| Symbol: |
MDFIC2 |
| Name: |
MyoD family inhibitor domain containing 2 |
| RGD ID: |
14243523 |
| Description: |
|
| Type: |
protein-coding
|
| RefSeq Status: |
MODEL |
| Previously known as: |
myoD family inhibitor domain-containing protein |
| RGD Orthologs |
|
| Alliance Genes |
|
| More Info |
more info ...
|
| More Info |
|
| Latest Assembly: |
Sscrofa11.1 - Pig Sscrofa11.1 Assembly |
| Position: |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | 13 | 51,633,083 - 51,741,546 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 13 | 51,631,445 - 51,742,570 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 13 | 56,832,814 - 56,913,242 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
| JBrowse: |
View Region in Genome Browser (JBrowse)
|
| Model |
|
References
Genomics
Comparative Map Data
MDFIC2
(Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | 13 | 51,633,083 - 51,741,546 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 13 | 51,631,445 - 51,742,570 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 13 | 56,832,814 - 56,913,242 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
MDFIC2
(Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 3 | 70,194,479 - 70,312,638 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 3 | 70,194,479 - 70,312,638 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 3 | 70,243,630 - 70,361,789 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Cytogenetic Map | 3 | p13 | NCBI | | | | | CHM1_1 | 3 | 70,194,911 - 70,313,069 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 3 | 70,231,398 - 70,349,463 (-) | NCBI | | T2T-CHM13v2.0 | | |
|
Mdfic2
(Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | 6 | 98,212,665 - 98,319,715 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 6 | 98,212,669 - 98,319,715 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 6 | 98,238,014 - 98,342,754 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 6 | 98,235,708 - 98,342,754 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 6 | 98,188,008 - 98,292,748 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 6 | 98,203,540 - 98,308,135 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 6 | 100,098,354 - 100,203,386 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | D3 | NCBI | | | | | cM Map | 6 | 45.67 | NCBI | | | | |
|
Mdfic2
(Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | 4 | 132,401,899 - 132,504,412 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 4 | 130,845,260 - 130,948,054 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 4 | 130,846,890 - 130,947,093 (-) | Ensembl | | mRatBN7.2 Ensembl | | | Rnor_6.0 | 4 | 130,649,564 - 130,751,397 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_5.0 | 4 | 195,031,931 - 195,246,182 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 4 | 132,858,542 - 133,083,891 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 4 | 119,718,570 - 119,821,412 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | q34 | NCBI | | | | |
|
MDFIC2
(Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | 2 | 70,152,485 - 70,270,684 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 3 | 70,157,272 - 70,275,471 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 3 | 70,133,229 - 70,251,520 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 3 | 71,497,457 - 71,612,601 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 3 | 71,497,457 - 71,611,948 (-) | Ensembl | panpan1.1 | | panPan2 | |
|
MDFIC2
(Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ROS_Cfam_1.0 | 20 | 21,688,781 - 21,700,981 (+) | NCBI | | ROS_Cfam_1.0 | | | UMICH_Zoey_3.1 | 20 | 21,348,879 - 21,386,144 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 20 | 21,722,827 - 21,735,020 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 20 | 21,793,003 - 21,805,211 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
Mdfic2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
HiC_Itri_2 | NW_024404942 | 2,041,577 - 2,136,177 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936603 | 2,042,355 - 2,135,503 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936603 | 2,042,355 - 2,052,291 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
MDFIC2
(Chlorocebus sabaeus - green monkey) |
|
Mdfic2
(Heterocephalus glaber - naked mole-rat) |
|
Expression
RNA-SEQ Expression
High: > 1000 TPM value
Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM
Below Cutoff: < 0.5 TPM
|
alimentary part of gastrointestinal system |
endocrine system |
nervous system |
reproductive system |
| High |
|
|
|
|
| Medium |
|
|
|
|
| Low |
2
|
|
|
1
|
| Below cutoff |
5
|
1
|
11
|
|
Sequence
| RefSeq Acc Id: |
ENSSSCT00000047145 ⟹ ENSSSCP00000054733 |
| Type: |
CODING |
| Position: |
| Pig Assembly | Chr | Position (strand) | Source |
|---|
Sscrofa11.1 Ensembl | 13 | 51,629,377 - 51,741,546 (-) | Ensembl |
|
| RefSeq Acc Id: |
ENSSSCT00000085600 ⟹ ENSSSCP00000066389 |
| Type: |
CODING |
| Position: |
| Pig Assembly | Chr | Position (strand) | Source |
|---|
Sscrofa11.1 Ensembl | 13 | 51,629,377 - 51,741,546 (-) | Ensembl |
|
| RefSeq Acc Id: |
ENSSSCT00000093865 ⟹ ENSSSCP00000076096 |
| Type: |
CODING |
| Position: |
| Pig Assembly | Chr | Position (strand) | Source |
|---|
Sscrofa11.1 Ensembl | 13 | 51,633,083 - 51,741,546 (-) | Ensembl |
|
| RefSeq Acc Id: |
XM_021069210 ⟹ XP_020924869 |
| Type: |
CODING |
| Position: |
| Pig Assembly | Chr | Position (strand) | Source |
|---|
Sscrofa11.1 | 13 | 51,631,445 - 51,742,570 (-) | NCBI |
|
| Sequence: |
CTTTGAACCCAAATAGCCTCCATATATTTTTCAATCTATGTTTTCTCCATCCTTAAATATTAGT
CGTAAGTGACGAATAGCAGGAAGGGGACTGGAGAAACTCCGTCAATTTGAAAAGAGTTCATTTA
TTTGACTCTGTTTTGCAGAATGTCATTTTAAATAAGCGCTAGCCTGGAAAAGGTTTTTATTGTT
TTGAACCACAGGCTTTATATTACCTTTAGAAAAAAAAAAAAAAAAAAAAAAAACTCTCAGCCGC
AAGTTGGATGCTTCTGGCAGCAAGACAAATCTAGCACCACCCAGGGAGGGAGTGTATTTGCTTC
TTCGCTCACTTCTGGCAGGGCAGAGGAATGCTGGACATCGAGAGACAACAAGGGAGGCTGCCCA
GAGCATCACCACCCTGCTCCTTCATCCCCTGCCTTAGGCCTCCTCCCTTGGGAACACACAGATG
TCAGAAACTGAGCTGGAAAAGATAAAAGTCAGAACAGCTGAGCATTTTGAAAATGATAAAAATA
ACATTTCTTGGTTGAAGGAAGGATTATCCAGCTCAATTCCAAGTCCTCTTGAAGATCCTGATAT
GCAACTCACAAATGAAAAGCAGACAGATGAGAAAGCCATTAATGCTATCGTTATAAATGCAGTG
TCCGAATTCAATATCACAGATGGACCAGCCAAGGAAACCCCCTGTGAGAAAAAACTGTCAGCAT
CCAGCATATCAGTGTCCTCCCTTGAAGAATGCCAAAAGAAATTTTCCTACCTCCAAACTGATAC
TTCCGTTCATCCAAGAGACACCGATGAGGAGTGCGCCTCCCTTATCCTCACCTGTCTGTTTTGC
CAGTTTTTGGATTGTCTCCTAATGCTCCCAGATACTTGTGAGACGGTGTGCACCAACGTGTGCT
GCCCCTCTCACAGGTACCACTACACCTCGGATGAGAGCCATTCCCGGAATGATTGCAACTGCAA
CTGTGACGTGGACTGCAGCCTTTTTGAATCCTGTCATGAGACCAGTGAATGTCTGGAGCTGGCC
ATGGAGATTTCAGAAATCTGTTATCGCTAATGCCACAAAGGAAGCCCCTTCCAGCAGACCTCCT
TGGCCCCAAGGGGAAACTCCTTTACACTAAGACTGTAATTTCCTTGTGCTGAAATGAAAGGACT
GTACACATTTCTTGGATGCCTATAGACCATTTTATTCTGCACCTGTCTGGTAAAGCTAGTATTG
TCAACCCAATGGTCTTAGTCCAAATTTCCCAACCGCATGGCTCGCTGAAAAATAAGATCTTGAT
CACATGTGATGAACAAATCTTAAATACCTCTTAAATGCCATAGGTACAAGATGTTTCTTGACTG
TAAAATAGCATGTGAAACCATTCTGTGGTATTGCACTCATTGGCTTGCATCATGGATTCAAACT
TCATTCACAGATTCAGGACAAATTAGCGCATTCTTTCAGAATTGACATACATTAGCTCGTCTTT
CTAATGGACTCATGCATAAACATGATGCATTGTTGGTTATTATTAATAATGCATTGTATAACAT
CCTTTTGTAATTAAAAATTTATTTATACAGTCTCTTAAAATTCACTTATATGTACAGTTTAGGT
AGGAAAGGGAATTAAATGAATTAGCAACCATGTTCCTGTAATTACAACAGATGTCTCTAAGACA
TAGCCAGTGAATTTTGAATGTGATGTACTTCGAGAGAGTACTGTTAATTTGAGACTATGTTATT
ATATGTCTATGACTATGTCATAACAGGTTATGCATATTCTTAATTTGTTACAGAAAGGCTCTTA
TTTATTCTAATGAGCAGAAATAAGAATAATGTGCAAGTTTCAAGAAAATGACCCCAGATCATCA
ATTCTTCATTTTCCTCATTTCTGTTTGTCAGGTACAAAAGGCAACAGGATATTAAAACAGAACC
ACTTCATTTCACTAAACTATCAGTTGTGGAGGCACCCTGAAGAAACCCATGTCCTGGCACTTAT
GCAGCCCTGAGTTTCCTAATACAGCATGTACTTCAGAAGCCACATTTATTTTCTGATAATTCAA
GTAATTCAAATTATGTTGAGCACTTCTTTATTCTTACAAAAAAAATTTCTGAAGATGTGATACA
AACATAGAAAGCAACTTTCACCTCAAAACAAATTAAATGAGTGAACAATTTATAAGGAAAATAC
ATCTAGATCAAAGTTACTTTGGAATCTTCTTTACTTTCTGTAAGCGTGGCATCACTTACTAGTG
TGTGCTTAAATATTCCCGTGGAAATATCTCACTATATTCATTGAATATAAACAGGCAAAATAGA
TCAATAGCCAAAGAACACAAAAATGAAAGGGAGATTCAAGGGAACTTTTTATGATTTAGGCAAA
TGACAACAACAAATTCCAAAATACCTATCTTTGTGTGACTTTGGTACCTCTGTTGTTTTTTATT
CGTATTTTTATTTTTATGGCATGTGGAAGTTCCTGGGCCAGGGATCAAACTTGTGCCACAGCAG
CAACCCAAGCTGCTGCAATGACAATGCCAGATACTTAACCTGCTGTGTGACAAGAGAACCTCCA
TGGGTTTGGGGGTTGGGGGGGCGGTTTTTGTTTTTGTTTTTTGACTTTGGTACATTTGGACAAA
ACCTGCACTTGTTTTGTTTCTGTAGTGAACTAGCATGTTTTTCTACTCTGCAATAACTTCCTCA
AAACACTGAAAACTACTAATCTTTTGAAAATTTTAAGCTGCCCATAAAAAGGCAATCAACCATT
CATCTTGCTCCTAATAACATAGTGCATCCATAGTTTACACAGGCTTCCTTCCTGTTTGACTGTC
ATACTACCCACAAAGCACAGAGCATGAGAATGGCCATCCCTTATGAAACACCAGCCTCAATGCT
TTTCAGAAGCTCAGAGGCAATTCTAGACTCTCAGCGCAGAATTTGCAGATCTTTAGGGGGAGAA
AAAAGCAAATTCTTAGGAAGGGTGCCTATAGCTCTTCTTACCCAATATTTTCACTTTTCATAAG
AGAAAATAGAGGCTCTCAAGAACTGACTTATCCGGGACCATGTGGTGAATTAATGGCAGTGTGA
GGAGCTTGAATTTGTGGTCTTGTTTTCTAGCTATACTGCACTACCCCAGGATTCTCCACTTCCT
AGTCCAGCTGGTACACAGTGATACAGCTATTCCAACTGTTCAAATATTAAAATACTACCAGACT
GGCTCATAAACAGTTGCTATCATGAACTTCTTTAGTGCTCACCCCACACCTCCAGCCACCTGGC
CCGTCTCCAAGCACCTACCCAACTCCCCATCGTCCAGCCACTAAAGGAGGAACACCTGGACACC
TAGGGGTCTCTGAGATCAACACCATCAACAATATGGTACCTGATGTCATTGATCAGGCCATGCC
ATCTTGGTGTCACATATTTGACCATTCCCTTATTCTTTCTAGTCTACATGCCCTCCAACTGGGC
AAAGATCATGCATTTCAAATGTGAATTGAACGCTGGTCAATTAAAGACGTAAGAGTTGTCAAAT
CATATTTTATAATGTGGTCAGAATACTACAAGCTCTTTCTGTGGCCTCTTTTTCCATGGTTTGT
TAACTTATTCTTCACTTTCAGAATTCACCGTGCTATAACAGAAAGGGTTGGTTATACAAAGTGT
GAAATTTCTTTTCTTTATAACCAATAATAAAACATCATCCTTTTT
hide sequence
|
| RefSeq Acc Id: |
XP_020924869 ⟸ XM_021069210 |
| - UniProtKB: |
A0A287BDX6 (UniProtKB/TrEMBL), A0A4X1V989 (UniProtKB/TrEMBL), A0A4X1VAC5 (UniProtKB/TrEMBL), A0A5G2QWS3 (UniProtKB/TrEMBL), A0A8D1RC77 (UniProtKB/TrEMBL) |
| - Sequence: |
MSETELEKIKVRTAEHFENDKNNISWLKEGLSSSIPSPLEDPDMQLTNEKQTDEKAINAIVINA
VSEFNITDGPAKETPCEKKLSASSISVSSLEECQKKFSYLQTDTSVHPRDTDEECASLILTCLF
CQFLDCLLMLPDTCETVCTNVCCPSHRYHYTSDESHSRNDCNCNCDVDCSLFESCHETSECLEL
AMEISEICYR
hide sequence
|
| RefSeq Acc Id: |
ENSSSCP00000066389 ⟸ ENSSSCT00000085600 |
| RefSeq Acc Id: |
ENSSSCP00000054733 ⟸ ENSSSCT00000047145 |
| RefSeq Acc Id: |
ENSSSCP00000076096 ⟸ ENSSSCT00000093865 |
Additional Information
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