LOC100523049 (olfactory receptor 2L2-like) - Rat Genome Database

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Pathways
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Gene: LOC100523049 (olfactory receptor 2L2-like) Sus scrofa
Analyze
No known orthologs.
Symbol: LOC100523049
Name: olfactory receptor 2L2-like
RGD ID: 14237462
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); olfactory receptor activity (inferred); INVOLVED IN detection of chemical stimulus involved in sensory perception of smell (inferred); G protein-coupled receptor signaling pathway (inferred); sensory perception of smell (inferred); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1255,029,570 - 55,030,508 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2255,709,785 - 55,710,723 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
membrane  (IEA)
plasma membrane  (IBA,IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Variants

.
Variants in LOC100523049
116 total Variants

Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003123589 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_003123589   ⟹   XP_003123637
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1255,029,570 - 55,030,508 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: XP_003123637   ⟸   XM_003123589
- UniProtKB: A0A8D1EL40 (UniProtKB/TrEMBL),   A0A287B7M0 (UniProtKB/TrEMBL),   A0A8D1C7U4 (UniProtKB/TrEMBL)
- Sequence:
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000054665 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015015938 UniProtKB/TrEMBL
  ENSSSCG00030038304 UniProtKB/TrEMBL
  ENSSSCG00035075474 UniProtKB/TrEMBL
  ENSSSCG00040039998 UniProtKB/TrEMBL
  ENSSSCG00045015353 UniProtKB/TrEMBL
  ENSSSCG00050012316 UniProtKB/TrEMBL
  ENSSSCG00055019995 UniProtKB/TrEMBL
  ENSSSCG00065025957 UniProtKB/TrEMBL
  ENSSSCG00070012879 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000051395 ENTREZGENE
  ENSSSCT00000051395.3 UniProtKB/TrEMBL
  ENSSSCT00015021126.1 UniProtKB/TrEMBL
  ENSSSCT00030053313.1 UniProtKB/TrEMBL
  ENSSSCT00035102576.1 UniProtKB/TrEMBL
  ENSSSCT00040053479.1 UniProtKB/TrEMBL
  ENSSSCT00045026014.1 UniProtKB/TrEMBL
  ENSSSCT00050016611.1 UniProtKB/TrEMBL
  ENSSSCT00055039144.1 UniProtKB/TrEMBL
  ENSSSCT00065034797.1 UniProtKB/TrEMBL
  ENSSSCT00070025137.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
KEGG Report ssc:100523049 UniProtKB/TrEMBL
NCBI Gene LOC100523049 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A287B7M0 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1TU80_PIG UniProtKB/TrEMBL
  A0A8D1C7U4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1EL40 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1KWC6_PIG UniProtKB/TrEMBL
  A0A8D1RA04_PIG UniProtKB/TrEMBL