RANBP3L (RAN binding protein 3 like)

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Gene: RANBP3L (RAN binding protein 3 like) Sus scrofa

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Symbol:

RANBP3L

Name:

RAN binding protein 3 like

RGD ID:

14252207

Description:

ENCODES a protein that exhibits SMAD binding (inferred); INVOLVED IN intracellular transport (inferred); mesenchymal cell differentiation involved in bone development (inferred); negative regulation of osteoblast differentiation (inferred); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

ran-binding protein 3-like

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	16	21,562,916 - 21,611,885 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	16	21,562,907 - 21,612,389 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	16	22,580,457 - 22,607,286 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Neurodevelopmental Disorders (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

intracellular transport (IEA)

mesenchymal cell differentiation involved in bone development (IEA)

negative regulation of osteoblast differentiation (IEA)

positive regulation of myoblast differentiation (IEA)

protein export from nucleus (IBA)

Cellular Component

cytoplasm (IBA)

nuclear pore (IBA)

Molecular Function

GTPase activator activity (IBA)

protein binding (ISO)

SMAD binding (IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

RANBP3L
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	16	21,562,916 - 21,611,885 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	16	21,562,907 - 21,612,389 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	16	22,580,457 - 22,607,286 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RANBP3L
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	36,246,913 - 36,301,902 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	36,246,913 - 36,302,114 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	36,247,015 - 36,302,004 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	36,284,861 - 36,337,761 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	5	36,134,779 - 36,187,682 (-)	NCBI		Celera
Cytogenetic Map	5	p13.2	NCBI
HuRef	5	36,200,738 - 36,253,651 (-)	NCBI		HuRef
CHM1_1	5	36,251,851 - 36,304,761 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	5	36,495,219 - 36,550,209 (-)	NCBI		T2T-CHM13v2.0

Ranbp3l
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	8,997,209 - 9,071,355 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	8,997,433 - 9,067,417 (+)	Ensembl		GRCm39 Ensembl
GRCm38	15	8,967,949 - 9,067,335 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	8,967,949 - 9,067,335 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	15	8,918,119 - 8,956,192 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv37	15	8,985,428 - 8,997,084 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	15	8,982,561 - 8,994,217 (+)	NCBI		MGSCv36	mm8
Celera	15	8,812,846 - 8,880,770 (+)	NCBI		Celera
Cytogenetic Map	15	A1	NCBI
cM Map	15	3.82	NCBI

Ranbp3l
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	59,785,070 - 59,840,338 (+)	NCBI		GRCr8
mRatBN7.2	2	58,057,887 - 58,113,158 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	58,058,263 - 58,113,172 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	2	58,221,773 - 58,458,072 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	58,448,917 - 58,458,517 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	76,758,985 - 76,772,450 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Rnor_5.0	2	77,510,913 - 77,544,728 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	58,666,640 - 58,720,647 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	58,590,213 - 58,649,178 (+)	NCBI
Celera	2	53,666,881 - 53,721,420 (+)	NCBI		Celera
Cytogenetic Map	2	q16	NCBI

Ranbp3l
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955426	21,052,647 - 21,107,110 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955426	21,054,463 - 21,106,290 (-)	NCBI	ChiLan1.0	ChiLan1.0

RANBP3L
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	74,027,847 - 74,081,610 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	72,181,479 - 72,236,614 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	74,061,669 - 74,115,154 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	79,343,218 - 79,396,901 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	79,343,218 - 79,396,121 (+)	Ensembl	panpan1.1		panPan2

NADK2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	72,297,480 - 72,341,176 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	72,297,114 - 72,339,460 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	71,907,202 - 71,950,907 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	72,805,112 - 72,848,811 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	72,804,721 - 72,848,810 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	72,550,564 - 72,594,244 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	72,674,148 - 72,717,850 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	73,207,561 - 73,251,269 (+)	NCBI		UU_Cfam_GSD_1.0

Ranbp3l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	225,773,116 - 225,840,760 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936518	5,531,004 - 5,579,942 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936518	5,531,094 - 5,579,471 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RANBP3L
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	4	35,095,520 - 35,156,378 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	4	35,096,196 - 35,155,543 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666071	25,426,557 - 25,477,496 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ranbp3l
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624759	18,710,586 - 18,771,131 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624759	18,710,876 - 18,769,727 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in RANBP3L
1863 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	4	19	1	4	9	8	19	3	2	1

