KMT2D (lysine methyltransferase 2D) - Rat Genome Database

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Gene: KMT2D (lysine methyltransferase 2D) Sus scrofa
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Symbol: KMT2D
Name: lysine methyltransferase 2D
RGD ID: 14262057
Description: ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN chromatin silencing (ortholog); histone H3-K4 dimethylation (ortholog); histone H3-K4 methylation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH autosomal dominant non-syndromic intellectual disability 26 (ortholog); breast cancer (ortholog); Breast Neoplasms (ortholog); FOUND IN histone methyltransferase complex (ortholog); MLL3/4 complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOW QUALITY PROTEIN: histone-lysine N-methyltransferase 2D; lysine (K)-specific methyltransferase 2D
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1515,049,827 - 15,091,622 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Molecular Pathway Annotations     Click to see Annotation Detail View
References

Genomics

Comparative Map Data
KMT2D
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1515,049,827 - 15,091,622 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
KMT2D
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1249,018,978 - 49,060,794 (-)EnsemblGRCh38hg38GRCh38
GRCh381249,018,975 - 49,060,884 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371249,412,761 - 49,454,577 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361247,699,025 - 47,735,374 (-)NCBINCBI36hg18NCBI36
Build 341247,701,829 - 47,735,374NCBI
Celera1248,207,544 - 48,243,891 (-)NCBI
Cytogenetic Map12q13.12NCBI
HuRef1246,444,274 - 46,480,622 (-)NCBIHuRef
CHM1_11249,378,552 - 49,414,901 (-)NCBICHM1_1
Kmt2d
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391598,729,550 - 98,771,958 (-)NCBIGRCm39mm39
GRCm39 Ensembl1598,729,550 - 98,769,085 (-)Ensembl
GRCm381598,831,669 - 98,874,077 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1598,831,669 - 98,871,204 (-)EnsemblGRCm38mm10GRCm38
MGSCv371598,662,100 - 98,701,614 (-)NCBIGRCm37mm9NCBIm37
MGSCv361598,662,534 - 98,679,000 (-)NCBImm8
Celera15100,981,213 - 101,020,779 (-)NCBICelera
Cytogenetic Map15F1NCBI
Kmt2d
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.27129,980,744 - 130,022,088 (-)NCBI
Rnor_6.0 Ensembl7140,489,492 - 140,546,908 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.07140,507,137 - 140,542,479 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X115,017,255 - 115,057,219 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47137,601,739 - 137,639,556 (-)NCBIRGSC3.4rn4RGSC3.4
Celera7126,471,456 - 126,508,631 (-)NCBICelera
Cytogenetic Map7q36NCBI
Kmt2d
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555007,853,292 - 7,886,067 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555007,850,782 - 7,891,703 (-)NCBIChiLan1.0ChiLan1.0
KMT2D
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11240,570,152 - 40,611,463 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1240,575,083 - 40,608,661 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01239,689,463 - 39,731,904 (+)NCBIMhudiblu_PPA_v0panPan3
KMT2D
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1275,516,866 - 5,556,303 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl275,521,804 - 5,553,490 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2740,701,293 - 40,740,498 (-)NCBI
ROS_Cfam_1.0275,568,146 - 5,607,356 (+)NCBI
UMICH_Zoey_3.1275,532,135 - 5,571,340 (+)NCBI
UNSW_CanFamBas_1.0275,522,102 - 5,561,289 (+)NCBI
UU_Cfam_GSD_1.02741,093,630 - 41,132,835 (-)NCBI
Kmt2d
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494566,304,962 - 66,345,590 (+)NCBI
SpeTri2.0NW_0049365126,819,240 - 6,860,852 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KMT2D
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11145,260,873 - 45,303,898 (-)NCBI
ChlSab1.1 Ensembl1145,263,408 - 45,302,423 (-)Ensembl
Vero_WHO_p1.0NW_023666037200,840,502 - 200,883,190 (+)NCBI
Kmt2d
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248163,129,127 - 3,169,143 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_021091593   ⟹   XP_020947252
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1515,049,827 - 15,091,622 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_020947252 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_020947252   ⟸   XM_021091593
- Sequence:


Additional Information

Database Acc Id Source(s)
NCBI Gene KMT2D ENTREZGENE