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1647,939,706 - 47,941,254 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
IFNL2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381939,268,396 - 39,270,188 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1939,268,396 - 39,270,188 (+)EnsemblGRCh38hg38GRCh38
GRCh371939,759,036 - 39,760,828 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361944,450,997 - 44,452,572 (+)NCBINCBI36Build 36hg18NCBI36
Build 341944,450,996 - 44,452,572NCBI
Celera1936,560,830 - 36,562,405 (+)NCBICelera
Cytogenetic Map19q13.2NCBI
HuRef1936,205,689 - 36,207,249 (+)NCBIHuRef
CHM1_11939,759,966 - 39,761,541 (+)NCBICHM1_1
T2T-CHM13v2.01942,072,661 - 42,074,453 (+)NCBIT2T-CHM13v2.0


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_021097830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_021097830   ⟹   XP_020953489
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1647,939,706 - 47,941,254 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: XP_020953489   ⟸   XM_021097830
- UniProtKB: A0A8D0R842 (UniProtKB/TrEMBL),   K7N7E0 (UniProtKB/TrEMBL),   D0FHA1 (UniProtKB/TrEMBL),   F1SEG6 (UniProtKB/TrEMBL),   A0A4X1SX21 (UniProtKB/TrEMBL),   A0A5K1UN68 (UniProtKB/TrEMBL)
- Sequence:


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000056294 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00000057240 UniProtKB/TrEMBL
  ENSSSCG00015013173 UniProtKB/TrEMBL
  ENSSSCG00025049037 UniProtKB/TrEMBL
  ENSSSCG00025049301 UniProtKB/TrEMBL
  ENSSSCG00030011345 UniProtKB/TrEMBL
  ENSSSCG00045033260 UniProtKB/TrEMBL
  ENSSSCG00050011750 UniProtKB/TrEMBL
  ENSSSCG00055006650 UniProtKB/TrEMBL
  ENSSSCG00060009193 UniProtKB/TrEMBL
  ENSSSCG00065048707 UniProtKB/TrEMBL
  ENSSSCG00070004924 UniProtKB/TrEMBL
  ENSSSCG00070004960 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000011718 ENTREZGENE
  ENSSSCT00000011718.6 UniProtKB/TrEMBL
  ENSSSCT00000036594.4 UniProtKB/TrEMBL
  ENSSSCT00015017571.1 UniProtKB/TrEMBL
  ENSSSCT00025066821.1 UniProtKB/TrEMBL
  ENSSSCT00025067197.1 UniProtKB/TrEMBL
  ENSSSCT00030015624.1 UniProtKB/TrEMBL
  ENSSSCT00045056981.1 UniProtKB/TrEMBL
  ENSSSCT00050015817.1 UniProtKB/TrEMBL
  ENSSSCT00055012891.1 UniProtKB/TrEMBL
  ENSSSCT00060011853.1 UniProtKB/TrEMBL
  ENSSSCT00065066655.1 UniProtKB/TrEMBL
  ENSSSCT00070009327.1 UniProtKB/TrEMBL
  ENSSSCT00070009426.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1250.60 UniProtKB/TrEMBL
InterPro IFN-lambda_sf UniProtKB/TrEMBL
  INF_lambda UniProtKB/TrEMBL
NCBI Gene LOC110255217 ENTREZGENE
PANTHER INTERFERON LAMBDA-2-RELATED UniProtKB/TrEMBL
  INTERLEUKIN-28 AND 29 UniProtKB/TrEMBL
Pfam IL28A UniProtKB/TrEMBL
UniProt A0A4X1SX21 ENTREZGENE, UniProtKB/TrEMBL
  A0A5K1UN68 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0R842 ENTREZGENE
  D0FHA1 ENTREZGENE
  F1SEG6 ENTREZGENE
  K7N7E0 ENTREZGENE