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_021076594	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021076595	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000102	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU856110	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU856502	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01097526	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000018333 ⟹ ENSSSCP00000017837

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	16	21,562,916 - 21,611,885 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000018334 ⟹ ENSSSCP00000017838

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	16	21,562,916 - 21,611,885 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000070510 ⟹ ENSSSCP00000073635

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	16	21,573,179 - 21,611,885 (-)	Ensembl

RefSeq Acc Id:

XM_021076594 ⟹ XP_020932253

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	16	21,562,907 - 21,612,386 (-)	NCBI

Sequence:

show sequence

GAAAACACTGGAAATAGCCTTGTCTCATGACCTAGAAGTAGCAATAGAGAATCTAAAGGGAAAC
AGAGATAGATCTCTGGAAAGATAAAGTTTAGTGTGTTTATTTTTCTTCCAGGGCTCCAGATAGT
TGCCTTGGCAGGCAGACTGCTCTAAAACTGCCCCCCTTCTGAGGACTCAGAGGTGTTTACAGAA
ATCGAAAGTTCCAGCAGTACATTTCCATGAGCTCATTACCACTTCCTTTAGATTTTGCATGTAC
GAGGGAATATTCATGCAGTATAAACCCCTGCTTTGAGCTTTTGTTTTAATTACAAACAAAGCAG
CACAAGTCAAATATGTGAATACTGCAACGTCAGAGCATCTTTTTAGAATCCTTGCTTTGGTCAC
TATTATTGAAAGCAACCCCAATGCCATTTCTTGCCTGTCTCTTTATGCTAATCGGCCTGGCCCA
CTCAGCTCCTCCCCCTTCCAGCCTCCCTTAAGAACTGTTCACTTTCAGCTGTCACGGAGGGTAA
CTTAAACCAGGCTTAGAATCACTTGATTTAACTCAGCAGCACTTTTTTTTTTTTTCTTTGTGTA
TGTATGACTCTAGCAGACATCTCTAAATACTCAGGACATTAGATTTCAAGTCCGCAGAGAGAGT
CGAAAATTGCAAAACTGTAATCTGTTAGGAAGAGTTACTTTGCAGGATTTTATATTATAAGGGG
GCATGTTTCAATGTGCTTTTAAATGGAAGAAGAATTAATTGTGCTTTTATCCAAATGAATTGGC
ATCTTTATATGCAGAAGAAGCTACAAGTTGGTAAACACATATTTTAAGAATCATGACTAGGAAA
CATTTGAAAATTCATTAGAGAAGTAAATATTTTTCCATGCAAGGACAGGATCTGCCTATACCTC
TGTGGTTCTGGGTGTTGTGTGAAGACCACTGCAGGTGACTGGCCAAGGGAAGGAAATACCCTAG
TGATACGGGAGCCACAGCCGTACTGCCAGCACCATGTCTACCATACAAAGCAAAGGCAGCAGCC
ACCTGTTCAACAGTTTGCACACCTGTAGATGGAAACTTCCAGAGGACCAGCAACATCAAGAAAA
ATCTGTCATTGCTCAACCAATATTTGTTTTTGAAAAGAGAGAACAAATTTTAAGCTTTGTTTCC
TTCCAGAGACCTGCAGAAGACACCCTGCATGAAGCAGCAGAACGTGAGTGTAATGATTTTTCAA
GAAAGCGTGTCCGGTCCTCATCTTTTCCTTTGCACGCTACAGATTCTCAGTCCCAAGGAGTGAA
GAAAAACAATGTTTTTATGATACCAACTTTTGTGCAAAGAAAAATTGATACGAACAGTGCTGAA
CAAGGTCCTGTGAAAAATTCTGAACATGTTCTGAGACCTGCTATTTTACAGCCACCTCAAGCTC
AAAGATGTGTAAGATTTGGACACAATGTGTTGGAGTCCTGCAAGACTACAGAAAAAAATAAAAA
TAGGATTTCTGAGGGTAACTCATATTTGCTAAGTGAAAATGTACCAAGTGCCAGAATTTCAGTC
CAGCAGGCTACTAACCAGAATGTTTTAGGTGCTACATCAGTAGGATGTCAACCAAATGAAGATA
AGCATTCTTTTAAAAGTTGCAGTTCTGATTTCATTTTTGGAGAAAACATGTTAGAAAGAGTTTT
GGGTATTCAAAACCTCACCCAGTCTCACCTTGAAAATGATTCGTACATCAAGGAAAAGCCATTC
AAATTCACTCTAAAATTTCCTATCAACTCTCCAAACTCAAGAATAGACTCTACTAAAGATATAT
CCCTCATTGAATCAGCTGCTGCTTTCTCTTCTAAACCCTCACCAAAATATTTGCTGGAGAAAAT
TGATGTTATAACAGGGGAGGAAGCAGAACACAATGTGTTAAAGATCAATTGCAAGCTTTTTATA
TTCAACAAACCAGCACAATCCTGGATTGAAAGGGGAAGAGGAGCTTTGAGACTGAATGACACAG
CTGGCAGTGACTGTGCAACATTCCAGTCAAGACTAATTATGCGAAATCAAGGCAGCCTGAGGCT
GATTCTCAACAGCAAACTCTGGGCTCAAATGGAGATTCAAAGAGCAAGCCACAAAAATTTACGA
ATAACAGCTACTGATTTAGAAGACTATCATATCAAAGTGTTTTTAATTCAGGCCAGTGCCAAAG
ATACAGGACGCTTGCACACAGCCATACATCATCGTCTTGTTGCACTTCGAAGCTTTGAAGAGCA
GAAAGATGCAAATCAAGCTGAAAGCCAGTCAGAAACAGTCCTCCAACAGTTAAGCTCTGATAGC
TGTGATGAGGATGAGGATGATCTCAGCCAAGTCACCAAAACCAGATCAGACTCTTCTAGGTGGA
CCCACAGACAGTCAGTTGTCTGTCCATGAGTGCTACCTACTGTAAACAAGACAACATCTACAAA
AAGATCACCTTCCTGAAAAAAACTAAACCACCTAAGTAAATGAGAAGATCTATTCATTCCTTGA
ACAGTTGTTATAGAAAGCTCAAAAAATATAATTTGCTGCAATTAAAATCTTTGTCTTATGTAGT
CTAATAATTCTGAGGTTTTATATTTTGATCATTGAGGAGAAAATGACAGAATTTAAGAAATACA
CAGCCTTTGGACCTTCCAAATTTATCACTTTTAAAGCAGTTAATTTAGAATAGGATTTGGTAAC
GAATTTGGACTCTTCGTCACATTGATGGATACAATAATTAAAATTTCAAATCACTAGATTTGAT
AAATATTTAACTGAAATTGTTTATTTTTGTCATATGTTATCTGGCCATAAAATATAGCATTTTA
CAAAACTTCCAAAGTCATTTCTTTGAAAAACATTACAACTGCATGATGACATCTCATAAAATCA
TGTTTTCTCCTGGGAAATGTGTATTTTCATTTTACTTTTGGATTTCTTAATTCTGTAAGATTAC
ATATTCATGATATGAATTCCTTTAAAAAGAGGATCTGTTCTTGCACTTGTATCTACTGCACCTT
ATATATGCTTAACTCATGGTCAGTATTGATAGTTGTTGAGAATGAACAAAATACATTACCTATG
TATCCAAATAGTAAGTAAACAAAAAGTGAAATATGTTAACTTGTTCTTTGCTTGATTTATGTAA
TAAAATTGTCATTAATATTCTA

hide sequence

RefSeq Acc Id:

XM_021076595 ⟹ XP_020932254

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	16	21,562,907 - 21,612,389 (-)	NCBI

