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Gene: CNTN2 (contactin 2) Sus scrofa

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Symbol:

CNTN2

Name:

contactin 2

RGD ID:

14255395

Description:

ENCODES a protein that exhibits carbohydrate binding (inferred); cell adhesion mediator activity (inferred); INVOLVED IN axonogenesis (ortholog); cell-matrix adhesion (ortholog); protein localization to juxtaparanode region of axon (ortholog); ASSOCIATED WITH autistic disorder (ortholog); familial adult myoclonic epilepsy 5 (ortholog); gastrointestinal stromal tumor (ortholog); FOUND IN synapse (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

contactin 2 (axonal); contactin-2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CNTN2 (contactin 2)	HGNC	Ensembl, NCBI, OrthoDB
Mus musculus (house mouse):	Cntn2 (contactin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Cntn2 (contactin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Cntn2 (contactin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CNTN2 (contactin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CNTN2 (contactin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Cntn2 (contactin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CNTN2 (contactin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Cntn2 (contactin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	65,736,740 - 65,776,396 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	65,737,488 - 65,776,412 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

familial adult myoclonic epilepsy 5 (ISO)

gastrointestinal stromal tumor (ISO)

high grade glioma (ISO)

Hypokalemic Periodic Paralysis, Type 1 (ISO)

lung disease (ISO)

parathyroid carcinoma (ISO)

T-cell adult acute lymphocytic leukemia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

adult walking behavior (IEA)

axon guidance (IEA)

axonal fasciculation (IEA)

axonogenesis (ISO)

cell adhesion (IEA)

cell-matrix adhesion (ISO)

central nervous system myelination (IEA)

central nervous system neuron differentiation (IEA)

cerebral cortex GABAergic interneuron migration (IEA)

clustering of voltage-gated potassium channels (IEA)

establishment of localization in cell (IEA)

establishment of protein localization to juxtaparanode region of axon (IEA)

fat cell differentiation (IEA)

G protein-coupled adenosine receptor signaling pathway (IEA)

learning (IEA)

microtubule cytoskeleton organization (IEA)

negative regulation of neuron differentiation (IEA)

neuron migration (IEA)

neuron projection development (IEA)

positive regulation of adenosine receptor signaling pathway (IEA)

positive regulation of protein processing (IEA)

presynaptic membrane organization (IEA)

protein localization to juxtaparanode region of axon (IEA,ISO)

protein processing (IEA)

receptor internalization (IEA)

reduction of food intake in response to dietary excess (IEA)

regulation of astrocyte differentiation (IEA)

regulation of axon diameter (IEA)

regulation of cell morphogenesis (IEA)

regulation of neuronal synaptic plasticity (IEA)

response to dietary excess (IEA)

Cellular Component

axon (IEA)

axon initial segment (IEA)

cell surface (IEA)

juxtaparanode region of axon (IEA)

myelin sheath (IEA)

neuron projection (IEA)

neuronal cell body (IEA)

node of Ranvier (IEA)

plasma membrane (IEA)

postsynaptic membrane (IEA)

side of membrane (IEA)

synapse (ISO)

Molecular Function

carbohydrate binding (IEA)

cell adhesion mediator activity (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

CNTN2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	65,736,740 - 65,776,396 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	65,737,488 - 65,776,412 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

CNTN2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	205,042,949 - 205,078,289 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	205,042,937 - 205,078,289 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	205,012,077 - 205,047,417 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	203,278,963 - 203,313,761 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	201,743,996 - 201,778,793	NCBI
Celera	1	178,147,407 - 178,182,200 (+)	NCBI		Celera
Cytogenetic Map	1	q32.1	NCBI
HuRef	1	176,177,847 - 176,212,673 (+)	NCBI		HuRef
CHM1_1	1	206,435,687 - 206,470,502 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	204,307,317 - 204,342,659 (+)	NCBI		T2T-CHM13v2.0

Cntn2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	132,437,163 - 132,470,989 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	132,437,165 - 132,470,994 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	132,509,425 - 132,543,251 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	132,509,427 - 132,543,256 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	134,406,002 - 134,439,517 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	134,336,973 - 134,370,462 (-)	NCBI		MGSCv36	mm8
Celera	1	135,118,092 - 135,152,003 (-)	NCBI		Celera
Cytogenetic Map	1	E4	NCBI
cM Map	1	57.42	NCBI

Cntn2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	46,497,269 - 46,528,112 (-)	NCBI		GRCr8
mRatBN7.2	13	43,942,868 - 43,975,973 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	43,947,265 - 43,975,887 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	46,554,249 - 46,582,887 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	47,842,379 - 47,871,008 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	45,103,086 - 45,131,717 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	49,280,913 - 49,314,061 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	49,285,310 - 49,313,940 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	54,356,315 - 54,389,667 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	45,399,915 - 45,428,789 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	13	45,413,957 - 45,442,832 (-)	NCBI
Celera	13	44,281,845 - 44,310,387 (-)	NCBI		Celera
Cytogenetic Map	13	q13	NCBI

Cntn2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955406	40,831,850 - 40,858,569 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955406	40,831,897 - 40,862,445 (+)	NCBI	ChiLan1.0	ChiLan1.0

CNTN2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	44,298,727 - 44,333,562 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	44,264,002 - 44,298,806 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	180,645,259 - 180,680,081 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	184,931,902 - 184,966,482 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	184,931,497 - 184,966,482 (+)	Ensembl	panpan1.1		panPan2

CNTN2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	38	1,570,598 - 1,600,524 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	38	1,576,898 - 1,596,621 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	38	1,661,917 - 1,694,727 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	38	1,564,191 - 1,597,016 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	38	1,563,948 - 1,596,983 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	38	1,560,461 - 1,593,270 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	38	1,951,695 - 1,980,625 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	38	2,151,770 - 2,184,597 (+)	NCBI		UU_Cfam_GSD_1.0

Cntn2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	70,057,146 - 70,080,384 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936557	7,297,422 - 7,320,846 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936557	7,297,429 - 7,320,666 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CNTN2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	24,262,092 - 24,296,740 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	25	24,261,651 - 24,296,850 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666055	25,018,404 - 25,053,686 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cntn2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624807	6,056,339 - 6,073,588 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624807	6,052,591 - 6,080,421 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in CNTN2
1196 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
8	3	23	3	5	9	9	23	3	4	1

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_021063272	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000070	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000045904 ⟹ ENSSSCP00000055015

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	9	65,736,740 - 65,776,396 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000064707 ⟹ ENSSSCP00000040514

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	9	65,737,719 - 65,776,308 (+)	Ensembl

RefSeq Acc Id:

XM_021063272 ⟹ XP_020918931

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	9	65,737,488 - 65,776,412 (+)	NCBI

Sequence:

show sequence

GCCTTGGCGGAGGACCGGAGCCAGCCAGTGAGCGGAGCCTGGAAGAGGGAGGAGCACATCTTGA
TGCAGAGATGCTGCAGTGGCTCCGCCGCGCACGAGCACGAGCGCCCGCGCGCGCGCGTGCACAC
ACACACACACACACACGCATACGCGCACACACACACACACATACACACACGCCCTCAGCCGCCA
CCGGGCCGCTGCACCAGGACAGCAGCGAGCGGCTGAGGCCAGCAAGAAGAGGAGGAGAGCGGCC
CAGGGGGCTGGCGGCCGGGCTGGCTCCGGCTCCGCCCTCGAGCAGCATCCACTTGCCCCAGCCA
ACACCCTTCCTTCACCCCAGGTCCTTCGCAGCCTCCAGCCAGACTCTGCCTGGGCTGGGCTGAG
GCTCTGCTCCTCTGCTCTCCCCTCTGCCTGGAACACCCACCATGGGGACTGCCCGCAGGAGGAA
ATCACACTTGCTACTGCTGGTCGCTGTGGTCCTCGTCTCCGCTCCGGCTTGGAGCTCAGCCCGG
GGTTCCCAAGCCACCTTTGGGCCTGTCTTTGAAGACCAGCCCCTCGGTCTGCTATTCCCAGAGG
AGTCCACAGAGGAGAAGGTGACCCTGGCTTGCCGGGCCCGGGCCAGCCCTCCGGCCACCTATAG
GTGGAAGATGAATGGCACCGAGATGAAGCTGGAGCCAGGCTCCCGCCACCAGCTAGTCGGGGGC
AACCTGGTCATCATGAACCCCACGAAGGCCCAGGACGCCGGCGTCTACCAGTGCCTGGCCTCCA
ACCCAGTGGGCACCGTCGTGAGCAGGGAGGCTGTCCTCCGCTTCGGCTTTCTGCAGGAATTCTC
CAAGGAGGAGCGAGACCCCGTGAAAACCCACGAAGGTTGGGGGGTGATGTTGCCTTGTAACCCG
CCGGCCCACTACCCAGGCTTGTCCTACCGCTGGCTCCTCAACGAATTCCCTAACTTCATCCCGA
CGGACGGGCGTCACTTCGTGTCCCAGACCACAGGGAACCTGTACATCGCCCGGACCAACGCCTC
AGACCTGGGCAACTACTCCTGCCTGGCCACCAGCCACATGGACTTCTCCACTAAGAGTGTCTTC
AGCAAGTTTGCTCAGCTCAACCTGGCTGCGGAAGACACCAGGCTCTTTGCCCCCAGCATCAAGG
CCAAGTTCCCCGCAGAGACCTATGCGCTGGTGGGGCAGCAGGTCACCTTGGAGTGCTTTGCCTT
CGGGAACCCCGTCCCCAGAATCAAGTGGCGCAAAGTGGATGGCTCCTTGTCCCCGCAGTGGGCC
ACAGCCGAGCCCACCCTGCAGATCCCCAGCGTAGGCTTCGAGGACGAGGGCACCTACGAGTGTG
AGGCGGAGAACTCCAAGGGCCGCGACACCGTCCAGGGCCGCATCATCGTGCAGGCTCAGCCGGA
GTGGCTCAAGGTGATCTCAGACATGGAGGCTGACATCGGTTCCAACCTGCATTGGGGTTGCGCA
GCCGCAGGCAAGCCCCGGCCCACAGTGCGCTGGCTGCGGAACGGGGAGCCTCTGGCCTCCCAGG
CCCGGGTAGAAGTGATGGCTGGGGACCTGCGCTTCTCCAAGCTGAGCCTGGAGGACTCGGGCAT
GTACCAGTGTGTGGCAGAGAACAAGCACGGCACCATCTACGCCAGTGCTGAGCTGGCCGTGCAA
GCACTTGCCCCCGACTTTAGGCTGAATCCTGTCAGACGGCTGATCCCTGCAGCCCGAGGGGGAG
AGATCATTATCCCCTGTCAGCCCCGGGCAGCTCCAAAGGCCGTGGTGCTCTGGAGCAAAGGCAC
TGAGATTTTGGTCAACAGCAGCAGAGTGACTGTAACTCCAGATGGCACCTTGATCATAAGAAAC
ATCAGTCGGTCAGATGAAGGCAAATATACCTGCTTTGCTGAGAATTTCATGGGCAAGGCCAACA
GCACGGGCATCCTGTCTGTGCGAGATGCAACCAAGATCACTCTAGCCCCCTCCAGTGCCGACAT
CAACTTGGGAGACAACCTGACCCTGCAGTGCCACGCCTCCCACGACCCCACCATGGACCTCACC
TTCATCTGGATGCTGGACGACTTTCCCATCGACTTCGACAAGCCTGGGGGTCACTACCGAAGGG
CCAGTGTGAAGGAGACGGTCGGGGATCTGAGCATCCTGAACGCCCAGCTGCGCCACGGCGGGAA
GTACACGTGCATGGCCCAGACGGTGGTGGACAGTGCGTCCAAGGAGGCCACAGTCCTGGTCCGA
GGTCCACCAGGTCCCCCAGGAGGTGTGGTGGTGAGAGAAATCGGTGACACCACTGTCCAGCTCA
GCTGGAGCCGTGGCTTTGACAACCACAGTCCCATTGCCAAGTACACCCTGCAAGCTCGCACTCT
ACCGGGGAAGTGGAAGCAGGTTCGGACCAATCCTGCCAACATCGAGGGCAACGCCGAGACCGCC
CAGGTGCTGGGCCTCACGCCCTGGATGGACTATGAGTTCCGAGTTGTAGCCAGCAACATCCTGG
GCACTGGGGAGCCCAGTGGGCCCTCCAGCAAAATCCGGACCAAGGAAGCAGCCCCCTCGGTGGC
ACCCTCAGGTCTCAGCGGAGGTGGTGGAGCCCCCGGAGAGCTCATCGTCAACTGGACGCCCATG
TCCCGGGAGTACCAGAACGGAGACGGCTTCGGCTACCTGCTGTCCTTCCGCAGGCAGGGCAGCA
CTAGCTGGCAGACCGCGCGGGTGCCCGGCGCCGACGCCCAGTACTTCGTCTACAGCAACGAGAG
CGTCCGGCCCTACACGCCCTTTGAGGTCAAGATCCGCAGCTACAACCGCCGCGGGGAGGGGCCC
GAGAGCCTCACGGCCCTCGTGTACTCGGCGGAGGAAGAGCCCAGGGTGGCCCCAACCAAGGTCT
GGGCCCAGGGGGTCGCATCCTCAGAGATGAACGTGACCTGGGAACCTGTACAGCAGGACATGAA
TGGGATCCTCCTGGGGTACGAGATCCGCTACTGGAAAGCTGGGGACAAAGAAGCAGCCGCTGAC
CGAGTAAGGACAGCAGGGCTGGACACCACTGCCCTGGTCACTGGCCTGCACCCCAACACCAAGT
ACCACGTGACTGTGCGGGCCTACAACCGGGCCGGCACTGGGCCCGCCAGCCCTGCTGCCAATGC
CACAACCATGAAGCCCCCTCCACGCCGACCCCCTGGCAACATCTCCTGGACTTTCTCAAGCTCC
AGTCTTAGTATTAAGTGGGATCCTGTGGTCGCGCTCCGAAATGAGTCTGCCGTCACAGGCTATA
AGATGCTGTACCAGAATGACTTACACNCCGACCCCACGCTCCACCTCACCAACAAGAACTGGAT
AGAAATTGCAGTGCCCGAAGATATCGGCCACGCCCTGGTGCAGATCCGGACCACAGGGCCTGGA
GGGGACGGGGTGCCGGCGGAAGTCCACATTGTGAAGAATGGAGGCACAAGCATGATGGTGGAGA
ACTCGGCAGTCTCTCCAGCCCCCCATCCTGGGACCGTCCTCTCTCACTCCGTGGTGACACTGAT
CCTCATAGGCTACCTGGAGCTCTGATCTTGGCACCCCTCCCTCTCTGCCGCAGCTGGACACCCT
GCCGATGGACACAGCCAGCTGGCCCCAGTCCCTTCCCGATGCCAAGGTGGCCCAACATTGTGCC
TGAAAACGGCTGGTTTTAAATGCCTACTTTAAACAGTGCCCTTTTCGTAGGAGGTAGGATATTT
CATATTCTGCCACAGGATAGAACCCACGTGAGGATTTTTTTTTTTTCTTTAAATCAAGAGGAAC
CAGGCAGTCACTTCCATGATGATACTGAACCCTATGCCTGGGCCTTCTCGAGTGCCTCGATGGA
AGAAAGGCCTTCAGAGAGAAGGGGGTTTTAAACATCCATCTGCACGTCAGCGGAGATGGCACTA
TGGGACCACGTGTGGACTCTGCCCCGGAGATCAGAGTCCTGGGCCCAGAGGGGACACTGGGCAT
GAACGGGCTGAAGTGAGACAAAGCATAAACAGCCACATCCCTCAGTCTGAGGGCCAAACCTTGG
GACCAGGGATTCTCCTACTTCTTCCTCTTAAAGGGCAGCATGGCTGGACCCTTGGTCCTCGATG
ACTCCCTGAGGCCTCTGCCACCTGCCCAGATGGCTGAGAACCAGTGCCCTGGTGTCAGGCCAGG
AGCCTGAGCCCCTGCAGTTCTAGGAGGTGACACTGCAGACTGTTGGGTTGCAAGAGCCAAGAAG
GGTTGAGAGGCTGGGACACCTGGTGGGAAGGGACACCAGACTTGGCCCGAGGCACAGTCACAGT
CCGAGTGACATTGCCCTCTAAGCCAACACTGCCAACCCGACCCTGTCACCCCAGAGTGACAGAG
GCACTACAGCTGGCTGGGTGACTAAAAGGCTTGTCACCCCACACAGTCCCTCCAGGATTTGAGC
AGGAGGCAGGAGACAGCGGTCATGCCCTCACTGTCTTCCGCCAGCAGAACGCAGCACTAATTCC
GTGTGTCCTGGAGTCAGGAGTCCTCTGAGAAGGGCCAAGGATAGAGGCGGCCCTGCTGGCTCCC
AGGAGTACCCTGGGCCACCTGGAGGCCCAAACCCCAGGCTGCCTCAGACTGCTCCCCAGCAGAC
GAAGGGGTAAATCCACGGGACGTCCTTCTGGGCGTATGCACACTAGGTACCGGTGACAGCATGT
CAGAGCTGGAGGAGGCTTTGGGAACCCCCCCGCCCCCCGAGCCCAAGCCCCTCACTCCTGGTGG
GGAAACAGAGGTTGGGTCAGGGCCTTGCTCAGGTCACACAGCTTGCTGGTGACAGGGCTGCAGT
AGCACCCCTCTCCTACCTTCCTGTTCAGGCTCATTGTCTTTTGGGAGGAAGGGAGCCCTGCTGA
CTGGCTGCAACCTGGTTTAAAAGGTGGTTAAGGGCAGCAGGCTATGAAAATTCTGCCTCGGTGG
GTGATGGTGGGGTGATTGGCACAGCTGGCTCCCAGCCCAAGGCATGTGCAGACTGCAGCAGACC
CAGTCTTTCTTTGCCTTCGGAGCCCAGCTTCTGCTGGGACCTCAACATGCAGTGCTGGCTTGAA
GCCCCCTGCTCCCCTTACGCTTGCTCCAAGCAAAGAGGCCAAAGCAAGGACAGGGATTTCCCCA
AATCCAGGCAGCAGTGGCAGCAGAGCCAGGAAATCCTAAAGCCTAGCTAGTGACAGGTGGTCCT
TCACACGCAGGAGCAGCGGGACAGGCATCTTGTAGGGGACAGGCCCCCTGAGCCTGGTTTCTGT
AGTTTACAGTTAGAGCTCTATTTTGTTATGGTTTTTTAAATTTTTAAGTCCTGCTCTGTTTTCC
TGGGCAGGTTTGTGTTGATGTTTACCCACTACAGTTTTTTAAAAATGTTAGCTCACACCCCTTC
TCCCGGCCACCACTGTAATCCACCATCCCGCCCCTGGCTCAGGACTGCCTCCCTGGAGCTGTCA
ACCAAACCCTCCTCACCTGCTCCTGTCCTTCGCCCCCACGCAAGGCGCTGGGGGCTCAGCTAAG
TGACCATTCTCCAATTGCAGGGACCCCAAACTTGGCCTAGCATCCGTCTGGTCCCCGTGGCTAT
GATATGGCCTGTACCCAGCTCTATCAGAAAGGGGATGCTGAAAGTAGGAAACCTACTTGCAATG
TTTAGCTGATTCTTTCCTCACTGCCTTGGGCCATGCTGCGGCCAGGGAAGCAGGGGGACAGATT
TCTAGATGCTGGGCCAAGAGGGATGAGCTGGTTTGGCACAGGACCTCCCCAATGCGGGCTGGAG
GCTGCCATTCTGTGCTTGCTTGAGGCAAGAGAGACAATTAAGAGTCTTAGTTCTACTGAGGCAG
ATGGACCCTCTGGGAAACCCAGGAAGGGTTTTTTAACTAGGAAAACTCAGCCTTAGGAAAAATG
GTGCAGGTAGAATTTGTTTGGGTGACACAGAACTGGATTAAACCAGATGTTCCTGCAGTCTGAG
GCTTCAGGTAGAATATTGATTAAAACAACATGGGTGATCTGAGGACACGCAGGCATGGAAAATG
GAAGAGCCTCTTGTTGAGCTGGCTGCACAGGAGCTGGTGTGGAGGCAGAAGATGAGATTAGGAC
GGCTTCTGAGTCCCTTCCTGCCCCAGAGGCCTCTGGTTTTCACCTCCTCTGCTCAGATGGGCTG
AGGCTCACACCTGCTGTGGTCACGACTCGATCCTGGCTCTCTTGATCCTGGATCTCTCCTCTCT
CATGCACCAAGCCCTAGATGACGCCACCAGAAGGAAACAGCCACAAACAAGTGCTTCACCCTAC
AGCATAGCGGCCAGTAAGTGCCTGAGGACTAGGGACAGAGATGGCCTGAAGGCTGCGGTTCAGG
GTTCAGGAGAGTTTCTCTGTTCTGCCTGTGCTGGGGCTCAGCCTGTGGGCCCTCTCCCCTGGCC
CCAGCTGCTCAGTCCTCGTTGCTCTGTCTCAGTGTATACCTCACCCCCAGGGGGAGGGCAGCTC
TCAGATGGAGTCTCAGGGCCCAGCAAGGTCAGGTTACCTACTTTCATTCAGGGCATCCAATGAT
ACAGGTGGTGCCAGGGAACAGGAGGGCCATGAGGCGGGGGCTCTTTTCCTTTGATACAATGACA
GGAGAGACTGAGGTTAGGCCTCAGGAGAGGCATCTGCGAGGAAACCCTGGAGTGAGTAATCGAG
AGGCTGCTGCCTTTTCTAGGGATCTTGGAGGAAGTTTGACAGCTGTTGGTTGTGCAGTCTAGGT
TAGATCAAGACTGGAGTGGACGCTTTAAGTGTCCTTCAGGGCTGAGATTCTTGGAATCCACAGT
TCAGCACAAGAAGTCTTGGTGCTTTTACCTGCTGTGGACCCTGCAGTGTTGGGGGGAAGTGGCT
GCAGCCACAGTCATTTAAATGGAAAGGCTCACCCCAGGCGCTCTTTTCCCAGCCTACCCTGCTG
CCTCTTGGTGGTCCCTGGAGCCACACTCGTCCTCTCTGGGCAAGAGCCTGAGCTGGCTCTGAGA
CTTTTACTCTCTCATTTCTTTCTGGGCTGAAGGATTCTCCTGGCTCTTTCTGGTCCCAGAATGG
GATGGCCTCCTGGATTCCTCTGTGGCAGAGGGAAAGCTGTATTCTTGAACCCAGGTTTGAGGCG
CAGGTGTGGTGCTGTTTCCCTGGCTCAGATCTAACTTGGTCTTTGTCCTGGGGGTGAGCAAGAT
TGCCAGGGAGGCTCCTGGACTGGCATGAGGGATCAGATGGATATTTTTAAGGGACTTTGAAGAG
CTCCATGGAAAGAGATGCCTGGTAGCTGTATATATGGTCATAGGTTTGAAAGGCAGGAAAATAA
AGGGAAACTGGAGAGGAAGAAAAAAAAAAGGGGTCAGATAGCTTTTCCCAGAGCCCTAGGAAGC
CTCATCCCCTCAGATGGGGTGCACCCAGCTTTGGCCCCCAGATTCCACTGACCACCCTCTCCGG
GGCCTGTATCGTTTAGACTAGCTCATGGCTGGGTGAGGGTTAGGGCTTCATTGGACCACTGACT
TAACTCAGTTTTGTTAAAATGGACCCGCTCCCACTGGCCTGTTGTCTGTCTCTCTTACACTTCT
TGTAATGGTAGTTATTTATTGACTCTGGTAGCGGGCAGTTCTTAAATAAAGATGGTTTCTCAAC
TGGCTGAGGTGGCTCGCA

hide sequence

Protein Sequences


Protein RefSeqs	XP_020918931	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000055015
	ENSSSCP00000055015.2
	ENSSSCP00015022268.1
	ENSSSCP00025011890.1
	ENSSSCP00035007120.1
	ENSSSCP00040015222.1
	ENSSSCP00045048480.1
	ENSSSCP00050034231.1
	ENSSSCP00055048520.1
	ENSSSCP00060021760.1
	ENSSSCP00065041445.1

RefSeq Acc Id:

XP_020918931 ⟸ XM_021063272

- UniProtKB:

A0A287BG37 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGTARRRKSHLLLLVAVVLVSAPAWSSARGSQATFGPVFEDQPLGLLFPEESTEEKVTLACRAR
ASPPATYRWKMNGTEMKLEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAVLR
FGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNL
YIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDTRLFAPSIKAKFPAETYALVGQQ
VTLECFAFGNPVPRIKWRKVDGSLSPQWATAEPTLQIPSVGFEDEGTYECEAENSKGRDTVQGR
IIVQAQPEWLKVISDMEADIGSNLHWGCAAAGKPRPTVRWLRNGEPLASQARVEVMAGDLRFSK
LSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPAARGGEIIIPCQPRAAPKA
VVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSVRDATKIT
LAPSSADINLGDNLTLQCHASHDPTMDLTFIWMLDDFPIDFDKPGGHYRRASVKETVGDLSILN
AQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVREIGDTTVQLSWSRGFDNHSPIAK
YTLQARTLPGKWKQVRTNPANIEGNAETAQVLGLTPWMDYEFRVVASNILGTGEPSGPSSKIRT
KEAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTSWQTARVPGADAQ
YFVYSNESVRPYTPFEVKIRSYNRRGEGPESLTALVYSAEEEPRVAPTKVWAQGVASSEMNVTW
EPVQQDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTTALVTGLHPNTKYHVTVRAYNRAGTG
PASPAANATTMKPPPRRPPGNISWTFSSSSLSIKWDPVVALRNESAVTGYKMLYQNDLHXDPTL
HLTNKNWIEIAVPEDIGHALVQIRTTGPGGDGVPAEVHIVKNGGTSMMVENSAVSPAPHPGTVL
SHSVVTLILIGYLEL

hide sequence

Ensembl Acc Id:

ENSSSCP00000040514 ⟸ ENSSSCT00000064707

Ensembl Acc Id:

ENSSSCP00000055015 ⟸ ENSSSCT00000045904

Protein Domains

Fibronectin type-III Ig-like

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000040824	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015041422	UniProtKB/TrEMBL
	ENSSSCG00025020695	UniProtKB/TrEMBL
	ENSSSCG00035015604	UniProtKB/TrEMBL
	ENSSSCG00040027343	UniProtKB/TrEMBL
	ENSSSCG00045039189	UniProtKB/TrEMBL
	ENSSSCG00050058396	UniProtKB/TrEMBL
	ENSSSCG00055030430	UniProtKB/TrEMBL
	ENSSSCG00060037703	UniProtKB/TrEMBL
	ENSSSCG00065069010	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000045904	ENTREZGENE
	ENSSSCT00000045904.3	UniProtKB/TrEMBL
	ENSSSCT00015055421.1	UniProtKB/TrEMBL
	ENSSSCT00025028103.1	UniProtKB/TrEMBL
	ENSSSCT00035019906.1	UniProtKB/TrEMBL
	ENSSSCT00040036629.1	UniProtKB/TrEMBL
	ENSSSCT00045068174.1	UniProtKB/TrEMBL
	ENSSSCT00050079619.1	UniProtKB/TrEMBL
	ENSSSCT00055060563.1	UniProtKB/TrEMBL
	ENSSSCT00060051017.1	UniProtKB/TrEMBL
	ENSSSCT00065094753.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.40.10	UniProtKB/TrEMBL
InterPro	Contactin-1_2_Ig1	UniProtKB/TrEMBL
	FN3_dom	UniProtKB/TrEMBL
	FN3_sf	UniProtKB/TrEMBL
	Ig-like_dom	UniProtKB/TrEMBL
	Ig-like_dom_sf	UniProtKB/TrEMBL
	Ig-like_fold	UniProtKB/TrEMBL
	Ig_I-set	UniProtKB/TrEMBL
	Ig_sub	UniProtKB/TrEMBL
	Ig_sub2	UniProtKB/TrEMBL
NCBI Gene	CNTN2	ENTREZGENE
PANTHER	CONTACTIN-2	UniProtKB/TrEMBL
	PROTEIN SIDEKICK	UniProtKB/TrEMBL
Pfam	fn3	UniProtKB/TrEMBL
	I-set	UniProtKB/TrEMBL
	Ig_3	UniProtKB/TrEMBL
PROSITE	FN3	UniProtKB/TrEMBL
	IG_LIKE	UniProtKB/TrEMBL
SMART	FN3	UniProtKB/TrEMBL
	IGc2	UniProtKB/TrEMBL
	SM00409	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48726	UniProtKB/TrEMBL
	SSF49265	UniProtKB/TrEMBL
UniProt	A0A287BG37	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0YTF9_PIG	UniProtKB/TrEMBL
	A0A8D2BIU0_PIG	UniProtKB/TrEMBL
VGNC ID	VGNC:108577	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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