FLII (FLII actin remodeling protein) - Rat Genome Database

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Gene: FLII (FLII actin remodeling protein) Sus scrofa
Analyze
Symbol: FLII
Name: FLII actin remodeling protein
RGD ID: 14258951
Description: ENCODES a protein that exhibits actin binding (inferred); actin filament binding (inferred); phosphatidylinositol-4,5-bisphosphate binding (inferred); INVOLVED IN actin filament severing (inferred); actin polymerization or depolymerization (inferred); barbed-end actin filament capping (inferred); ASSOCIATED WITH autistic disorder (ortholog); Birt-Hogg-Dube syndrome (ortholog); common variable immunodeficiency 2 (ortholog); FOUND IN actin cytoskeleton (inferred); brush border (inferred); centriolar satellite (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: protein flightless-1 homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1260,475,733 - 60,487,408 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11260,475,722 - 60,487,376 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
FLII
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1260,475,733 - 60,487,408 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11260,475,722 - 60,487,376 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
FLII
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381718,244,815 - 18,259,022 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1718,244,815 - 18,258,738 (-)EnsemblGRCh38hg38GRCh38
GRCh371718,148,129 - 18,162,336 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361718,088,875 - 18,102,780 (-)NCBINCBI36Build 36hg18NCBI36
Build 341718,088,879 - 18,102,780NCBI
Celera1719,089,264 - 19,103,169 (-)NCBICelera
Cytogenetic Map17p11.2NCBI
HuRef1717,901,382 - 17,915,484 (-)NCBIHuRef
CHM1_11718,156,895 - 18,171,007 (-)NCBICHM1_1
T2T-CHM13v2.01718,191,619 - 18,205,827 (-)NCBIT2T-CHM13v2.0
Flii
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391160,604,969 - 60,618,089 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1160,604,949 - 60,618,089 (-)EnsemblGRCm39 Ensembl
GRCm381160,714,143 - 60,727,263 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1160,714,123 - 60,727,263 (-)EnsemblGRCm38mm10GRCm38
MGSCv371160,527,651 - 60,540,723 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361160,530,344 - 60,543,416 (-)NCBIMGSCv36mm8
Celera1164,979,751 - 64,988,078 (-)NCBICelera
Cytogenetic Map11B2NCBI
cM Map1137.81NCBI
Flii
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81045,893,566 - 45,907,547 (-)NCBIGRCr8
mRatBN7.21045,394,032 - 45,408,051 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1045,394,032 - 45,407,970 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1050,094,677 - 50,108,557 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01049,585,065 - 49,598,945 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01045,088,662 - 45,102,542 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01046,955,460 - 46,969,468 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1046,955,487 - 46,969,406 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01046,728,454 - 46,742,443 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41046,860,271 - 46,874,196 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11046,873,899 - 46,887,819 (-)NCBI
Celera1044,649,211 - 44,663,134 (-)NCBICelera
Cytogenetic Map10q22NCBI
Flii
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495547811,062,707 - 11,075,117 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495547811,061,728 - 11,075,370 (+)NCBIChiLan1.0ChiLan1.0
FLII
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21953,006,418 - 53,021,367 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11757,717,371 - 57,732,357 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01732,789,717 - 32,803,661 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11737,953,099 - 37,965,414 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1737,949,994 - 37,965,414 (+)Ensemblpanpan1.1panPan2
FLII
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1541,303,015 - 41,314,849 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl541,302,767 - 41,314,862 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha541,441,287 - 41,454,324 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0541,409,288 - 41,421,588 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl541,409,315 - 41,421,940 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1541,376,357 - 41,389,408 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0541,323,835 - 41,336,881 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0541,515,626 - 41,528,679 (+)NCBIUU_Cfam_GSD_1.0
Flii
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560261,071,082 - 61,082,269 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367411,783,589 - 1,796,168 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367411,784,802 - 1,796,176 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FLII
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11617,285,400 - 17,300,210 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1617,285,724 - 17,300,041 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660593,602,312 - 3,617,254 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Flii
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248493,214,042 - 3,227,476 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248493,213,988 - 3,227,734 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in FLII
172 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 1 3 3 2 2 2
Low 9 1 3 2 23 2 1 1
Below cutoff

Sequence


RefSeq Acc Id: ENSSSCT00000046514   ⟹   ENSSSCP00000058522
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1260,475,734 - 60,487,408 (+)Ensembl
RefSeq Acc Id: ENSSSCT00000051763   ⟹   ENSSSCP00000034129
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1260,475,733 - 60,487,375 (+)Ensembl
RefSeq Acc Id: ENSSSCT00000061513   ⟹   ENSSSCP00000047093
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1260,475,734 - 60,487,408 (+)Ensembl
RefSeq Acc Id: ENSSSCT00000083396   ⟹   ENSSSCP00000072340
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1260,475,741 - 60,487,371 (+)Ensembl
RefSeq Acc Id: XM_021067982   ⟹   XP_020923641
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11260,475,722 - 60,487,376 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021067983   ⟹   XP_020923642
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11260,475,722 - 60,487,376 (+)NCBI
Sequence:
RefSeq Acc Id: XP_020923641   ⟸   XM_021067982
- Peptide Label: isoform X1
- UniProtKB: A0A8D1QNB9 (UniProtKB/TrEMBL),   A0A287AT54 (UniProtKB/TrEMBL),   A0A480HZP7 (UniProtKB/TrEMBL),   A0A480KP43 (UniProtKB/TrEMBL),   A0A480LBI0 (UniProtKB/TrEMBL),   A0A480Q526 (UniProtKB/TrEMBL),   A0A4X1SXB1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020923642   ⟸   XM_021067983
- Peptide Label: isoform X2
- UniProtKB: A0A480KP43 (UniProtKB/TrEMBL),   A0A480LBI0 (UniProtKB/TrEMBL),   A0A480Q526 (UniProtKB/TrEMBL),   A0A4X1SXB1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000072340   ⟸   ENSSSCT00000083396
RefSeq Acc Id: ENSSSCP00000034129   ⟸   ENSSSCT00000051763
RefSeq Acc Id: ENSSSCP00000047093   ⟸   ENSSSCT00000061513
RefSeq Acc Id: ENSSSCP00000058522   ⟸   ENSSSCT00000046514
Protein Domains
Gelsolin-like


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000039324 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00030024749 UniProtKB/TrEMBL
  ENSSSCG00035071778 UniProtKB/TrEMBL
  ENSSSCG00040037353 UniProtKB/TrEMBL
  ENSSSCG00045004071 UniProtKB/TrEMBL
  ENSSSCG00055013987 UniProtKB/TrEMBL
  ENSSSCG00060076793 UniProtKB/TrEMBL
  ENSSSCG00065047219 UniProtKB/TrEMBL
  ENSSSCG00070004375 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000046514 ENTREZGENE
  ENSSSCT00000046514.3 UniProtKB/TrEMBL
  ENSSSCT00000051763.3 UniProtKB/TrEMBL
  ENSSSCT00000061513 ENTREZGENE
  ENSSSCT00000061513.3 UniProtKB/TrEMBL
  ENSSSCT00030034554.1 UniProtKB/TrEMBL
  ENSSSCT00030034566.1 UniProtKB/TrEMBL
  ENSSSCT00030034604.1 UniProtKB/TrEMBL
  ENSSSCT00030034648.1 UniProtKB/TrEMBL
  ENSSSCT00030034666.1 UniProtKB/TrEMBL
  ENSSSCT00030034676.1 UniProtKB/TrEMBL
  ENSSSCT00030034712.1 UniProtKB/TrEMBL
  ENSSSCT00035097075.1 UniProtKB/TrEMBL
  ENSSSCT00035097137.1 UniProtKB/TrEMBL
  ENSSSCT00035097209.1 UniProtKB/TrEMBL
  ENSSSCT00035097278.1 UniProtKB/TrEMBL
  ENSSSCT00035097319.1 UniProtKB/TrEMBL
  ENSSSCT00035097405.1 UniProtKB/TrEMBL
  ENSSSCT00035097526.1 UniProtKB/TrEMBL
  ENSSSCT00040050022.1 UniProtKB/TrEMBL
  ENSSSCT00040050243.1 UniProtKB/TrEMBL
  ENSSSCT00040050606.1 UniProtKB/TrEMBL
  ENSSSCT00040050936.1 UniProtKB/TrEMBL
  ENSSSCT00040051116.1 UniProtKB/TrEMBL
  ENSSSCT00045006834.1 UniProtKB/TrEMBL
  ENSSSCT00045006858.1 UniProtKB/TrEMBL
  ENSSSCT00045006882.1 UniProtKB/TrEMBL
  ENSSSCT00045006912.1 UniProtKB/TrEMBL
  ENSSSCT00045006923.1 UniProtKB/TrEMBL
  ENSSSCT00045006929.1 UniProtKB/TrEMBL
  ENSSSCT00045006934.1 UniProtKB/TrEMBL
  ENSSSCT00055027745.1 UniProtKB/TrEMBL
  ENSSSCT00055027937.1 UniProtKB/TrEMBL
  ENSSSCT00055028300.1 UniProtKB/TrEMBL
  ENSSSCT00055028493.1 UniProtKB/TrEMBL
  ENSSSCT00060105473.1 UniProtKB/TrEMBL
  ENSSSCT00060105607.1 UniProtKB/TrEMBL
  ENSSSCT00060105722.1 UniProtKB/TrEMBL
  ENSSSCT00060105752.1 UniProtKB/TrEMBL
  ENSSSCT00065065100.1 UniProtKB/TrEMBL
  ENSSSCT00065065123.1 UniProtKB/TrEMBL
  ENSSSCT00065065189.1 UniProtKB/TrEMBL
  ENSSSCT00065065200.1 UniProtKB/TrEMBL
  ENSSSCT00070008427.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.20.10 UniProtKB/TrEMBL
  3.80.10.10 UniProtKB/TrEMBL
InterPro ADF-H/Gelsolin-like_dom_sf UniProtKB/TrEMBL
  Gelsolin-like_dom UniProtKB/TrEMBL
  Gelsolin-like_dom_sf UniProtKB/TrEMBL
  Leu-rich_rpt UniProtKB/TrEMBL
  Leu-rich_rpt_4 UniProtKB/TrEMBL
  Leu-rich_rpt_typical-subtyp UniProtKB/TrEMBL
  LRR_dom_sf UniProtKB/TrEMBL
  Villin/Gelsolin UniProtKB/TrEMBL
NCBI Gene FLII ENTREZGENE
PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47-LIKE PROTEIN UniProtKB/TrEMBL
  PROTEIN FLIGHTLESS-1 HOMOLOG UniProtKB/TrEMBL
  PTHR11977 UniProtKB/TrEMBL
  PTHR48051 UniProtKB/TrEMBL
Pfam Gelsolin UniProtKB/TrEMBL
  LRR_4 UniProtKB/TrEMBL
  LRR_8 UniProtKB/TrEMBL
PRINTS GELSOLIN UniProtKB/TrEMBL
PROSITE LRR UniProtKB/TrEMBL
SMART GEL UniProtKB/TrEMBL
  LRR_BAC UniProtKB/TrEMBL
  LRR_SD22 UniProtKB/TrEMBL
  LRR_TYP UniProtKB/TrEMBL
Superfamily-SCOP Actin depolymerizing proteins UniProtKB/TrEMBL
  L domain-like UniProtKB/TrEMBL
  SSF82754 UniProtKB/TrEMBL
UniProt A0A286ZRM3_PIG UniProtKB/TrEMBL
  A0A287AT54 ENTREZGENE
  A0A287BPH8_PIG UniProtKB/TrEMBL
  A0A480HZP7 ENTREZGENE, UniProtKB/TrEMBL
  A0A480KP43 ENTREZGENE, UniProtKB/TrEMBL
  A0A480LBI0 ENTREZGENE, UniProtKB/TrEMBL
  A0A480Q526 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1SXB1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0W3X8_PIG UniProtKB/TrEMBL
  A0A8D0W585_PIG UniProtKB/TrEMBL
  A0A8D0W5Z0_PIG UniProtKB/TrEMBL
  A0A8D0W6J2_PIG UniProtKB/TrEMBL
  A0A8D1B547_PIG UniProtKB/TrEMBL
  A0A8D1BAD2_PIG UniProtKB/TrEMBL
  A0A8D1BAI0_PIG UniProtKB/TrEMBL
  A0A8D1D3C2_PIG UniProtKB/TrEMBL
  A0A8D1D3C6_PIG UniProtKB/TrEMBL
  A0A8D1D3D2_PIG UniProtKB/TrEMBL
  A0A8D1D3D8_PIG UniProtKB/TrEMBL
  A0A8D1EDY2_PIG UniProtKB/TrEMBL
  A0A8D1EEW9_PIG UniProtKB/TrEMBL
  A0A8D1GI36_PIG UniProtKB/TrEMBL
  A0A8D1GIH6_PIG UniProtKB/TrEMBL
  A0A8D1GII4_PIG UniProtKB/TrEMBL
  A0A8D1GMN1_PIG UniProtKB/TrEMBL
  A0A8D1GNR3_PIG UniProtKB/TrEMBL
  A0A8D1GPT6_PIG UniProtKB/TrEMBL
  A0A8D1KQ51_PIG UniProtKB/TrEMBL
  A0A8D1QNB9 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A0A287AT54 UniProtKB/TrEMBL
VGNC ID VGNC:88154 ENTREZGENE