DOK4 (docking protein 4) - Rat Genome Database

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Gene: DOK4 (docking protein 4) Sus scrofa
Analyze
Symbol: DOK4
Name: docking protein 4
RGD ID: 14250890
Description: INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); nervous system development (ortholog); positive regulation of MAPK cascade (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); developmental and epileptic encephalopathy (ortholog); early infantile epileptic encephalopathy (ortholog); FOUND IN cytoplasm (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl619,401,075 - 19,413,654 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1619,400,945 - 19,427,038 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2617,391,781 - 17,417,351 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:14681463   PMID:17145712   PMID:30032202  


Genomics

Comparative Map Data
DOK4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl619,401,075 - 19,413,654 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1619,400,945 - 19,427,038 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2617,391,781 - 17,417,351 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DOK4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381657,471,922 - 57,487,322 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1657,471,922 - 57,487,327 (-)EnsemblGRCh38hg38GRCh38
GRCh371657,505,834 - 57,521,234 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361656,063,374 - 56,077,828 (-)NCBINCBI36Build 36hg18NCBI36
Build 341656,063,374 - 56,077,828NCBI
Celera1642,006,722 - 42,021,228 (-)NCBICelera
Cytogenetic Map16q21NCBI
HuRef1643,373,518 - 43,387,961 (-)NCBIHuRef
CHM1_11658,913,924 - 58,928,449 (-)NCBICHM1_1
T2T-CHM13v2.01663,267,111 - 63,282,532 (-)NCBIT2T-CHM13v2.0
Dok4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39895,590,456 - 95,602,940 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl895,590,456 - 95,602,958 (-)EnsemblGRCm39 Ensembl
GRCm38894,863,828 - 94,876,312 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl894,863,828 - 94,876,330 (-)EnsemblGRCm38mm10GRCm38
MGSCv37897,387,728 - 97,400,212 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36897,752,989 - 97,765,403 (-)NCBIMGSCv36mm8
Celera899,188,439 - 99,200,990 (-)NCBICelera
Cytogenetic Map8C5NCBI
cM Map846.93NCBI
Dok4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81910,152,511 - 10,163,182 (+)NCBIGRCr8
mRatBN7.21910,146,520 - 10,157,187 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1910,146,474 - 10,158,203 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1910,110,615 - 10,121,334 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01910,877,459 - 10,888,178 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01910,164,407 - 10,175,126 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01910,563,423 - 10,574,094 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1910,563,423 - 10,574,093 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01910,558,204 - 10,569,911 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41910,585,647 - 10,596,322 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11910,590,459 - 10,602,164 (+)NCBI
Celera1910,033,165 - 10,043,796 (+)NCBICelera
Cytogenetic Map19p13NCBI
Dok4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543315,104,394 - 15,116,271 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543315,104,387 - 15,116,118 (-)NCBIChiLan1.0ChiLan1.0
DOK4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21866,942,224 - 66,956,686 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11672,864,263 - 72,877,529 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01637,748,004 - 37,762,435 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11656,880,899 - 56,888,765 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1656,880,935 - 56,888,765 (-)Ensemblpanpan1.1panPan2
DOK4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1258,945,667 - 58,953,206 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl258,946,397 - 58,953,498 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha255,575,237 - 55,583,108 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0259,484,086 - 59,491,944 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl259,484,670 - 59,491,939 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1256,315,471 - 56,323,355 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0257,323,165 - 57,331,026 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0258,216,632 - 58,224,522 (+)NCBIUU_Cfam_GSD_1.0
Dok4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934950,052,787 - 50,060,739 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364759,528,347 - 9,535,683 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364759,528,342 - 9,535,683 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DOK4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1543,403,893 - 43,418,062 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl543,401,576 - 43,412,287 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604732,801,020 - 32,815,160 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dok4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474628,593,901 - 28,604,276 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474628,590,997 - 28,603,872 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in DOK4
859 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium
Low 10 1 3 4 1 23 2 3 1
Below cutoff 3 1 1

Sequence


RefSeq Acc Id: ENSSSCT00000024456   ⟹   ENSSSCP00000020048
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl619,401,075 - 19,413,654 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000066533   ⟹   ENSSSCP00000063115
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl619,401,076 - 19,407,663 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000070437   ⟹   ENSSSCP00000074129
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl619,401,076 - 19,408,988 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000080646   ⟹   ENSSSCP00000071320
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl619,401,076 - 19,407,663 (-)Ensembl
RefSeq Acc Id: XM_003355800   ⟹   XP_003355848
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1619,400,945 - 19,413,651 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005655786   ⟹   XP_005655843
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1619,400,945 - 19,427,038 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005655787   ⟹   XP_005655844
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1619,400,945 - 19,409,843 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013988524   ⟹   XP_013843978
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1619,400,945 - 19,408,480 (-)NCBI
Sequence:
RefSeq Acc Id: XP_005655843   ⟸   XM_005655786
- UniProtKB: I3L7P2 (UniProtKB/TrEMBL),   A0A4X1UYW0 (UniProtKB/TrEMBL),   A0A480SYL8 (UniProtKB/TrEMBL),   A0A8D1DBZ2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003355848   ⟸   XM_003355800
- UniProtKB: I3L7P2 (UniProtKB/TrEMBL),   A0A4X1UYW0 (UniProtKB/TrEMBL),   A0A480SYL8 (UniProtKB/TrEMBL),   A0A8D1DBZ2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005655844   ⟸   XM_005655787
- UniProtKB: I3L7P2 (UniProtKB/TrEMBL),   A0A4X1UYW0 (UniProtKB/TrEMBL),   A0A480SYL8 (UniProtKB/TrEMBL),   A0A8D1DBZ2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013843978   ⟸   XM_013988524
- UniProtKB: I3L7P2 (UniProtKB/TrEMBL),   A0A4X1UYW0 (UniProtKB/TrEMBL),   A0A480SYL8 (UniProtKB/TrEMBL),   A0A8D1DBZ2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000020048   ⟸   ENSSSCT00000024456
RefSeq Acc Id: ENSSSCP00000071320   ⟸   ENSSSCT00000080646
RefSeq Acc Id: ENSSSCP00000074129   ⟸   ENSSSCT00000070437
RefSeq Acc Id: ENSSSCP00000063115   ⟸   ENSSSCT00000066533
Protein Domains
IRS-type PTB


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000029165 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015069694 UniProtKB/TrEMBL
  ENSSSCG00025068241 UniProtKB/TrEMBL
  ENSSSCG00030065108 UniProtKB/TrEMBL
  ENSSSCG00035074931 UniProtKB/TrEMBL
  ENSSSCG00040009719 UniProtKB/TrEMBL
  ENSSSCG00045026474 UniProtKB/TrEMBL
  ENSSSCG00050034347 UniProtKB/TrEMBL
  ENSSSCG00055027626 UniProtKB/TrEMBL
  ENSSSCG00060077054 UniProtKB/TrEMBL
  ENSSSCG00070020663 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000024456 ENTREZGENE
  ENSSSCT00000024456.3 UniProtKB/TrEMBL
  ENSSSCT00000066533 ENTREZGENE
  ENSSSCT00000066533.1 UniProtKB/TrEMBL
  ENSSSCT00000070437.1 UniProtKB/TrEMBL
  ENSSSCT00015093350.1 UniProtKB/TrEMBL
  ENSSSCT00015093396.1 UniProtKB/TrEMBL
  ENSSSCT00015093434.1 UniProtKB/TrEMBL
  ENSSSCT00015093457.1 UniProtKB/TrEMBL
  ENSSSCT00025093734.1 UniProtKB/TrEMBL
  ENSSSCT00030090973.1 UniProtKB/TrEMBL
  ENSSSCT00030090994.1 UniProtKB/TrEMBL
  ENSSSCT00030091015.1 UniProtKB/TrEMBL
  ENSSSCT00030091039.1 UniProtKB/TrEMBL
  ENSSSCT00035101809.1 UniProtKB/TrEMBL
  ENSSSCT00035101815.1 UniProtKB/TrEMBL
  ENSSSCT00035101824.1 UniProtKB/TrEMBL
  ENSSSCT00035101830.1 UniProtKB/TrEMBL
  ENSSSCT00040012570.1 UniProtKB/TrEMBL
  ENSSSCT00040012588.1 UniProtKB/TrEMBL
  ENSSSCT00040012600.1 UniProtKB/TrEMBL
  ENSSSCT00040012605.1 UniProtKB/TrEMBL
  ENSSSCT00045045066.1 UniProtKB/TrEMBL
  ENSSSCT00045045175.1 UniProtKB/TrEMBL
  ENSSSCT00045045259.1 UniProtKB/TrEMBL
  ENSSSCT00045045325.1 UniProtKB/TrEMBL
  ENSSSCT00050046058.1 UniProtKB/TrEMBL
  ENSSSCT00050046073.1 UniProtKB/TrEMBL
  ENSSSCT00050046077.1 UniProtKB/TrEMBL
  ENSSSCT00050046084.1 UniProtKB/TrEMBL
  ENSSSCT00055054641.1 UniProtKB/TrEMBL
  ENSSSCT00055054688.1 UniProtKB/TrEMBL
  ENSSSCT00055054731.1 UniProtKB/TrEMBL
  ENSSSCT00055054762.1 UniProtKB/TrEMBL
  ENSSSCT00060105938.1 UniProtKB/TrEMBL
  ENSSSCT00060105948.1 UniProtKB/TrEMBL
  ENSSSCT00060105963.1 UniProtKB/TrEMBL
  ENSSSCT00060105984.1 UniProtKB/TrEMBL
  ENSSSCT00070041106.1 UniProtKB/TrEMBL
  ENSSSCT00070041117.1 UniProtKB/TrEMBL
Gene3D-CATH 2.30.29.30 UniProtKB/TrEMBL
InterPro DOK4/5/6_PH UniProtKB/TrEMBL
  IRS_PTB UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/TrEMBL
  PH_domain UniProtKB/TrEMBL
KEGG Report ssc:100620637 UniProtKB/TrEMBL
NCBI Gene DOK4 ENTREZGENE
PANTHER DOCKING PROTEIN 4 UniProtKB/TrEMBL
  DOCKING PROTEIN RELATED UniProtKB/TrEMBL
Pfam IRS UniProtKB/TrEMBL
  PF00169 UniProtKB/TrEMBL
PROSITE IRS_PTB UniProtKB/TrEMBL
SMART IRS UniProtKB/TrEMBL
  PTBI UniProtKB/TrEMBL
  SM00233 UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/TrEMBL
UniProt A0A480SYL8 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1UYW0 ENTREZGENE, UniProtKB/TrEMBL
  A0A5G2QEK9_PIG UniProtKB/TrEMBL
  A0A5G2R9Z6_PIG UniProtKB/TrEMBL
  A0A8D0PTW8_PIG UniProtKB/TrEMBL
  A0A8D1BG45_PIG UniProtKB/TrEMBL
  A0A8D1DBZ2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1DC03_PIG UniProtKB/TrEMBL
  A0A8D1M8X3_PIG UniProtKB/TrEMBL
  I3L7P2 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:87403 ENTREZGENE