LOC106508100 (zinc finger protein 791-like)

Gene: LOC106508100 (zinc finger protein 791-like) Sus scrofa

Analyze

No known orthologs.

Symbol:

LOC106508100

Name:

zinc finger protein 791-like

RGD ID:

14256323

Description:

ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription factor activity, RNA polymerase II-specific (inferred); metal ion binding (inferred); INVOLVED IN regulation of DNA-templated transcription (inferred); regulation of transcription by RNA polymerase II (inferred); FOUND IN nucleus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

zinc finger protein 136; ZNF136

RGD Orthologs

Alliance Genes

More Info

homologs ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	2	66,650,443 - 66,711,348 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	67,140,276 - 67,153,470 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

regulation of DNA-templated transcription (IEA)

regulation of transcription by RNA polymerase II (IEA)

Cellular Component

nucleus (IEA)

Molecular Function

DNA binding (IEA)

DNA-binding transcription factor activity, RNA polymerase II-specific (IEA)

metal ion binding (IEA)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IEA)

References

Additional References at PubMed

PMID:14681463	PMID:17145712	PMID:30032202

Genomics

Variants

Variants in LOC106508100
841 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium	8	2	3	5		12		3	3
Low	2	2			2	11	2
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_021083741	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021083742	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021083743	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021083744	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK349256	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBZA01000742	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XM_021083741 ⟹ XP_020939400

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	66,650,443 - 66,674,701 (-)	NCBI

Sequence:

show sequence

CCAACCGGGAAGCCGTTGAAGCAGGTGGGTGGGGCGACGCGCAGCATCAGCGAGGACTTCCTCC
TTTTCTCCCACCGCGTACAAGGTCGCCTCCCGTGTAGAGTTCTCTGGTTCTGGTTACTCTGCGA
TATCTTTGTTCCCCTGTGATCTGCACTGGTCGTTGGAGTCGTTAGGAGGTACTCAGACCCAGGA
AACGTAATGGCAAAGGAGACCACAGAAGGCTAAGACCCTAAAGACTATGCCCTCTCCTGGAGAA
GAGTTTTTTAGGACCATAAGGAGAAAAACGGGGTTCCAGGACTCAGTGACCATTGATGATGTGG
CTGTGAACTTCACCCTGGAGGAGTGGGCTTTATTGCATCCTTCACAGAGGAAACTCTACAGAGA
TGTGATGCAGGAAACCTTCAGGAACCTGTCTTTAATAGGAACCAAATGGAAAGATCATGACATT
GAAGATCAGTACAAAAACCCAGGGAGGAAATTAAGAAGTGCCATGGTAAAGAGACTTCCTGAAA
GTAAAGACAGTAGTTCATGTGGAAAAAACTTCAACCTTATTCCAACTCTCAATCTAAACCAAAA
AACTCCTGGATTGAAATCATGTAAATGCAGTACATGTGAAAAAGTCTTTATGGATCATTCATCC
CTTCATAAACATATGAGATGTCACACTGAACACAAACCACAAGAGTATCAAAAATGCAATGAGA
AGGTATCTAAATGTAAAGAATGTGGGAAAGCATTCATTTATCTCAGTTCTCTTAGAACACATGA
AAGCAGTCACACTGGAGAGAAACCCTATGAATGTAAACAGTGTGGAAAAGCCTTTCTATATCAA
AAAACCTTCCAGGCACACAGAAGAACTCACATAAGAGAAAAATCCTATGAATGCAGGCAATGTG
GTAAAAAATTCAGATCTCAAAACCGTTTCCAAATACATGAAAGTAGTCACACTGGAAAAAAACA
CTATGAATGTAAGGAGTGTGGGAAAGCCTTCACATGGCAAACAAGCTTTCAAAAACACATGGTA
ACACATACTGGAGATGGACTTCATAAATGTAAGCAATGTGAGAAAGCATTCGTTTATCCCAGTT
CTCTTAGAATACATGAAAGGAGTCACAATGGAGAGAAACCCTATCAGTGTAAACAATGTGGAAA
AGCCTTTAAATGTGCTAAAACTATTCGAATTCATGAAAGAATTCACAGAGGAGAGAAACCCTAT
GGATGTAAGCAGTGTGGAAAAGCCTTCACTTATTTTAGTTCTTTACAAATACACAAAAGACAGC
ACATGGGAAGAAAAACATATGCCTGTAAAACATGTTCTAAAGAATTGAGTACTCCCAGTTCTCT
TCGAAATCATGAAAGAATCCACACTGGAGAAAAACCCTATGAGTGTAAGGAATGTGGGAAAGCC
TATGCCTGGTATAATAACTTACAATATCACATGATAACACACACTAAAGATGGACCTTATAAAT
GCAAAGAATGTGAGAAAGTATTCATTAATCCCAGTTCTCTTAAAATACATGAAAGGAGTCACTC
TGAAGAGAATCCGTATCAGTGTAAAAAATGTGGTAAAAATTTAAGTTCTCAAAAAAGTTTCCGA
ATGCATGAAAGAACCCATACTGGAGAAAAGCCCTATAAATGTAAGATATGTGGGAAAACCTTCA
CTTCTACTTATGTTCATGTGCACGAAAGAATTCATACTGGACAGAAACCTTATCGATGTCATGA
ATGTGGGAAAGGCTTCATTTGTAGCTCAATCATTCGAAGACACATGAGAATGCACACTAGACAG
AAACAATATAAAATGTAGAGAATGTGAGAAACCCTATTCTGATCTTATTTGTTTACAAAAGGAT
GACAAGATTCACTAGATAAAACCTCTTGTCAGTATACAGCCTGGGAAACAATTCAGTGGGCTCA
CATCTTTACATATGAAAACTCCCACAAATGAAGAAATAAAAATGTAACATAACTAGTTGGAAAG
CAATCCATGCCTAATATTCCAGAAAACCTTCAATATGAAAGAGCTGTTTTAAAAGTTTATAAAT
ATGTTGTGTCTACTAAGGATATTTCTTGAAGTGTATCCTTGGATGGTGGATTTCTACTAATTTC
AGAAATGAACATTAATGTGAGATAGTCCTGTAAGTTGTCTTTCAACAGTAGTACATAAAGTTCA
GTAACTTTTTGTTTAATCAAGCGATGATGTAATTAGGCTTGAATTTTTATAATGTGCTCTTCAT
TCTCCATTAAAGGTTCATTGAAAATAGCAGTTTGGTATTTGTTGGGGTTTTCTTCTTGGTCTTG
GGTAGCAGTTCCTAGATATCTGTAATCTACTACATATATTGTACCTTTTTTTACTGAGAAAGAG
CCTTTTGGGGGGCATGGTATTTACAGAAGCCTTTTTCTGTGACTTTCTTGTTCAACACTTGGAA
TAAAGTTTTATATATGGCAAGG

hide sequence

RefSeq Acc Id:

XM_021083742 ⟹ XP_020939401

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	66,650,443 - 66,674,442 (-)	NCBI

Sequence:

show sequence

ACCGGTTTTCATTTGACCCGGCCTCCTCGTCACCGCTGGAGTCAGCGGATACGCGTGGGTCTGG
GGTGCGGCGCGGATCTCAGTCCGCTCCTGTTTGCAGTTGCGCGGCGGGGCTTGGCCGGGCAGCC
GGGACCCCGAGCGTCCTGTTGCGTCACTTCGCGCAGGAACTTCGGCCCCGGAACCTCTTTGGGC
AGCTCTACTGTCGCATCCCCTCTTCTAGCCTAGATTGTGCGGTGACAACCGGCACGGTTTTCAG
CTGACAGTTGTGACGCGCTCTCCAGGGTTTGGGCAAAGGAGACCACAGAAGGCTAAGACCCTAA
AGACTATGCCCTCTCCTGGAGAAGAGTTTTTTAGGACCATAAGGAGAAAAACGGGGTTCCAGGA
CTCAGTGACCATTGATGATGTGGCTGTGAACTTCACCCTGGAGGAGTGGGCTTTATTGCATCCT
TCACAGAGGAAACTCTACAGAGATGTGATGCAGGAAACCTTCAGGAACCTGTCTTTAATAGGAA
CCAAATGGAAAGATCATGACATTGAAGATCAGTACAAAAACCCAGGGAGGAAATTAAGAAGTGC
CATGGTAAAGAGACTTCCTGAAAGTAAAGACAGTAGTTCATGTGGAAAAAACTTCAACCTTATT
CCAACTCTCAATCTAAACCAAAAAACTCCTGGATTGAAATCATGTAAATGCAGTACATGTGAAA
AAGTCTTTATGGATCATTCATCCCTTCATAAACATATGAGATGTCACACTGAACACAAACCACA
AGAGTATCAAAAATGCAATGAGAAGGTATCTAAATGTAAAGAATGTGGGAAAGCATTCATTTAT
CTCAGTTCTCTTAGAACACATGAAAGCAGTCACACTGGAGAGAAACCCTATGAATGTAAACAGT
GTGGAAAAGCCTTTCTATATCAAAAAACCTTCCAGGCACACAGAAGAACTCACATAAGAGAAAA
ATCCTATGAATGCAGGCAATGTGGTAAAAAATTCAGATCTCAAAACCGTTTCCAAATACATGAA
AGTAGTCACACTGGAAAAAAACACTATGAATGTAAGGAGTGTGGGAAAGCCTTCACATGGCAAA
CAAGCTTTCAAAAACACATGGTAACACATACTGGAGATGGACTTCATAAATGTAAGCAATGTGA
GAAAGCATTCGTTTATCCCAGTTCTCTTAGAATACATGAAAGGAGTCACAATGGAGAGAAACCC
TATCAGTGTAAACAATGTGGAAAAGCCTTTAAATGTGCTAAAACTATTCGAATTCATGAAAGAA
TTCACAGAGGAGAGAAACCCTATGGATGTAAGCAGTGTGGAAAAGCCTTCACTTATTTTAGTTC
TTTACAAATACACAAAAGACAGCACATGGGAAGAAAAACATATGCCTGTAAAACATGTTCTAAA
GAATTGAGTACTCCCAGTTCTCTTCGAAATCATGAAAGAATCCACACTGGAGAAAAACCCTATG
AGTGTAAGGAATGTGGGAAAGCCTATGCCTGGTATAATAACTTACAATATCACATGATAACACA
CACTAAAGATGGACCTTATAAATGCAAAGAATGTGAGAAAGTATTCATTAATCCCAGTTCTCTT
AAAATACATGAAAGGAGTCACTCTGAAGAGAATCCGTATCAGTGTAAAAAATGTGGTAAAAATT
TAAGTTCTCAAAAAAGTTTCCGAATGCATGAAAGAACCCATACTGGAGAAAAGCCCTATAAATG
TAAGATATGTGGGAAAACCTTCACTTCTACTTATGTTCATGTGCACGAAAGAATTCATACTGGA
CAGAAACCTTATCGATGTCATGAATGTGGGAAAGGCTTCATTTGTAGCTCAATCATTCGAAGAC
ACATGAGAATGCACACTAGACAGAAACAATATAAAATGTAGAGAATGTGAGAAACCCTATTCTG
ATCTTATTTGTTTACAAAAGGATGACAAGATTCACTAGATAAAACCTCTTGTCAGTATACAGCC
TGGGAAACAATTCAGTGGGCTCACATCTTTACATATGAAAACTCCCACAAATGAAGAAATAAAA
ATGTAACATAACTAGTTGGAAAGCAATCCATGCCTAATATTCCAGAAAACCTTCAATATGAAAG
AGCTGTTTTAAAAGTTTATAAATATGTTGTGTCTACTAAGGATATTTCTTGAAGTGTATCCTTG
GATGGTGGATTTCTACTAATTTCAGAAATGAACATTAATGTGAGATAGTCCTGTAAGTTGTCTT
TCAACAGTAGTACATAAAGTTCAGTAACTTTTTGTTTAATCAAGCGATGATGTAATTAGGCTTG
AATTTTTATAATGTGCTCTTCATTCTCCATTAAAGGTTCATTGAAAATAGCAGTTTGGTATTTG
TTGGGGTTTTCTTCTTGGTCTTGGGTAGCAGTTCCTAGATATCTGTAATCTACTACATATATTG
TACCTTTTTTTACTGAGAAAGAGCCTTTTGGGGGGCATGGTATTTACAGAAGCCTTTTTCTGTG
ACTTTCTTGTTCAACACTTGGAATAAAGTTTTATATATGGCAAGG

hide sequence

RefSeq Acc Id:

XM_021083743 ⟹ XP_020939402

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	66,650,443 - 66,674,699 (-)	NCBI

Sequence:

show sequence

AACCGGGAAGCCGTTGAAGCAGGTGGGTGGGGCGACGCGCAGCATCAGCGAGGACTTCCTCCTT
TTCTCCCACCGCGTACAAGGTCGCCTCCCGTGTAGAGTTCTCTGGTTCTGGTTACTCTGCGATA
TCTTTGTTCCCCTGTGATCTGCACTGGTCGTTGGAGTCGTTAGGAGGTACTCAGACCCAGGAAA
CGTAATGGACTCAGTGACCATTGATGATGTGGCTGTGAACTTCACCCTGGAGGAGTGGGCTTTA
TTGCATCCTTCACAGAGGAAACTCTACAGAGATGTGATGCAGGAAACCTTCAGGAACCTGTCTT
TAATAGGAACCAAATGGAAAGATCATGACATTGAAGATCAGTACAAAAACCCAGGGAGGAAATT
AAGAAGTGCCATGGTAAAGAGACTTCCTGAAAGTAAAGACAGTAGTTCATGTGGAAAAAACTTC
AACCTTATTCCAACTCTCAATCTAAACCAAAAAACTCCTGGATTGAAATCATGTAAATGCAGTA
CATGTGAAAAAGTCTTTATGGATCATTCATCCCTTCATAAACATATGAGATGTCACACTGAACA
CAAACCACAAGAGTATCAAAAATGCAATGAGAAGGTATCTAAATGTAAAGAATGTGGGAAAGCA
TTCATTTATCTCAGTTCTCTTAGAACACATGAAAGCAGTCACACTGGAGAGAAACCCTATGAAT
GTAAACAGTGTGGAAAAGCCTTTCTATATCAAAAAACCTTCCAGGCACACAGAAGAACTCACAT
AAGAGAAAAATCCTATGAATGCAGGCAATGTGGTAAAAAATTCAGATCTCAAAACCGTTTCCAA
ATACATGAAAGTAGTCACACTGGAAAAAAACACTATGAATGTAAGGAGTGTGGGAAAGCCTTCA
CATGGCAAACAAGCTTTCAAAAACACATGGTAACACATACTGGAGATGGACTTCATAAATGTAA
GCAATGTGAGAAAGCATTCGTTTATCCCAGTTCTCTTAGAATACATGAAAGGAGTCACAATGGA
GAGAAACCCTATCAGTGTAAACAATGTGGAAAAGCCTTTAAATGTGCTAAAACTATTCGAATTC
ATGAAAGAATTCACAGAGGAGAGAAACCCTATGGATGTAAGCAGTGTGGAAAAGCCTTCACTTA
TTTTAGTTCTTTACAAATACACAAAAGACAGCACATGGGAAGAAAAACATATGCCTGTAAAACA
TGTTCTAAAGAATTGAGTACTCCCAGTTCTCTTCGAAATCATGAAAGAATCCACACTGGAGAAA
AACCCTATGAGTGTAAGGAATGTGGGAAAGCCTATGCCTGGTATAATAACTTACAATATCACAT
GATAACACACACTAAAGATGGACCTTATAAATGCAAAGAATGTGAGAAAGTATTCATTAATCCC
AGTTCTCTTAAAATACATGAAAGGAGTCACTCTGAAGAGAATCCGTATCAGTGTAAAAAATGTG
GTAAAAATTTAAGTTCTCAAAAAAGTTTCCGAATGCATGAAAGAACCCATACTGGAGAAAAGCC
CTATAAATGTAAGATATGTGGGAAAACCTTCACTTCTACTTATGTTCATGTGCACGAAAGAATT
CATACTGGACAGAAACCTTATCGATGTCATGAATGTGGGAAAGGCTTCATTTGTAGCTCAATCA
TTCGAAGACACATGAGAATGCACACTAGACAGAAACAATATAAAATGTAGAGAATGTGAGAAAC
CCTATTCTGATCTTATTTGTTTACAAAAGGATGACAAGATTCACTAGATAAAACCTCTTGTCAG
TATACAGCCTGGGAAACAATTCAGTGGGCTCACATCTTTACATATGAAAACTCCCACAAATGAA
GAAATAAAAATGTAACATAACTAGTTGGAAAGCAATCCATGCCTAATATTCCAGAAAACCTTCA
ATATGAAAGAGCTGTTTTAAAAGTTTATAAATATGTTGTGTCTACTAAGGATATTTCTTGAAGT
GTATCCTTGGATGGTGGATTTCTACTAATTTCAGAAATGAACATTAATGTGAGATAGTCCTGTA
AGTTGTCTTTCAACAGTAGTACATAAAGTTCAGTAACTTTTTGTTTAATCAAGCGATGATGTAA
TTAGGCTTGAATTTTTATAATGTGCTCTTCATTCTCCATTAAAGGTTCATTGAAAATAGCAGTT
TGGTATTTGTTGGGGTTTTCTTCTTGGTCTTGGGTAGCAGTTCCTAGATATCTGTAATCTACTA
CATATATTGTACCTTTTTTTACTGAGAAAGAGCCTTTTGGGGGGCATGGTATTTACAGAAGCCT
TTTTCTGTGACTTTCTTGTTCAACACTTGGAATAAAGTTTTATATATGGCAAGG

hide sequence

RefSeq Acc Id:

XM_021083744 ⟹ XP_020939403

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	66,650,443 - 66,711,348 (-)	NCBI

Sequence:

show sequence

CGGTCGCCGCGCACGGAGTGGACGCGCCCTTTTTCCATCCCACCGCTCAGGTGCGCGTTGCTTA
TCCTTAATGGTCTCTGGTTGCTTGTTAGCCTCTTTTGTCCTGCCTTGACCTGCCCTGGTCGTTG
GAGTAGAGGGAAGGACGCAGAACCCGAGGAAACCTCGCGATGTGTTTCGGACTCAGTGACCATT
GAAGATGTGGTCGTGAACTTCACCCTGGAGGAATGGGCTTTACTGCATCTTTCACAGAGGAAAC
TACAGAGATGTGCTGCAGGAAACCTTCAGGAACCTGGCCTCAATAGGACTCAGTGACCATTGAT
GATGTGGCTGTGAACTTCACCCTGGAGGAGTGGGCTTTATTGCATCCTTCACAGAGGAAACTCT
ACAGAGATGTGATGCAGGAAACCTTCAGGAACCTGTCTTTAATAGGAACCAAATGGAAAGATCA
TGACATTGAAGATCAGTACAAAAACCCAGGGAGGAAATTAAGAAGTGCCATGGTAAAGAGACTT
CCTGAAAGTAAAGACAGTAGTTCATGTGGAAAAAACTTCAACCTTATTCCAACTCTCAATCTAA
ACCAAAAAACTCCTGGATTGAAATCATGTAAATGCAGTACATGTGAAAAAGTCTTTATGGATCA
TTCATCCCTTCATAAACATATGAGATGTCACACTGAACACAAACCACAAGAGTATCAAAAATGC
AATGAGAAGGTATCTAAATGTAAAGAATGTGGGAAAGCATTCATTTATCTCAGTTCTCTTAGAA
CACATGAAAGCAGTCACACTGGAGAGAAACCCTATGAATGTAAACAGTGTGGAAAAGCCTTTCT
ATATCAAAAAACCTTCCAGGCACACAGAAGAACTCACATAAGAGAAAAATCCTATGAATGCAGG
CAATGTGGTAAAAAATTCAGATCTCAAAACCGTTTCCAAATACATGAAAGTAGTCACACTGGAA
AAAAACACTATGAATGTAAGGAGTGTGGGAAAGCCTTCACATGGCAAACAAGCTTTCAAAAACA
CATGGTAACACATACTGGAGATGGACTTCATAAATGTAAGCAATGTGAGAAAGCATTCGTTTAT
CCCAGTTCTCTTAGAATACATGAAAGGAGTCACAATGGAGAGAAACCCTATCAGTGTAAACAAT
GTGGAAAAGCCTTTAAATGTGCTAAAACTATTCGAATTCATGAAAGAATTCACAGAGGAGAGAA
ACCCTATGGATGTAAGCAGTGTGGAAAAGCCTTCACTTATTTTAGTTCTTTACAAATACACAAA
AGACAGCACATGGGAAGAAAAACATATGCCTGTAAAACATGTTCTAAAGAATTGAGTACTCCCA
GTTCTCTTCGAAATCATGAAAGAATCCACACTGGAGAAAAACCCTATGAGTGTAAGGAATGTGG
GAAAGCCTATGCCTGGTATAATAACTTACAATATCACATGATAACACACACTAAAGATGGACCT
TATAAATGCAAAGAATGTGAGAAAGTATTCATTAATCCCAGTTCTCTTAAAATACATGAAAGGA
GTCACTCTGAAGAGAATCCGTATCAGTGTAAAAAATGTGGTAAAAATTTAAGTTCTCAAAAAAG
TTTCCGAATGCATGAAAGAACCCATACTGGAGAAAAGCCCTATAAATGTAAGATATGTGGGAAA
ACCTTCACTTCTACTTATGTTCATGTGCACGAAAGAATTCATACTGGACAGAAACCTTATCGAT
GTCATGAATGTGGGAAAGGCTTCATTTGTAGCTCAATCATTCGAAGACACATGAGAATGCACAC
TAGACAGAAACAATATAAAATGTAGAGAATGTGAGAAACCCTATTCTGATCTTATTTGTTTACA
AAAGGATGACAAGATTCACTAGATAAAACCTCTTGTCAGTATACAGCCTGGGAAACAATTCAGT
GGGCTCACATCTTTACATATGAAAACTCCCACAAATGAAGAAATAAAAATGTAACATAACTAGT
TGGAAAGCAATCCATGCCTAATATTCCAGAAAACCTTCAATATGAAAGAGCTGTTTTAAAAGTT
TATAAATATGTTGTGTCTACTAAGGATATTTCTTGAAGTGTATCCTTGGATGGTGGATTTCTAC
TAATTTCAGAAATGAACATTAATGTGAGATAGTCCTGTAAGTTGTCTTTCAACAGTAGTACATA
AAGTTCAGTAACTTTTTGTTTAATCAAGCGATGATGTAATTAGGCTTGAATTTTTATAATGTGC
TCTTCATTCTCCATTAAAGGTTCATTGAAAATAGCAGTTTGGTATTTGTTGGGGTTTTCTTCTT
GGTCTTGGGTAGCAGTTCCTAGATATCTGTAATCTACTACATATATTGTACCTTTTTTTACTGA
GAAAGAGCCTTTTGGGGGGCATGGTATTTACAGAAGCCTTTTTCTGTGACTTTCTTGTTCAACA
CTTGGAATAAAGTTTTATATATGGCAAGG

hide sequence

Protein Sequences


Protein RefSeqs	XP_020939400	(Get FASTA)	NCBI Sequence Viewer
	XP_020939401	(Get FASTA)	NCBI Sequence Viewer
	XP_020939402	(Get FASTA)	NCBI Sequence Viewer
	XP_020939403	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000032683
	ENSSSCP00000032683.2
	ENSSSCP00005036359.1
	ENSSSCP00005036380.1
	ENSSSCP00025040174.1
	ENSSSCP00025040208.1
	ENSSSCP00030004222.1
	ENSSSCP00030004225.1
	ENSSSCP00035045962.1
	ENSSSCP00035045974.1
	ENSSSCP00040009146.1
	ENSSSCP00040009148.1
	ENSSSCP00045025113.1
	ENSSSCP00045025150.1
	ENSSSCP00050030359.1
	ENSSSCP00050030361.1
	ENSSSCP00055041945.1
	ENSSSCP00055041965.1
	ENSSSCP00060014044.1
	ENSSSCP00060014046.1
	ENSSSCP00065019842.1
	ENSSSCP00065019843.1
GenBank Protein	JAG69026	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_020939403 ⟸ XM_021083744

- Peptide Label:

isoform X3

- Sequence:

show sequence

MQETFRNLSLIGTKWKDHDIEDQYKNPGRKLRSAMVKRLPESKDSSSCGKNFNLIPTLNLNQKT
PGLKSCKCSTCEKVFMDHSSLHKHMRCHTEHKPQEYQKCNEKVSKCKECGKAFIYLSSLRTHES
SHTGEKPYECKQCGKAFLYQKTFQAHRRTHIREKSYECRQCGKKFRSQNRFQIHESSHTGKKHY
ECKECGKAFTWQTSFQKHMVTHTGDGLHKCKQCEKAFVYPSSLRIHERSHNGEKPYQCKQCGKA
FKCAKTIRIHERIHRGEKPYGCKQCGKAFTYFSSLQIHKRQHMGRKTYACKTCSKELSTPSSLR
NHERIHTGEKPYECKECGKAYAWYNNLQYHMITHTKDGPYKCKECEKVFINPSSLKIHERSHSE
ENPYQCKKCGKNLSSQKSFRMHERTHTGEKPYKCKICGKTFTSTYVHVHERIHTGQKPYRCHEC
GKGFICSSIIRRHMRMHTRQKQYKM

hide sequence

RefSeq Acc Id:	XP_020939400 ⟸ XM_021083741
- Peptide Label:	isoform X1
- UniProtKB:	A0A8D1DLW1 (UniProtKB/TrEMBL), A0A8D1HXA4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPSPGEEFFRTIRRKTGFQDSVTIDDVAVNFTLEEWALLHPSQRKLYRDVMQETFRNLSLIGTK WKDHDIEDQYKNPGRKLRSAMVKRLPESKDSSSCGKNFNLIPTLNLNQKTPGLKSCKCSTCEKV FMDHSSLHKHMRCHTEHKPQEYQKCNEKVSKCKECGKAFIYLSSLRTHESSHTGEKPYECKQCG KAFLYQKTFQAHRRTHIREKSYECRQCGKKFRSQNRFQIHESSHTGKKHYECKECGKAFTWQTS FQKHMVTHTGDGLHKCKQCEKAFVYPSSLRIHERSHNGEKPYQCKQCGKAFKCAKTIRIHERIH RGEKPYGCKQCGKAFTYFSSLQIHKRQHMGRKTYACKTCSKELSTPSSLRNHERIHTGEKPYEC KECGKAYAWYNNLQYHMITHTKDGPYKCKECEKVFINPSSLKIHERSHSEENPYQCKKCGKNLS SQKSFRMHERTHTGEKPYKCKICGKTFTSTYVHVHERIHTGQKPYRCHECGKGFICSSIIRRHM RMHTRQKQYKM hide sequence

RefSeq Acc Id:	XP_020939402 ⟸ XM_021083743
- Peptide Label:	isoform X2
- UniProtKB:	A0A286ZM93 (UniProtKB/TrEMBL), A0A8D0VCY2 (UniProtKB/TrEMBL), A0A0B8RVC6 (UniProtKB/TrEMBL), A0A8D1DMW9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDSVTIDDVAVNFTLEEWALLHPSQRKLYRDVMQETFRNLSLIGTKWKDHDIEDQYKNPGRKLR SAMVKRLPESKDSSSCGKNFNLIPTLNLNQKTPGLKSCKCSTCEKVFMDHSSLHKHMRCHTEHK PQEYQKCNEKVSKCKECGKAFIYLSSLRTHESSHTGEKPYECKQCGKAFLYQKTFQAHRRTHIR EKSYECRQCGKKFRSQNRFQIHESSHTGKKHYECKECGKAFTWQTSFQKHMVTHTGDGLHKCKQ CEKAFVYPSSLRIHERSHNGEKPYQCKQCGKAFKCAKTIRIHERIHRGEKPYGCKQCGKAFTYF SSLQIHKRQHMGRKTYACKTCSKELSTPSSLRNHERIHTGEKPYECKECGKAYAWYNNLQYHMI THTKDGPYKCKECEKVFINPSSLKIHERSHSEENPYQCKKCGKNLSSQKSFRMHERTHTGEKPY KCKICGKTFTSTYVHVHERIHTGQKPYRCHECGKGFICSSIIRRHMRMHTRQKQYKM hide sequence

RefSeq Acc Id:	XP_020939401 ⟸ XM_021083742
- Peptide Label:	isoform X1
- UniProtKB:	A0A8D1DLW1 (UniProtKB/TrEMBL), A0A8D1HXA4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPSPGEEFFRTIRRKTGFQDSVTIDDVAVNFTLEEWALLHPSQRKLYRDVMQETFRNLSLIGTK WKDHDIEDQYKNPGRKLRSAMVKRLPESKDSSSCGKNFNLIPTLNLNQKTPGLKSCKCSTCEKV FMDHSSLHKHMRCHTEHKPQEYQKCNEKVSKCKECGKAFIYLSSLRTHESSHTGEKPYECKQCG KAFLYQKTFQAHRRTHIREKSYECRQCGKKFRSQNRFQIHESSHTGKKHYECKECGKAFTWQTS FQKHMVTHTGDGLHKCKQCEKAFVYPSSLRIHERSHNGEKPYQCKQCGKAFKCAKTIRIHERIH RGEKPYGCKQCGKAFTYFSSLQIHKRQHMGRKTYACKTCSKELSTPSSLRNHERIHTGEKPYEC KECGKAYAWYNNLQYHMITHTKDGPYKCKECEKVFINPSSLKIHERSHSEENPYQCKKCGKNLS SQKSFRMHERTHTGEKPYKCKICGKTFTSTYVHVHERIHTGQKPYRCHECGKGFICSSIIRRHM RMHTRQKQYKM hide sequence

Protein Domains

C2H2-type KRAB

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000040187	ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00005036898	UniProtKB/TrEMBL
	ENSSSCG00025066652	UniProtKB/TrEMBL
	ENSSSCG00030007389	UniProtKB/TrEMBL
	ENSSSCG00035078182	UniProtKB/TrEMBL
	ENSSSCG00040016299	UniProtKB/TrEMBL
	ENSSSCG00045021166	UniProtKB/TrEMBL
	ENSSSCG00050051857	UniProtKB/TrEMBL
	ENSSSCG00055026591	UniProtKB/TrEMBL
	ENSSSCG00060024141	UniProtKB/TrEMBL
	ENSSSCG00065033946	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000051100	ENTREZGENE
	ENSSSCT00000051100.2	UniProtKB/TrEMBL
	ENSSSCT00005058883.1	UniProtKB/TrEMBL
	ENSSSCT00005058922.1	UniProtKB/TrEMBL
	ENSSSCT00025091525.1	UniProtKB/TrEMBL
	ENSSSCT00025091600.1	UniProtKB/TrEMBL
	ENSSSCT00030009898.1	UniProtKB/TrEMBL
	ENSSSCT00030009903.1	UniProtKB/TrEMBL
	ENSSSCT00035106626.1	UniProtKB/TrEMBL
	ENSSSCT00035106644.1	UniProtKB/TrEMBL
	ENSSSCT00040021897.1	UniProtKB/TrEMBL
	ENSSSCT00040021903.1	UniProtKB/TrEMBL
	ENSSSCT00045036112.1	UniProtKB/TrEMBL
	ENSSSCT00045036161.1	UniProtKB/TrEMBL
	ENSSSCT00050070622.1	UniProtKB/TrEMBL
	ENSSSCT00050070627.1	UniProtKB/TrEMBL
	ENSSSCT00055052529.1	UniProtKB/TrEMBL
	ENSSSCT00055052563.1	UniProtKB/TrEMBL
	ENSSSCT00060032740.1	UniProtKB/TrEMBL
	ENSSSCT00060032743.1	UniProtKB/TrEMBL
	ENSSSCT00065046196.1	UniProtKB/TrEMBL
	ENSSSCT00065046202.1	UniProtKB/TrEMBL
Gene3D-CATH	6.10.140.140	UniProtKB/TrEMBL
	Classic Zinc Finger	UniProtKB/TrEMBL
InterPro	KRAB	UniProtKB/TrEMBL
	KRAB_dom_sf	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/TrEMBL
	Znf_C2H2_type	UniProtKB/TrEMBL
NCBI Gene	LOC106508100	ENTREZGENE
PANTHER	RCG31665-RELATED	UniProtKB/TrEMBL
	ZINC FINGER AND SCAN DOMAIN-CONTAINING	UniProtKB/TrEMBL
Pfam	KRAB	UniProtKB/TrEMBL
	zf-C2H2	UniProtKB/TrEMBL
	zf-C2H2_6	UniProtKB/TrEMBL
PROSITE	KRAB	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
SMART	KRAB	UniProtKB/TrEMBL
	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF109640	UniProtKB/TrEMBL
	SSF57667	UniProtKB/TrEMBL
UniProt	A0A0B8RVC6	ENTREZGENE
	A0A286ZM93	ENTREZGENE
	A0A8D0VCY2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1DLW1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1DMW9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1HXA4	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	A0A286ZM93	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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