Sequence:

show sequence

ACAGAAAACACTGGAAATAGCCTTGTCTCATGACCTAGAAGTAGCAATAGAGAATCTAAAGGGA
AACAGAGATAGATCTCTGGAAAGATAAAGTTTAGTGTGTTTATTTTTCTTCCAGGGCTCCAGAT
AGTTGCCTTGGCAGGCAGACTGCTCTAAAACTGCCCCCCTTCTGAGGACTCAGAGGTGTTTACA
GAAATCGAAAGTTCCAGCAGTACATTTCCATGAGCTCATTACCACTTCCTTTAGATTTTGCATG
TACGAGGGAATATTCATGCAGTATAAACCCCTGCTTTGAGCTTTTGTTTTAATTACAAACAAAG
CAGCACAAGTCAAATATGTGAATACTGCAACGTCAGAGCATCTTTTTAGAATCCTTGCTTTGGT
CACTATTATTGAAAGCAACCCCAATGCCATTTCTTGCCTGTCTCTTTATGCTAATCGGCCTGGC
CCACTCAGCTCCTCCCCCTTCCAGCCTCCCTTAAGAACTGTTCACTTTCAGCTGTCACGGAGGG
TAACTTAAACCAGGCTTAGAATCACTTGATTTAACTCAGCAGCACTTTTTTTTTTTTTCTTTGT
GTATGTATGACTCTAGCAGACATCTCTAAATACTCAGGACATTAGATTTCAAGTCCGCAGAGAG
AGTCGAAAATTGCAAAACTGTAATCTGTTAGGAAGAGTTACTTTGCAGGATTTTATATTATAAG
GGGGCATGTTTCAATGTGCTTTTAAATGGAAGAAGAATTAATTGTGCTTTTATCCAAATGAATT
GGCATCTTTATATGCAGAAGAAGCTACAAGTTGGTAAACACATATTTTAAGAATCATGACTAGG
AAACATTTGAAAATTCATTAGAGAAGTAAATATTTTTCCATGCAAGGACAGGATCTGCCTATAC
CTCTGTGGTTCTGGGTGTTGTGTGAAGACCACTGCAGGTGACTGGCCAAGGGAAGGAAATACCC
TAGTGATACGGGAGCCACAGCCGTACTGCCAGCACCATGTCTACCATACAAAGCAAAGGCAGCA
GCCACCTGTTCAACAGTTTGCACACCTGTAGATGGAAACTTCCAGAGGACCAGCAACATCAAGA
AAAATCTGTCATTGCTCAACCAATATTTGTTTTTGAAAAGAGAGAACAAATTTTAAGCTTTGTT
TCCTTCCAGAGACCTGCAGAAGACACCCTGCATGAAGCAGCAGAACGTGAGTGTAATGATTTTT
CAAGAAAGCGTGTCCGGTCCTCATCTTTTCCTTTGCACGCTACAGATTCTCAGTCCCAAGGAGT
TTCTGCATTAAGCATCGTCATCCTTGTCCTGAAGCGACTGAGATCATCATCCTTCACGGACCTT
CCCACCTTCCCCCATTCTGGGCCAGTGAAGAAAAACAATGTTTTTATGATACCAACTTTTGTGC
AAAGAAAAATTGATACGAACAGTGCTGAACAAGGTCCTGTGAAAAATTCTGAACATGTTCTGAG
ACCTGCTATTTTACAGCCACCTCAAGCTCAAAGATGTGTAAGATTTGGACACAATGTGTTGGAG
TCCTGCAAGACTACAGAAAAAAATAAAAATAGGATTTCTGAGGGTAACTCATATTTGCTAAGTG
AAAATGTACCAAGTGCCAGAATTTCAGTCCAGCAGGCTACTAACCAGAATGTTTTAGGTGCTAC
ATCAGTAGGATGTCAACCAAATGAAGATAAGCATTCTTTTAAAAGTTGCAGTTCTGATTTCATT
TTTGGAGAAAACATGTTAGAAAGAGTTTTGGGTATTCAAAACCTCACCCAGTCTCACCTTGAAA
ATGATTCGTACATCAAGGAAAAGCCATTCAAATTCACTCTAAAATTTCCTATCAACTCTCCAAA
CTCAAGAATAGACTCTACTAAAGATATATCCCTCATTGAATCAGCTGCTGCTTTCTCTTCTAAA
CCCTCACCAAAATATTTGCTGGAGAAAATTGATGTTATAACAGGGGAGGAAGCAGAACACAATG
TGTTAAAGATCAATTGCAAGCTTTTTATATTCAACAAACCAGCACAATCCTGGATTGAAAGGGG
AAGAGGAGCTTTGAGACTGAATGACACAGCTGGCAGTGACTGTGCAACATTCCAGTCAAGACTA
ATTATGCGAAATCAAGGCAGCCTGAGGCTGATTCTCAACAGCAAACTCTGGGCTCAAATGGAGA
TTCAAAGAGCAAGCCACAAAAATTTACGAATAACAGCTACTGATTTAGAAGACTATCATATCAA
AGTGTTTTTAATTCAGGCCAGTGCCAAAGATACAGGACGCTTGCACACAGCCATACATCATCGT
CTTGTTGCACTTCGAAGCTTTGAAGAGCAGAAAGATGCAAATCAAGCTGAAAGCCAGTCAGAAA
CAGTCCTCCAACAGTTAAGCTCTGATAGCTGTGATGAGGATGAGGATGATCTCAGCCAAGTCAC
CAAAACCAGATCAGACTCTTCTAGGTGGACCCACAGACAGTCAGTTGTCTGTCCATGAGTGCTA
CCTACTGTAAACAAGACAACATCTACAAAAAGATCACCTTCCTGAAAAAAACTAAACCACCTAA
GTAAATGAGAAGATCTATTCATTCCTTGAACAGTTGTTATAGAAAGCTCAAAAAATATAATTTG
CTGCAATTAAAATCTTTGTCTTATGTAGTCTAATAATTCTGAGGTTTTATATTTTGATCATTGA
GGAGAAAATGACAGAATTTAAGAAATACACAGCCTTTGGACCTTCCAAATTTATCACTTTTAAA
GCAGTTAATTTAGAATAGGATTTGGTAACGAATTTGGACTCTTCGTCACATTGATGGATACAAT
AATTAAAATTTCAAATCACTAGATTTGATAAATATTTAACTGAAATTGTTTATTTTTGTCATAT
GTTATCTGGCCATAAAATATAGCATTTTACAAAACTTCCAAAGTCATTTCTTTGAAAAACATTA
CAACTGCATGATGACATCTCATAAAATCATGTTTTCTCCTGGGAAATGTGTATTTTCATTTTAC
TTTTGGATTTCTTAATTCTGTAAGATTACATATTCATGATATGAATTCCTTTAAAAAGAGGATC
TGTTCTTGCACTTGTATCTACTGCACCTTATATATGCTTAACTCATGGTCAGTATTGATAGTTG
TTGAGAATGAACAAAATACATTACCTATGTATCCAAATAGTAAGTAAACAAAAAGTGAAATATG
TTAACTTGTTCTTTGCTTGATTTATGTAATAAAATTGTCATTAATATTCTA

hide sequence

Protein Sequences


Protein RefSeqs	XP_020932253	(Get FASTA)	NCBI Sequence Viewer
	XP_020932254	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000017837
	ENSSSCP00000017837.4
	ENSSSCP00000017838
	ENSSSCP00000017838.4
	ENSSSCP00000073635.1
	ENSSSCP00040033364.1
	ENSSSCP00070012381.1
	ENSSSCP00070012405.1
	ENSSSCP00070012411.1

RefSeq Acc Id:	XP_020932254 ⟸ XM_021076595
- Peptide Label:	isoform X2
- UniProtKB:	A0A8D1KGA3 (UniProtKB/TrEMBL), F1SNB4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSTIQSKGSSHLFNSLHTCRWKLPEDQQHQEKSVIAQPIFVFEKREQILSFVSFQRPAEDTLHE AAERECNDFSRKRVRSSSFPLHATDSQSQGVSALSIVILVLKRLRSSSFTDLPTFPHSGPVKKN NVFMIPTFVQRKIDTNSAEQGPVKNSEHVLRPAILQPPQAQRCVRFGHNVLESCKTTEKNKNRI SEGNSYLLSENVPSARISVQQATNQNVLGATSVGCQPNEDKHSFKSCSSDFIFGENMLERVLGI QNLTQSHLENDSYIKEKPFKFTLKFPINSPNSRIDSTKDISLIESAAAFSSKPSPKYLLEKIDV ITGEEAEHNVLKINCKLFIFNKPAQSWIERGRGALRLNDTAGSDCATFQSRLIMRNQGSLRLIL NSKLWAQMEIQRASHKNLRITATDLEDYHIKVFLIQASAKDTGRLHTAIHHRLVALRSFEEQKD ANQAESQSETVLQQLSSDSCDEDEDDLSQVTKTRSDSSRWTHRQSVVCP hide sequence

RefSeq Acc Id:	XP_020932253 ⟸ XM_021076594
- Peptide Label:	isoform X1
- UniProtKB:	A0A5K1U9H9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSTIQSKGSSHLFNSLHTCRWKLPEDQQHQEKSVIAQPIFVFEKREQILSFVSFQRPAEDTLHE AAERECNDFSRKRVRSSSFPLHATDSQSQGVKKNNVFMIPTFVQRKIDTNSAEQGPVKNSEHVL RPAILQPPQAQRCVRFGHNVLESCKTTEKNKNRISEGNSYLLSENVPSARISVQQATNQNVLGA TSVGCQPNEDKHSFKSCSSDFIFGENMLERVLGIQNLTQSHLENDSYIKEKPFKFTLKFPINSP NSRIDSTKDISLIESAAAFSSKPSPKYLLEKIDVITGEEAEHNVLKINCKLFIFNKPAQSWIER GRGALRLNDTAGSDCATFQSRLIMRNQGSLRLILNSKLWAQMEIQRASHKNLRITATDLEDYHI KVFLIQASAKDTGRLHTAIHHRLVALRSFEEQKDANQAESQSETVLQQLSSDSCDEDEDDLSQV TKTRSDSSRWTHRQSVVCP hide sequence

Ensembl Acc Id:

ENSSSCP00000073635 ⟸ ENSSSCT00000070510

Ensembl Acc Id:

ENSSSCP00000017838 ⟸ ENSSSCT00000018334

Ensembl Acc Id:

ENSSSCP00000017837 ⟸ ENSSSCT00000018333

Protein Domains

RanBD1

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000016838	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00040057238	UniProtKB/TrEMBL
	ENSSSCG00070007728	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000018333	ENTREZGENE
	ENSSSCT00000018333.4	UniProtKB/TrEMBL
	ENSSSCT00000018334	ENTREZGENE
	ENSSSCT00000018334.4	UniProtKB/TrEMBL
	ENSSSCT00000070510.1	UniProtKB/TrEMBL
	ENSSSCT00040077550.1	UniProtKB/TrEMBL
	ENSSSCT00070014962.1	UniProtKB/TrEMBL
	ENSSSCT00070014992.1	UniProtKB/TrEMBL
	ENSSSCT00070015000.1	UniProtKB/TrEMBL
Gene3D-CATH	2.30.29.30	UniProtKB/TrEMBL
InterPro	PH-like_dom_sf	UniProtKB/TrEMBL
	Ran_bind_dom	UniProtKB/TrEMBL
	RanBP1-like	UniProtKB/TrEMBL
NCBI Gene	RANBP3L	ENTREZGENE
PANTHER	PTHR23138	UniProtKB/TrEMBL
	RAN-BINDING PROTEIN 3-LIKE	UniProtKB/TrEMBL
Pfam	Ran_BP1	UniProtKB/TrEMBL
PROSITE	RANBD1	UniProtKB/TrEMBL
SMART	RanBD	UniProtKB/TrEMBL
Superfamily-SCOP	PH domain-like	UniProtKB/TrEMBL
UniProt	A0A4X1TAN1_PIG	UniProtKB/TrEMBL
	A0A4X1TB46_PIG	UniProtKB/TrEMBL
	A0A4X1TB61_PIG	UniProtKB/TrEMBL
	A0A5G2RBD5_PIG	UniProtKB/TrEMBL
	A0A5K1U9H9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1KGA3	ENTREZGENE, UniProtKB/TrEMBL
	F1SNB4	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:92080	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar