STRN4 (striatin 4) - Rat Genome Database

Name: STRN4
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: STRN4 (striatin 4) Sus scrofa

Analyze

Symbol:

STRN4

Name:

striatin 4

RGD ID:

14241673

Description:

ENCODES a protein that exhibits protein domain specific binding (ortholog); protein-containing complex binding (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2I (ortholog); Walker-Warburg syndrome (ortholog); FOUND IN dendritic spine (ortholog); protein-containing complex (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Also known as:

striatin-4

RGD Orthologs

Human

Mouse

Rat

Chinchilla

Bonobo

Dog

Squirrel

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	STRN4 (striatin 4)	HGNC	EggNOG, Ensembl, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Strn4 (striatin, calmodulin binding protein 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Strn4 (striatin 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Strn4 (striatin 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	STRN4 (striatin 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	STRN4 (striatin 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Strn4 (striatin 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (African green monkey):	STRN4 (striatin 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Strn4 (striatin 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	52,601,934 - 52,627,902 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	52,601,934 - 52,627,910 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	47,922,599 - 47,948,577 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal recessive limb-girdle muscular dystrophy type 2I (ISO)

Walker-Warburg syndrome (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

dendrite (IBA)

dendritic spine (ISO)

FAR/SIN/STRIPAK complex (IEA)

membrane (IEA)

protein-containing complex (ISO)

Molecular Function

armadillo repeat domain binding (IBA)

calmodulin binding (IBA,IEA)

protein binding (ISO)

protein domain specific binding (ISO)

protein phosphatase 2A binding (IBA)

protein-containing complex binding (IBA,ISO)

References

Genomics

Comparative Map Data

STRN4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	52,601,934 - 52,627,902 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	52,601,934 - 52,627,910 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	47,922,599 - 47,948,577 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

STRN4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	19	46,719,511 - 46,746,994 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	19	46,719,509 - 46,746,475 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	19	47,222,768 - 47,249,707 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	51,914,608 - 51,941,560 (-)	NCBI	NCBI36		hg18	NCBI36
Build 34	19	51,914,609 - 51,941,527	NCBI
Celera	19	44,026,298 - 44,053,250 (-)	NCBI
Cytogenetic Map	19	q13.32	NCBI
HuRef	19	43,647,696 - 43,674,467 (-)	NCBI		HuRef
CHM1_1	19	47,224,668 - 47,251,617 (-)	NCBI		CHM1_1

Strn4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	16,549,814 - 16,574,856 (+)	NCBI	GRCm39		mm39
GRCm39 Ensembl	7	16,549,814 - 16,574,856 (+)	Ensembl
GRCm38	7	16,815,889 - 16,840,931 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	16,815,889 - 16,840,931 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	17,401,238 - 17,426,280 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	7	15,974,411 - 15,999,425 (+)	NCBI			mm8
Celera	7	14,013,892 - 14,038,921 (+)	NCBI		Celera
Cytogenetic Map	7	A2	NCBI

Strn4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	1	77,482,267 - 77,511,862 (+)	NCBI
Rnor_6.0 Ensembl	1	78,735,678 - 78,765,692 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0	1	78,739,930 - 78,765,696 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	1	79,983,369 - 80,012,891 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	77,140,308 - 77,166,074 (+)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	1	77,218,418 - 77,244,183 (+)	NCBI
Celera	1	71,971,158 - 71,996,922 (+)	NCBI		Celera
Cytogenetic Map	1	q21	NCBI

Strn4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955574	752,848 - 771,666 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955574	752,848 - 771,664 (-)	NCBI	ChiLan1.0	ChiLan1.0

STRN4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	19	52,240,880 - 52,260,241 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	52,240,880 - 52,260,241 (-)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	19	43,711,834 - 43,738,742 (-)	NCBI	Mhudiblu_PPA_v0		panPan3

STRN4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	1	109,176,983 - 109,202,591 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	1	109,176,955 - 109,203,875 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Strn4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936664	553,682 - 574,240 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

STRN4
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	40,073,924 - 40,100,822 (-)	NCBI
ChlSab1.1 Ensembl	6	40,075,007 - 40,100,885 (-)	Ensembl

Strn4
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624832	6,858,107 - 6,883,514 (+)	NCBI

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium	3	2	1	5	2	11		2	1
Low	7	2	2			12	2	1	2
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003127236	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021094615	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021094616	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021094617	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000041	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FP325211	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01096470	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSSSCT00000003443 ⟹ ENSSSCP00000003360

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	6	52,601,934 - 52,627,902 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000039431 ⟹ ENSSSCP00000038899

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	6	52,601,934 - 52,627,902 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000069470 ⟹ ENSSSCP00000063806

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	6	52,601,934 - 52,627,902 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000077804 ⟹ ENSSSCP00000073875

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	6	52,601,934 - 52,624,523 (-)	Ensembl

RefSeq Acc Id:

XM_003127236 ⟹ XP_003127284

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	6	52,601,934 - 52,627,907 (-)	NCBI

Sequence:

show sequence

CGCGCGGGCCGGCCCCGGGGCCTCCATGATGGAGGAGCGAGCGGCCGCCGCTGCCGCCGCCGCC
GCTTCCTCCAGCCGCCCACTCGGCTCCGGCGCGGGCCCGGGCCCGACGGGGGCGGCTCCGGTCT
CTGCCCCCGCCCCCGGGCCCGGCCCGGCTGCCAAGGGAGGCGGCGGCGGAGGCAGCCCCGGCCC
CACGGCGGGGCCGGAGCCCCTGAGCCTGCCGGGGATCCTACACTTTATCCAGCACGAGTGGGCG
CGCTTCGAAGCGGAGAAGGCCCGCTGGGAGGCGGAGCGCGCCGAGTTACAGGCTCAGGTGGCCT
TCCTCCAGGGAGAAAGGAAGGGGCAAGAGAATCTCAAGACAGACCTGGTGCGGCGGATCAAGAT
GTTAGAATATGCACTGAAGCAGGAGAGGGCCAAATATCATAAATTGAAATTTGGGACAGACCTG
AACCAGGGAGAGAAGAAACCCGAACTGTCAGAACAAGTCTCCAATGGCCCCGTGGAGTCGGTCA
CCCTGGAGAACAGCCCGCTGGTGTGGAAGGAGGGGCGGCAGCTTCTCCGACAGTACCTGGAAGA
GGTGGGCTACACAGACACCATCCTGGACATGCGGTCCAAGCGCGTGCGGTCCCTCCTGGGCCGT
TCGTTGGAGCTCAACGGGGCCGTGGAGCCCAGTGAAGGGGGCCTCAGGACTACACCGGGCCCTG
GGGGACTCAGTGGCGGTGAGTCGCTGCTGGTGAAACAGATCGAGGAGCAGATCAAGAGGAACGC
AGCCGGCAAAGATGGCAAAGAGCGCCTGGGTGGCTCAGTGCTGGAGCAGATCCCCTTCCTGCAG
AACTGCGAGGATGAGGACAGTGACGAGGACGACGAGCTGGACAGCGTGCAGCACAAGAAGCAGC
GGGTGAAGCTGCCGTCCAAGGCCCTGGTACCTGAAATGGAGGATGAAGACGAAGAGGATGACTC
AGAGGATGCCATCAACGAATTTGATTTCCTGGGCTCCGGGGAGGACGGGGAGGGCTCTCCAGAC
CCTCGGCGGTGCGCTGGAGAGGGCACCCACCATGAACTGGAAAGTCGGCGGGTCAAACTCCAGG
GAATTTTGGCCGACCTTCGGGATGTGGATGGGCTGCCCCCCAAAGTGACAGGCCCACCGCCTGG
CACACCCCAGCCCCGGCCACACGAAGGTTCCTTTGGCTTCTCCTCAGACGTTTTCATCATGGAC
ACTATCGGGGGCGGGGAGGTGAGCCTGGGGGACTTGGCAGATCTCACCGTCACCAACGACAACG
ACCTCAGCTGCGATCTGTCTGACAGCAAAGATGCCTTCAAGAAGACCTGGAACCCCAAATTCAC
CCTCCGTTCACACTACGATGGCATCCGCTCCCTGGCTTTCCACCACAGCCAGTCAGCTTTGCTT
ACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGCAGAAGGCGGTCACGGCCAAGAAGA
ATGCTGCGCTAGACGTGGAACCTATCCACGCCTTCCGGGCTCACAGGGGGCCCGTGCTGGCGGT
AGCCATGGGCAGCAGCAGCGAGCACTGTTACAGTGGCGGGGCAGATGCCCGCATCCACAGCTGG
AAGATTCCAGACCTCAACATGGACCCCTACGACGGTTACGACCCAAGTGTGTTGAGCCACGTCC
TGGAGGGCCATGGGGACGCAGTGTGGGGCCTGGCCTTCAGTCCCGCCTCCCAGCGCCTGGCCTC
CTGCTCTGCCGACGGCACGGTCCGCATCTGGGACCCCAGCAGCAGCAGCCCCGGCTGCCTCTGT
ACCTTTCCCACAGCCAGCGATCACGGGATCCCCACCTCAGTGGCCTTCACCAGCACCGAGCCGG
CCCACATCGTGACCTCCTTCCGCTCTGGCGACACTGTCCTGTATGACCTGGAGGCTGGCAGTGC
CCTCCTTACACTGGACTCCCGGGGGAGCAGCGGCCCAACCCAGATCAACCAGGTGGTGAGTCAT
CCAAACCAGCCCCTCACCATCACCGCCCATGACGACAGAGGCATCCGCTTCCTGGACAACCGGA
CAGGGAAATCCGTGCACTCCATGGTTGCCCACCTGGATGCAGTCACCTGCCTAGCCGTGGACCC
CAATGGTGTCTTCCTGATGTCAGGAAGCCATGACTGCTCCCTGCGACTGTGGAGCCTGGACAAT
AAAACGTGCGTTCAGGAGATCACGGCCCACCGCAAGAAGCACGAGGAGGCCATCCACGCTGTCG
CCTGCCACCCTAGCAAGGCCCTCATTGCCAGTGCTGGCGCCGACGCCCTGGCCAAGGTCTTCGT
ATGATGCCCACCCGGCCCCGCCCAGGCCGCCACACTGGCTGCGGAGCGGGCCGGGCAGGTGGGA
CTGAGGTGACTCCCAGCCTCAGTCTGGAGGCCCAGAGGCCTGGAGGCCCGGCTTCTTCCTGCCT
GCCTTGGAGCCTGGTGGTGCTAAGGGCCCTTTCCCCAGGAGGCCCTCCCCACGGCCCTTCCCCG
AGCCTCCAGCCGGGGCGGCAGCCTCCTTCAGGAATCGCCCTCCAGGATGGCCTCTGGGAATTTT
CTCTTCACCCTGACACCCTCTCCGGGTCTCTGAGCTGCCTTCTCGGGGGCCACACAACCAGGGC
TGGGTGTCCTTGGGGATCAGCTTTTCCAAGATGCCAGAAGGTGCCAGGTTCTCTCTTTGAACCC
CTGACCCTCCTCCCCACCTCCATGGACCCAGGTGGGAGTTGTGCTGGGAGGAGCCCGAGTCCCC
CATTCGCTCAGAGGGGGCTGGGGCCGGGCAGCCAGCTGCCGGCAGGGTTGCTGGCAAGACAACC
CCAGAGGCGCGCCCAGCAAACCGCCTCCCCCTCCAGCTTCCTCAGCACAGCTTTCCAGACACTA
CCCATGGCCTCTGGGGCCGGTCACTGCCTGGGGAGCAGGTGATGCCCTCGGGGGAGGTGCCCGC
CCCTACCTCCCCCAACCCTCCTCCAAGGGCAGCTCCCCCAACCCCCATGGGGTCACCCATGGGG
AGAGATGGCCTTCTCTTGCCCCTCCCAGGGGCATGGAGGGTGGAGTGGGGTCCCCCAGTCCCCC
ATAACTCCCTGTATATCTGTATAAATAAATGGGATTTTAATGGAGCCCCACCCCCACCCATGTC
GTTATCACTGTGTGATAGTCTGTCGTCTCTGCTCCTGGCCCTGCCCTTCACGCTCTTCCTCTAT
TTATTTCACTCTTTTTTGGGTTCCACCCTGTGCCCTCAGCCCCCTTCCAGGTTCCTGTTTATAA
GCCCCATCCCTTCTGCCCTGGACTTGTTGTATGTGAAACTTGTCTCAATAAACCCTTTGGAGTA
AGA

hide sequence

RefSeq Acc Id:

XM_021094615 ⟹ XP_020950274

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	6	52,601,934 - 52,627,910 (-)	NCBI

Sequence:

show sequence

GGGCGCGCGGGCCGGCCCCGGGGCCTCCATGATGGAGGAGCGAGCGGCCGCCGCTGCCGCCGCC
GCCGCTTCCTCCAGCCGCCCACTCGGCTCCGGCGCGGGCCCGGGCCCGACGGGGGCGGCTCCGG
TCTCTGCCCCCGCCCCCGGGCCCGGCCCGGCTGCCAAGGGAGGCGGCGGCGGAGGCAGCCCCGG
CCCCACGGCGGGGCCGGAGCCCCTGAGCCTGCCGGGGATCCTACACTTTATCCAGCACGAGTGG
GCGCGCTTCGAAGCGGAGAAGGCCCGCTGGGAGGCGGAGCGCGCCGAGTTACAGGCTCAGGTGG
CCTTCCTCCAGGGAGAAAGGAAGGGGCAAGAGAATCTCAAGACAGACCTGGTGCGGCGGATCAA
GATGTTAGAATATGCACTGAAGCAGGAGAGGGCCAAATATCATAAATTGAAATTTGGGACAGAC
CTGAACCAGGGAGAGAAGAAACCCGAACTGTCAGAACAAGTCTCCAATGGCCCCGTGGAGTCGG
TCACCCTGGAGAACAGCCCGCTGGTGTGGAAGGAGGGGCGGCAGCTTCTCCGACAGTACCTGGA
AGAGGTGGGCTACACAGACACCATCCTGGACATGCGGTCCAAGCGCGTGCGGTCCCTCCTGGGC
CGTTCGTTGGAGCTCAACGGGGCCGTGGAGCCCAGTGAAGGGGGCCTCAGGACTACACCGGGCC
CTGGGGGACTCAGTGGCGGTGAGTCGCTGCTGGTGAAACAGATCGAGGAGCAGATCAAGAGGAA
CGCAGCCGGCAAAGATGGCAAAGAGCGCCTGGGTGGCTCAGTGCTGGAGCAGATCCCCTTCCTG
CAGAACTGCGAGGATGAGGACAGTGACGAGGACGACGAGCTGGACAGCGTGCAGCACAAGAAGC
AGCGGGTGAAGCTGCCGTCCAAGGCCCTGGTACCTGAAATGGAGGATGAAGACGAAGAGGATGA
CTCAGAGGATGCCATCAACGAATTTGATTTCCTGGGCTCCGGGGAGGACGGGGAGGGCTCTCCA
GACCCTCGGCGGTGCGCTGGAGAGGGCACCCACCATGAACTGGAAAGTCGGCGGGTCAAACTCC
AGGGAATTTTGGCCGACCTTCGGGATGTGGATGGGCTGCCCCCCAAAGTGACAGGCCCACCGCC
TGGCACACCCCAGCCCCGGCCACACGAAGGTTCCTTTGGCTTCTCCTCAGACGTTTTCATCATG
GACACTATCGGGGGCGGGGAGGTGAGCCTGGGGGACTTGGCAGATCTCACCGTCACCAACGACA
ACGACCTCAGCTGCGATCTGTCTGACAGCAAAGATGCCTTCAAGAAGACCTGGAACCCCAAATT
CACCCTCCGTTCACACTACGATGGCATCCGCTCCCTGGCTTTCCACCACAGCCAGTCAGCTTTG
CTTACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGCAGAAGGCGGTCACGGCCAAGA
AGAATGCTGCGCTAGACGTGGAACCTATCCACGCCTTCCGGGCTCACAGGGGGCCCGTGCTGGC
GGTAGCCATGGGCAGCAGCAGCGAGCACTGTTACAGTGGCGGGGCAGATGCCCGCATCCACAGC
TGGAAGATTCCAGACCTCAACATGGACCCCTACGACGGTTACGACCCAAGTGTGTTGAGCCACG
TCCTGGAGGGCCATGGGGACGCAGTGTGGGGCCTGGCCTTCAGTCCCGCCTCCCAGCGCCTGGC
CTCCTGCTCTGCCGACGGCACGGTCCGCATCTGGGACCCCAGCAGCAGCAGCCCCGGCTGCCTC
TGTACCTTTCCCACAGCCAGCGATCACGGGATCCCCACCTCAGTGGCCTTCACCAGCACCGAGC
CGGCCCACATCGTGACCTCCTTCCGCTCTGGCGACACTGTCCTGTATGACCTGGAGGCTGGCAG
TGCCCTCCTTACACTGGACTCCCGGGGGAGCAGCGGTAAGCGCCGCTTCTGTGGCTTTGGTGAC
CTGGTGCCCAGTCAGCAGAAGGTGGTGCCCCCCAACGCCCCCCTCGGGGGCTCTGAGTGGGAAG
GAGATGAGGTCCAGTCACTGCCCTTACAGACGCACAGGGCGCTCGGGAGGGCGGAGGAGAGAGA
CCTCGTGAGGGCCTCACCCCTGGGCCACAGTCTTCATGTCCATTGTCCCTGCTCATTGTCCCTG
CTCTTCCCCCAGCAGCTGTGTCCTGTGCACAGAGGGAGCATGGGCTCCCAGGGCAGGGAGCGGC
CAGGCTGCCTGGGGCGCAGGCCTGCCTGGGATTGCGGCTCTCTCCTATCCTTTGCCCTGGTCTC
CCTGATGCCCCCTGCCCTCTTCGCCTCTCCCTTTTTCCTTTCAGGCCCAACCCAGATCAACCAG
GTGGTGAGTCATCCAAACCAGCCCCTCACCATCACCGCCCATGACGACAGAGGCATCCGCTTCC
TGGACAACCGGACAGGGAAATCCGTGCACTCCATGGTTGCCCACCTGGATGCAGTCACCTGCCT
AGCCGTGGACCCCAATGGTGTCTTCCTGATGTCAGGAAGCCATGACTGCTCCCTGCGACTGTGG
AGCCTGGACAATAAAACGTGCGTTCAGGAGATCACGGCCCACCGCAAGAAGCACGAGGAGGCCA
TCCACGCTGTCGCCTGCCACCCTAGCAAGGCCCTCATTGCCAGTGCTGGCGCCGACGCCCTGGC
CAAGGTCTTCGTATGATGCCCACCCGGCCCCGCCCAGGCCGCCACACTGGCTGCGGAGCGGGCC
GGGCAGGTGGGACTGAGGTGACTCCCAGCCTCAGTCTGGAGGCCCAGAGGCCTGGAGGCCCGGC
TTCTTCCTGCCTGCCTTGGAGCCTGGTGGTGCTAAGGGCCCTTTCCCCAGGAGGCCCTCCCCAC
GGCCCTTCCCCGAGCCTCCAGCCGGGGCGGCAGCCTCCTTCAGGAATCGCCCTCCAGGATGGCC
TCTGGGAATTTTCTCTTCACCCTGACACCCTCTCCGGGTCTCTGAGCTGCCTTCTCGGGGGCCA
CACAACCAGGGCTGGGTGTCCTTGGGGATCAGCTTTTCCAAGATGCCAGAAGGTGCCAGGTTCT
CTCTTTGAACCCCTGACCCTCCTCCCCACCTCCATGGACCCAGGTGGGAGTTGTGCTGGGAGGA
GCCCGAGTCCCCCATTCGCTCAGAGGGGGCTGGGGCCGGGCAGCCAGCTGCCGGCAGGGTTGCT
GGCAAGACAACCCCAGAGGCGCGCCCAGCAAACCGCCTCCCCCTCCAGCTTCCTCAGCACAGCT
TTCCAGACACTACCCATGGCCTCTGGGGCCGGTCACTGCCTGGGGAGCAGGTGATGCCCTCGGG
GGAGGTGCCCGCCCCTACCTCCCCCAACCCTCCTCCAAGGGCAGCTCCCCCAACCCCCATGGGG
TCACCCATGGGGAGAGATGGCCTTCTCTTGCCCCTCCCAGGGGCATGGAGGGTGGAGTGGGGTC
CCCCAGTCCCCCATAACTCCCTGTATATCTGTATAAATAAATGGGATTTTAATGGAGCCCCACC
CCCACCCATGTCGTTATCACTGTGTGATAGTCTGTCGTCTCTGCTCCTGGCCCTGCCCTTCACG
CTCTTCCTCTATTTATTTCACTCTTTTTTGGGTTCCACCCTGTGCCCTCAGCCCCCTTCCAGGT
TCCTGTTTATAAGCCCCATCCCTTCTGCCCTGGACTTGTTGTATGTGAAACTTGTCTCAATAAA
CCCTTTGGAGTAAGA

hide sequence

RefSeq Acc Id:

XM_021094616 ⟹ XP_020950275

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	6	52,601,934 - 52,627,909 (-)	NCBI

Sequence:

show sequence

GGCGCGCGGGCCGGCCCCGGGGCCTCCATGATGGAGGAGCGAGCGGCCGCCGCTGCCGCCGCCG
CCGCTTCCTCCAGCCGCCCACTCGGCTCCGGCGCGGGCCCGGGCCCGACGGGGGCGGCTCCGGT
CTCTGCCCCCGCCCCCGGGCCCGGCCCGGCTGCCAAGGGAGGCGGCGGCGGAGGCAGCCCCGGC
CCCACGGCGGGGCCGGAGCCCCTGAGCCTGCCGGGGATCCTACACTTTATCCAGCACGAGTGGG
CGCGCTTCGAAGCGGAGAAGGCCCGCTGGGAGGCGGAGCGCGCCGAGTTACAGGCTCAGGTGGC
CTTCCTCCAGGGAGAAAGGAAGGGGCAAGAGAATCTCAAGACAGACCTGGTGCGGCGGATCAAG
ATGTTAGAATATGCACTGAAGCAGGAGAGGGCCAAATATCATAAATTGAAATTTGGGACAGACC
TGAACCAGGGAGAGAAGAAACCCGAACTGTCAGAACAAGTCTCCAATGGCCCCGTGGAGTCGGT
CACCCTGGAGAACAGCCCGCTGGTGTGGAAGGAGGGGCGGCAGCTTCTCCGACAGTACCTGGAA
GAGGTGGGCTACACAGACACCATCCTGGACATGCGGTCCAAGCGCGTGCGGTCCCTCCTGGGCC
GTTCGTTGGAGCTCAACGGGGCCGTGGAGCCCAGTGAAGGGGGCCTCAGGACTACACCGGGCCC
TGGGGGACTCAGTGGCGGTGAGTCGCTGCTGGTGAAACAGATCGAGGAGCAGATCAAGAGGAAC
GCAGCCGGCAAAGATGGCAAAGAGCGCCTGGGTGGCTCAGTGCTGGAGCAGATCCCCTTCCTGC
AGAACTGCGAGGATGAGGACAGTGACGAGGACGACGAGCTGGACAGCGTGCAGCACAAGAAGCA
GCGGGTGAAGCTGCCGTCCAAGGCCCTGGTACCTGAAATGGAGGATGAAGACGAAGAGGATGAC
TCAGAGGATGCCATCAACGAATTTGATTTCCTGGGCTCCGGGGAGGACGGGGAGGGCTCTCCAG
ACCCTCGGCGGTGCGCTGGAGAGGGCACCCACCATGAACTGGAAAGTCGGCGGGTCAAACTCCA
GGGAATTTTGGCCGACCTTCGGGATGTGGATGGGCTGCCCCCCAAAGTGACAGGCCCACCGCCT
GGCACACCCCAGCCCCGGCCACACGAAGACGTTTTCATCATGGACACTATCGGGGGCGGGGAGG
TGAGCCTGGGGGACTTGGCAGATCTCACCGTCACCAACGACAACGACCTCAGCTGCGATCTGTC
TGACAGCAAAGATGCCTTCAAGAAGACCTGGAACCCCAAATTCACCCTCCGTTCACACTACGAT
GGCATCCGCTCCCTGGCTTTCCACCACAGCCAGTCAGCTTTGCTTACCGCCTCCGAGGACGGCA
CGCTCAAGCTCTGGAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATGCTGCGCTAGACGTGGA
ACCTATCCACGCCTTCCGGGCTCACAGGGGGCCCGTGCTGGCGGTAGCCATGGGCAGCAGCAGC
GAGCACTGTTACAGTGGCGGGGCAGATGCCCGCATCCACAGCTGGAAGATTCCAGACCTCAACA
TGGACCCCTACGACGGTTACGACCCAAGTGTGTTGAGCCACGTCCTGGAGGGCCATGGGGACGC
AGTGTGGGGCCTGGCCTTCAGTCCCGCCTCCCAGCGCCTGGCCTCCTGCTCTGCCGACGGCACG
GTCCGCATCTGGGACCCCAGCAGCAGCAGCCCCGGCTGCCTCTGTACCTTTCCCACAGCCAGCG
ATCACGGGATCCCCACCTCAGTGGCCTTCACCAGCACCGAGCCGGCCCACATCGTGACCTCCTT
CCGCTCTGGCGACACTGTCCTGTATGACCTGGAGGCTGGCAGTGCCCTCCTTACACTGGACTCC
CGGGGGAGCAGCGGTAAGCGCCGCTTCTGTGGCTTTGGTGACCTGGTGCCCAGTCAGCAGAAGG
TGGTGCCCCCCAACGCCCCCCTCGGGGGCTCTGAGTGGGAAGGAGATGAGGTCCAGTCACTGCC
CTTACAGACGCACAGGGCGCTCGGGAGGGCGGAGGAGAGAGACCTCGTGAGGGCCTCACCCCTG
GGCCACAGTCTTCATGTCCATTGTCCCTGCTCATTGTCCCTGCTCTTCCCCCAGCAGCTGTGTC
CTGTGCACAGAGGGAGCATGGGCTCCCAGGGCAGGGAGCGGCCAGGCTGCCTGGGGCGCAGGCC
TGCCTGGGATTGCGGCTCTCTCCTATCCTTTGCCCTGGTCTCCCTGATGCCCCCTGCCCTCTTC
GCCTCTCCCTTTTTCCTTTCAGGCCCAACCCAGATCAACCAGGTGGTGAGTCATCCAAACCAGC
CCCTCACCATCACCGCCCATGACGACAGAGGCATCCGCTTCCTGGACAACCGGACAGGGAAATC
CGTGCACTCCATGGTTGCCCACCTGGATGCAGTCACCTGCCTAGCCGTGGACCCCAATGGTGTC
TTCCTGATGTCAGGAAGCCATGACTGCTCCCTGCGACTGTGGAGCCTGGACAATAAAACGTGCG
TTCAGGAGATCACGGCCCACCGCAAGAAGCACGAGGAGGCCATCCACGCTGTCGCCTGCCACCC
TAGCAAGGCCCTCATTGCCAGTGCTGGCGCCGACGCCCTGGCCAAGGTCTTCGTATGATGCCCA
CCCGGCCCCGCCCAGGCCGCCACACTGGCTGCGGAGCGGGCCGGGCAGGTGGGACTGAGGTGAC
TCCCAGCCTCAGTCTGGAGGCCCAGAGGCCTGGAGGCCCGGCTTCTTCCTGCCTGCCTTGGAGC
CTGGTGGTGCTAAGGGCCCTTTCCCCAGGAGGCCCTCCCCACGGCCCTTCCCCGAGCCTCCAGC
CGGGGCGGCAGCCTCCTTCAGGAATCGCCCTCCAGGATGGCCTCTGGGAATTTTCTCTTCACCC
TGACACCCTCTCCGGGTCTCTGAGCTGCCTTCTCGGGGGCCACACAACCAGGGCTGGGTGTCCT
TGGGGATCAGCTTTTCCAAGATGCCAGAAGGTGCCAGGTTCTCTCTTTGAACCCCTGACCCTCC
TCCCCACCTCCATGGACCCAGGTGGGAGTTGTGCTGGGAGGAGCCCGAGTCCCCCATTCGCTCA
GAGGGGGCTGGGGCCGGGCAGCCAGCTGCCGGCAGGGTTGCTGGCAAGACAACCCCAGAGGCGC
GCCCAGCAAACCGCCTCCCCCTCCAGCTTCCTCAGCACAGCTTTCCAGACACTACCCATGGCCT
CTGGGGCCGGTCACTGCCTGGGGAGCAGGTGATGCCCTCGGGGGAGGTGCCCGCCCCTACCTCC
CCCAACCCTCCTCCAAGGGCAGCTCCCCCAACCCCCATGGGGTCACCCATGGGGAGAGATGGCC
TTCTCTTGCCCCTCCCAGGGGCATGGAGGGTGGAGTGGGGTCCCCCAGTCCCCCATAACTCCCT
GTATATCTGTATAAATAAATGGGATTTTAATGGAGCCCCACCCCCACCCATGTCGTTATCACTG
TGTGATAGTCTGTCGTCTCTGCTCCTGGCCCTGCCCTTCACGCTCTTCCTCTATTTATTTCACT
CTTTTTTGGGTTCCACCCTGTGCCCTCAGCCCCCTTCCAGGTTCCTGTTTATAAGCCCCATCCC
TTCTGCCCTGGACTTGTTGTATGTGAAACTTGTCTCAATAAACCCTTTGGAGTAAGA

hide sequence

RefSeq Acc Id:

XM_021094617 ⟹ XP_020950276

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	6	52,601,934 - 52,627,906 (-)	NCBI

Sequence:

show sequence

GCGCGGGCCGGCCCCGGGGCCTCCATGATGGAGGAGCGAGCGGCCGCCGCTGCCGCCGCCGCCG
CTTCCTCCAGCCGCCCACTCGGCTCCGGCGCGGGCCCGGGCCCGACGGGGGCGGCTCCGGTCTC
TGCCCCCGCCCCCGGGCCCGGCCCGGCTGCCAAGGGAGGCGGCGGCGGAGGCAGCCCCGGCCCC
ACGGCGGGGCCGGAGCCCCTGAGCCTGCCGGGGATCCTACACTTTATCCAGCACGAGTGGGCGC
GCTTCGAAGCGGAGAAGGCCCGCTGGGAGGCGGAGCGCGCCGAGTTACAGGCTCAGGTGGCCTT
CCTCCAGGGAGAAAGGAAGGGGCAAGAGAATCTCAAGACAGACCTGGTGCGGCGGATCAAGATG
TTAGAATATGCACTGAAGCAGGAGAGGGCCAAATATCATAAATTGAAATTTGGGACAGACCTGA
ACCAGGGAGAGAAGAAACCCGAACTGTCAGAACAAGTCTCCAATGGCCCCGTGGAGTCGGTCAC
CCTGGAGAACAGCCCGCTGGTGTGGAAGGAGGGGCGGCAGCTTCTCCGACAGTACCTGGAAGAG
GTGGGCTACACAGACACCATCCTGGACATGCGGTCCAAGCGCGTGCGGTCCCTCCTGGGCCGTT
CGTTGGAGCTCAACGGGGCCGTGGAGCCCAGTGAAGGGGGCCTCAGGACTACACCGGGCCCTGG
GGGACTCAGTGGCGGTGAGTCGCTGCTGGTGAAACAGATCGAGGAGCAGATCAAGAGGAACGCA
GCCGGCAAAGATGGCAAAGAGCGCCTGGGTGGCTCAGTGCTGGAGCAGATCCCCTTCCTGCAGA
ACTGCGAGGATGAGGACAGTGACGAGGACGACGAGCTGGACAGCGTGCAGCACAAGAAGCAGCG
GGTGAAGCTGCCGTCCAAGGCCCTGGTACCTGAAATGGAGGATGAAGACGAAGAGGATGACTCA
GAGGATGCCATCAACGAATTTGATTTCCTGGGCTCCGGGGAGGACGGGGAGGGCTCTCCAGACC
CTCGGCGGTGCGCTGGAGAGGGCACCCACCATGAACTGGAAAGTCGGCGGGTCAAACTCCAGGG
AATTTTGGCCGACCTTCGGGATGTGGATGGGCTGCCCCCCAAAGTGACAGGCCCACCGCCTGGC
ACACCCCAGCCCCGGCCACACGAAGACGTTTTCATCATGGACACTATCGGGGGCGGGGAGGTGA
GCCTGGGGGACTTGGCAGATCTCACCGTCACCAACGACAACGACCTCAGCTGCGATCTGTCTGA
CAGCAAAGATGCCTTCAAGAAGACCTGGAACCCCAAATTCACCCTCCGTTCACACTACGATGGC
ATCCGCTCCCTGGCTTTCCACCACAGCCAGTCAGCTTTGCTTACCGCCTCCGAGGACGGCACGC
TCAAGCTCTGGAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATGCTGCGCTAGACGTGGAACC
TATCCACGCCTTCCGGGCTCACAGGGGGCCCGTGCTGGCGGTAGCCATGGGCAGCAGCAGCGAG
CACTGTTACAGTGGCGGGGCAGATGCCCGCATCCACAGCTGGAAGATTCCAGACCTCAACATGG
ACCCCTACGACGGTTACGACCCAAGTGTGTTGAGCCACGTCCTGGAGGGCCATGGGGACGCAGT
GTGGGGCCTGGCCTTCAGTCCCGCCTCCCAGCGCCTGGCCTCCTGCTCTGCCGACGGCACGGTC
CGCATCTGGGACCCCAGCAGCAGCAGCCCCGGCTGCCTCTGTACCTTTCCCACAGCCAGCGATC
ACGGGATCCCCACCTCAGTGGCCTTCACCAGCACCGAGCCGGCCCACATCGTGACCTCCTTCCG
CTCTGGCGACACTGTCCTGTATGACCTGGAGGCTGGCAGTGCCCTCCTTACACTGGACTCCCGG
GGGAGCAGCGGCCCAACCCAGATCAACCAGGTGGTGAGTCATCCAAACCAGCCCCTCACCATCA
CCGCCCATGACGACAGAGGCATCCGCTTCCTGGACAACCGGACAGGGAAATCCGTGCACTCCAT
GGTTGCCCACCTGGATGCAGTCACCTGCCTAGCCGTGGACCCCAATGGTGTCTTCCTGATGTCA
GGAAGCCATGACTGCTCCCTGCGACTGTGGAGCCTGGACAATAAAACGTGCGTTCAGGAGATCA
CGGCCCACCGCAAGAAGCACGAGGAGGCCATCCACGCTGTCGCCTGCCACCCTAGCAAGGCCCT
CATTGCCAGTGCTGGCGCCGACGCCCTGGCCAAGGTCTTCGTATGATGCCCACCCGGCCCCGCC
CAGGCCGCCACACTGGCTGCGGAGCGGGCCGGGCAGGTGGGACTGAGGTGACTCCCAGCCTCAG
TCTGGAGGCCCAGAGGCCTGGAGGCCCGGCTTCTTCCTGCCTGCCTTGGAGCCTGGTGGTGCTA
AGGGCCCTTTCCCCAGGAGGCCCTCCCCACGGCCCTTCCCCGAGCCTCCAGCCGGGGCGGCAGC
CTCCTTCAGGAATCGCCCTCCAGGATGGCCTCTGGGAATTTTCTCTTCACCCTGACACCCTCTC
CGGGTCTCTGAGCTGCCTTCTCGGGGGCCACACAACCAGGGCTGGGTGTCCTTGGGGATCAGCT
TTTCCAAGATGCCAGAAGGTGCCAGGTTCTCTCTTTGAACCCCTGACCCTCCTCCCCACCTCCA
TGGACCCAGGTGGGAGTTGTGCTGGGAGGAGCCCGAGTCCCCCATTCGCTCAGAGGGGGCTGGG
GCCGGGCAGCCAGCTGCCGGCAGGGTTGCTGGCAAGACAACCCCAGAGGCGCGCCCAGCAAACC
GCCTCCCCCTCCAGCTTCCTCAGCACAGCTTTCCAGACACTACCCATGGCCTCTGGGGCCGGTC
ACTGCCTGGGGAGCAGGTGATGCCCTCGGGGGAGGTGCCCGCCCCTACCTCCCCCAACCCTCCT
CCAAGGGCAGCTCCCCCAACCCCCATGGGGTCACCCATGGGGAGAGATGGCCTTCTCTTGCCCC
TCCCAGGGGCATGGAGGGTGGAGTGGGGTCCCCCAGTCCCCCATAACTCCCTGTATATCTGTAT
AAATAAATGGGATTTTAATGGAGCCCCACCCCCACCCATGTCGTTATCACTGTGTGATAGTCTG
TCGTCTCTGCTCCTGGCCCTGCCCTTCACGCTCTTCCTCTATTTATTTCACTCTTTTTTGGGTT
CCACCCTGTGCCCTCAGCCCCCTTCCAGGTTCCTGTTTATAAGCCCCATCCCTTCTGCCCTGGA
CTTGTTGTATGTGAAACTTGTCTCAATAAACCCTTTGGAGTAAGA

hide sequence

Protein Sequences


Protein RefSeqs	XP_003127284	(Get FASTA)	NCBI Sequence Viewer
	XP_020950274	(Get FASTA)	NCBI Sequence Viewer
	XP_020950275	(Get FASTA)	NCBI Sequence Viewer
	XP_020950276	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

XP_020950274 ⟸ XM_021094615

- Peptide Label:

isoform X1

- Sequence:

show sequence

MMEERAAAAAAAAASSSRPLGSGAGPGPTGAAPVSAPAPGPGPAAKGGGGGGSPGPTAGPEPLS
LPGILHFIQHEWARFEAEKARWEAERAELQAQVAFLQGERKGQENLKTDLVRRIKMLEYALKQE
RAKYHKLKFGTDLNQGEKKPELSEQVSNGPVESVTLENSPLVWKEGRQLLRQYLEEVGYTDTIL
DMRSKRVRSLLGRSLELNGAVEPSEGGLRTTPGPGGLSGGESLLVKQIEEQIKRNAAGKDGKER
LGGSVLEQIPFLQNCEDEDSDEDDELDSVQHKKQRVKLPSKALVPEMEDEDEEDDSEDAINEFD
FLGSGEDGEGSPDPRRCAGEGTHHELESRRVKLQGILADLRDVDGLPPKVTGPPPGTPQPRPHE
GSFGFSSDVFIMDTIGGGEVSLGDLADLTVTNDNDLSCDLSDSKDAFKKTWNPKFTLRSHYDGI
RSLAFHHSQSALLTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAFRAHRGPVLAVAMGSSSEH
CYSGGADARIHSWKIPDLNMDPYDGYDPSVLSHVLEGHGDAVWGLAFSPASQRLASCSADGTVR
IWDPSSSSPGCLCTFPTASDHGIPTSVAFTSTEPAHIVTSFRSGDTVLYDLEAGSALLTLDSRG
SSGKRRFCGFGDLVPSQQKVVPPNAPLGGSEWEGDEVQSLPLQTHRALGRAEERDLVRASPLGH
SLHVHCPCSLSLLFPQQLCPVHRGSMGSQGRERPGCLGRRPAWDCGSLLSFALVSLMPPALFAS
PFFLSGPTQINQVVSHPNQPLTITAHDDRGIRFLDNRTGKSVHSMVAHLDAVTCLAVDPNGVFL
MSGSHDCSLRLWSLDNKTCVQEITAHRKKHEEAIHAVACHPSKALIASAGADALAKVFV

hide sequence

RefSeq Acc Id:

XP_020950275 ⟸ XM_021094616

- Peptide Label:

isoform X2

- Sequence:

show sequence

MMEERAAAAAAAAASSSRPLGSGAGPGPTGAAPVSAPAPGPGPAAKGGGGGGSPGPTAGPEPLS
LPGILHFIQHEWARFEAEKARWEAERAELQAQVAFLQGERKGQENLKTDLVRRIKMLEYALKQE
RAKYHKLKFGTDLNQGEKKPELSEQVSNGPVESVTLENSPLVWKEGRQLLRQYLEEVGYTDTIL
DMRSKRVRSLLGRSLELNGAVEPSEGGLRTTPGPGGLSGGESLLVKQIEEQIKRNAAGKDGKER
LGGSVLEQIPFLQNCEDEDSDEDDELDSVQHKKQRVKLPSKALVPEMEDEDEEDDSEDAINEFD
FLGSGEDGEGSPDPRRCAGEGTHHELESRRVKLQGILADLRDVDGLPPKVTGPPPGTPQPRPHE
DVFIMDTIGGGEVSLGDLADLTVTNDNDLSCDLSDSKDAFKKTWNPKFTLRSHYDGIRSLAFHH
SQSALLTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAFRAHRGPVLAVAMGSSSEHCYSGGAD
ARIHSWKIPDLNMDPYDGYDPSVLSHVLEGHGDAVWGLAFSPASQRLASCSADGTVRIWDPSSS
SPGCLCTFPTASDHGIPTSVAFTSTEPAHIVTSFRSGDTVLYDLEAGSALLTLDSRGSSGKRRF
CGFGDLVPSQQKVVPPNAPLGGSEWEGDEVQSLPLQTHRALGRAEERDLVRASPLGHSLHVHCP
CSLSLLFPQQLCPVHRGSMGSQGRERPGCLGRRPAWDCGSLLSFALVSLMPPALFASPFFLSGP
TQINQVVSHPNQPLTITAHDDRGIRFLDNRTGKSVHSMVAHLDAVTCLAVDPNGVFLMSGSHDC
SLRLWSLDNKTCVQEITAHRKKHEEAIHAVACHPSKALIASAGADALAKVFV

hide sequence

RefSeq Acc Id:	XP_003127284 ⟸ XM_003127236
- Peptide Label:	isoform X3
- UniProtKB:	F1RM09 (UniProtKB/TrEMBL)
- Sequence:	show sequence MMEERAAAAAAAAASSSRPLGSGAGPGPTGAAPVSAPAPGPGPAAKGGGGGGSPGPTAGPEPLS LPGILHFIQHEWARFEAEKARWEAERAELQAQVAFLQGERKGQENLKTDLVRRIKMLEYALKQE RAKYHKLKFGTDLNQGEKKPELSEQVSNGPVESVTLENSPLVWKEGRQLLRQYLEEVGYTDTIL DMRSKRVRSLLGRSLELNGAVEPSEGGLRTTPGPGGLSGGESLLVKQIEEQIKRNAAGKDGKER LGGSVLEQIPFLQNCEDEDSDEDDELDSVQHKKQRVKLPSKALVPEMEDEDEEDDSEDAINEFD FLGSGEDGEGSPDPRRCAGEGTHHELESRRVKLQGILADLRDVDGLPPKVTGPPPGTPQPRPHE GSFGFSSDVFIMDTIGGGEVSLGDLADLTVTNDNDLSCDLSDSKDAFKKTWNPKFTLRSHYDGI RSLAFHHSQSALLTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAFRAHRGPVLAVAMGSSSEH CYSGGADARIHSWKIPDLNMDPYDGYDPSVLSHVLEGHGDAVWGLAFSPASQRLASCSADGTVR IWDPSSSSPGCLCTFPTASDHGIPTSVAFTSTEPAHIVTSFRSGDTVLYDLEAGSALLTLDSRG SSGPTQINQVVSHPNQPLTITAHDDRGIRFLDNRTGKSVHSMVAHLDAVTCLAVDPNGVFLMSG SHDCSLRLWSLDNKTCVQEITAHRKKHEEAIHAVACHPSKALIASAGADALAKVFV hide sequence

RefSeq Acc Id:

XP_020950276 ⟸ XM_021094617

- Peptide Label:

isoform X4

- Sequence:

show sequence

MMEERAAAAAAAAASSSRPLGSGAGPGPTGAAPVSAPAPGPGPAAKGGGGGGSPGPTAGPEPLS
LPGILHFIQHEWARFEAEKARWEAERAELQAQVAFLQGERKGQENLKTDLVRRIKMLEYALKQE
RAKYHKLKFGTDLNQGEKKPELSEQVSNGPVESVTLENSPLVWKEGRQLLRQYLEEVGYTDTIL
DMRSKRVRSLLGRSLELNGAVEPSEGGLRTTPGPGGLSGGESLLVKQIEEQIKRNAAGKDGKER
LGGSVLEQIPFLQNCEDEDSDEDDELDSVQHKKQRVKLPSKALVPEMEDEDEEDDSEDAINEFD
FLGSGEDGEGSPDPRRCAGEGTHHELESRRVKLQGILADLRDVDGLPPKVTGPPPGTPQPRPHE
DVFIMDTIGGGEVSLGDLADLTVTNDNDLSCDLSDSKDAFKKTWNPKFTLRSHYDGIRSLAFHH
SQSALLTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAFRAHRGPVLAVAMGSSSEHCYSGGAD
ARIHSWKIPDLNMDPYDGYDPSVLSHVLEGHGDAVWGLAFSPASQRLASCSADGTVRIWDPSSS
SPGCLCTFPTASDHGIPTSVAFTSTEPAHIVTSFRSGDTVLYDLEAGSALLTLDSRGSSGPTQI
NQVVSHPNQPLTITAHDDRGIRFLDNRTGKSVHSMVAHLDAVTCLAVDPNGVFLMSGSHDCSLR
LWSLDNKTCVQEITAHRKKHEEAIHAVACHPSKALIASAGADALAKVFV

hide sequence

RefSeq Acc Id:

ENSSSCP00000038899 ⟸ ENSSSCT00000039431

RefSeq Acc Id:

ENSSSCP00000063806 ⟸ ENSSSCT00000069470

RefSeq Acc Id:

ENSSSCP00000003360 ⟸ ENSSSCT00000003443

RefSeq Acc Id:

ENSSSCP00000073875 ⟸ ENSSSCT00000077804

Protein Domains

WD_REPEATS_REGION

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000003104	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00070028175	UniProtKB/TrEMBL
Ensembl Protein	ENSSSCP00000003360	ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCP00000038899	ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCP00000063806	ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCP00000073875	UniProtKB/TrEMBL
	ENSSSCP00070048015	UniProtKB/TrEMBL
	ENSSSCP00070048019	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000003443	ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCT00000039431	ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCT00000069470	ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCT00000077804	UniProtKB/TrEMBL
	ENSSSCT00070056519	UniProtKB/TrEMBL
	ENSSSCT00070056523	UniProtKB/TrEMBL
Gene3D-CATH	2.130.10.10	UniProtKB/TrEMBL
InterPro	G-protein_beta_WD-40_rep	UniProtKB/TrEMBL
	Striatin_N	UniProtKB/TrEMBL
	WD40/YVTN_repeat-like_dom_sf	UniProtKB/TrEMBL
	WD40_repeat	UniProtKB/TrEMBL
	WD40_repeat_CS	UniProtKB/TrEMBL
	WD40_repeat_dom	UniProtKB/TrEMBL
	WD40_repeat_dom_sf	UniProtKB/TrEMBL
KEGG Report	ssc:100513929	UniProtKB/TrEMBL
NCBI Gene	STRN4	ENTREZGENE
Pfam	Striatin	UniProtKB/TrEMBL
	WD40	UniProtKB/TrEMBL
PRINTS	GPROTEINBRPT	UniProtKB/TrEMBL
PROSITE	WD_REPEATS_1	UniProtKB/TrEMBL
	WD_REPEATS_2	UniProtKB/TrEMBL
	WD_REPEATS_REGION	UniProtKB/TrEMBL
SMART	WD40	UniProtKB/TrEMBL
Superfamily-SCOP	SSF50978	UniProtKB/TrEMBL
UniProt	A0A287A4V5_PIG	UniProtKB/TrEMBL
	A0A4X1VW91_PIG	UniProtKB/TrEMBL
	A0A4X1W3B3_PIG	UniProtKB/TrEMBL
	A0A5G2QIR8_PIG	UniProtKB/TrEMBL
	A0A5G2RBZ1_PIG	UniProtKB/TrEMBL
	F1RM09	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:93580	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar