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Gene: EMP2 (epithelial membrane protein 2) Sus scrofa

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Symbol:

EMP2

Name:

epithelial membrane protein 2

RGD ID:

14236182

Description:

ENCODES a protein that exhibits integrin binding (inferred); kinase binding (inferred); INVOLVED IN caveola assembly (ortholog); positive regulation of cell-matrix adhesion (ortholog); positive regulation of integrin-mediated signaling pathway (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease type 1C (ortholog); Landau-Kleffner syndrome (ortholog); MHC class II deficiency (ortholog); FOUND IN caveola (ortholog); INTERACTS WITH deoxynivalenol

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	32,450,604 - 32,492,721 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	32,449,496 - 32,493,245 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	33,257,119 - 33,291,408 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Charcot-Marie-Tooth disease type 1C (ISO)

Landau-Kleffner syndrome (ISO)

MHC class II deficiency (ISO)

nephrotic syndrome type 10 (ISO)

placental insufficiency (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

deoxynivalenol (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

actin filament organization (IEA)

actin-mediated cell contraction (IEA)

apoptotic process (IEA)

bleb assembly (IEA)

blood vessel endothelial cell migration (IEA)

caveola assembly (ISO)

cell adhesion (IBA,IEA)

cell-matrix adhesion (IEA)

early endosome to late endosome transport (IEA)

embryo implantation (IEA)

embryonic process involved in female pregnancy (IEA)

heart formation (IEA)

membrane raft assembly (IEA)

natural killer cell proliferation (IEA)

neutrophil migration (IEA)

plasma membrane raft assembly (IEA)

positive regulation of angiogenesis (IEA)

positive regulation of cardiac epithelial to mesenchymal transition (IEA)

positive regulation of cell population proliferation (IEA)

positive regulation of cell-matrix adhesion (IEA,ISO)

positive regulation of integrin-mediated signaling pathway (IBA,IEA,ISO)

protein localization to cell surface (IEA)

protein localization to plasma membrane (IEA)

regulation of angiogenesis (IEA)

regulation of cell-matrix adhesion (IBA,IEA)

regulation of endothelial cell migration (IEA)

regulation of glomerular filtration (IEA)

regulation of kinase activity (ISO)

regulation of vasculogenesis (IEA)

T cell mediated cytotoxicity (IEA)

Cellular Component

apical part of cell (IEA)

apical plasma membrane (IEA)

caveola (ISO)

cell surface (IEA)

cytoplasm (IBA,IEA)

cytoplasmic vesicle (IEA)

Golgi apparatus (IEA)

Golgi membrane (IEA)

membrane (IEA)

membrane raft (IEA)

nucleus (IEA)

perinuclear region of cytoplasm (IEA)

plasma membrane (IBA,IEA)

Molecular Function

integrin binding (IEA)

kinase binding (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:14681463	PMID:17145712	PMID:30032202

Genomics

Comparative Map Data

EMP2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	32,450,604 - 32,492,721 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	32,449,496 - 32,493,245 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	33,257,119 - 33,291,408 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

EMP2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	10,528,422 - 10,580,598 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	10,528,422 - 10,580,632 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	16	10,622,279 - 10,674,455 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	10,533,476 - 10,582,040 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	16	10,533,475 - 10,582,040	NCBI
Celera	16	10,790,221 - 10,843,547 (-)	NCBI		Celera
Cytogenetic Map	16	p13.13	NCBI
HuRef	16	10,541,152 - 10,593,355 (-)	NCBI		HuRef
CHM1_1	16	10,622,208 - 10,674,485 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	16	10,564,353 - 10,616,512 (-)	NCBI		T2T-CHM13v2.0

Emp2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	16	10,099,613 - 10,131,832 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	16	10,099,613 - 10,131,832 (-)	Ensembl		GRCm39 Ensembl
GRCm38	16	10,281,749 - 10,313,968 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	16	10,281,749 - 10,313,968 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	16	10,281,842 - 10,314,061 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	16	10,195,337 - 10,227,546 (-)	NCBI		MGSCv36	mm8
Celera	16	10,915,145 - 10,947,388 (-)	NCBI		Celera
Cytogenetic Map	16	A1	NCBI
cM Map	16	5.54	NCBI

Emp2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	5,866,869 - 5,901,533 (+)	NCBI		GRCr8
mRatBN7.2	10	5,360,073 - 5,394,734 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	5,360,073 - 5,394,733 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	10,056,350 - 10,090,896 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	9,577,512 - 9,612,176 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	5,215,785 - 5,250,323 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	5,433,248 - 5,467,840 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	5,433,248 - 5,467,839 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	4,254,720 - 4,288,863 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	5,311,157 - 5,348,038 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	5,311,156 - 5,348,037 (+)	NCBI
Celera	10	4,376,437 - 4,410,636 (+)	NCBI		Celera
Cytogenetic Map	10	q11	NCBI

Emp2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955442	7,826,738 - 7,860,028 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955442	7,826,967 - 7,862,035 (+)	NCBI	ChiLan1.0	ChiLan1.0

EMP2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	11,072,654 - 11,124,792 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	14,848,582 - 14,900,614 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	16	9,465,589 - 9,517,593 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	16	10,694,425 - 10,744,744 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	10,694,425 - 10,744,744 (-)	Ensembl	panpan1.1		panPan2

EMP2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	32,026,908 - 32,060,447 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	32,026,916 - 32,057,693 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	33,409,027 - 33,443,115 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	32,209,301 - 32,239,471 (+)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	6	32,023,125 - 32,057,265 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	31,897,121 - 31,930,062 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	32,321,409 - 32,355,603 (+)	NCBI		UU_Cfam_GSD_1.0

Emp2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	111,008,817 - 111,016,703 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936530	8,854,203 - 8,862,126 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936530	8,854,266 - 8,862,127 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

EMP2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	10,013,722 - 10,060,880 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	10,014,121 - 10,028,949 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666068	20,100,209 - 20,153,152 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Emp2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624824	7,879,425 - 7,915,472 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624824	7,881,258 - 7,915,010 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in EMP2
1207 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	2	5	14	12	23	3	6	3

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_021086638	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021086639	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021086640	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021086641	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021086642	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK234488	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK347580	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01058920	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000064420 ⟹ ENSSSCP00000037610

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	3	32,450,604 - 32,492,721 (+)	Ensembl

RefSeq Acc Id:

XM_021086638 ⟹ XP_020942297

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	3	32,449,497 - 32,473,903 (+)	NCBI

Sequence:

show sequence

CAGAAAATTTAAGCATGGCTTCTCAGCTAGACCAGCTACTGCACAATAAGTTAGCATTTCTTGA
GAGGATTTCTGATTCTTTTGTTAGTGGCACAAGTCCATTGCCTTATATTTTGGGGTGGGTGCAA
ATAACATTAACATGTTAAATTAAAAGCTTTAAAATATACTGTAATATGCTGTGGTCCTGGTTTG
GAATTTCTTCCCTTTTTCAATACAGTAAATTCTCCTCTTCCTGCACACCCCACCGCTGAGGCTC
AGGCCCCTCTGGCTTTTTCCTGTAGCCTGCAAGAGCCTCCAGCCCAGAGGAACCCTCTCAGTTT
CTAAATGGGGACACTGGGGGCTGGAGAGCAAGACTTGGGGTGGTTTGTCTTTTGATGTTATTTC
CAGGGACAATAAATTCCAGGGTCGTGGTTTCAAAAGATACGGCTGGTGTTTTGTGTGCGGGTGT
GCCTGGGCGGGGGGCATGGGCTGGGCAGACTCTGGTGGAGTCCTAATGGATCCCTGGTTGCCTG
GCCACCTCCCACCAAGGCCAGGGACTCTATGTCAAATAGGAAAAATAACCACAGCTGAGGCTGA
TCGAGCACTTACTATGTACCAGGCACTGCGCGCCTATGACCCTTGCAGGAAATCAGTCCTATCG
TGACTCCCATTTCCAGAGGGGAAACTGAGGTAGGAAAGATTAAGCAGAAGATCCCTAAGTAATG
AAAAGTGCTAGGGAAGGGGTTCTAAAGTAAGGATTCCAGAACCCTGGTCCTTAACCCTTACCCT
GAGAGAAGAGAACTGGGGAGAAGATGCGAAGGAGAAGGGGAAGCTGGAAACTTCCAGAGTGGGC
GCAGCGCAGAGAGCCTTCCAGCTCGGAGGAAGCTCGAAGGAAGGCGGGCTGGGGCTGGGGTCGC
TCCCCGGGCTCCGGCCTTTCTCTCCAGCGGCCCCCACCCGCCTCCCGTGGTTCCTCCCACTCCG
CTTCCCCGCTCCTGACATCACACCCCGGGAGGCGGGATCGGGAAGGAGGGGGGACGTGGGGAGG
AGGCTCGGCGCCACCGAGAGGGAGGAGGGAGGGCGCGCAGTCCCAGCCCAGAGCTTCAAAACAG
CCCGGCGGCCTCGCCTCGCGCCCCAGCCGGTCGGTCCGTCCAGCCGCCAGCGCCCGGCAGAGCA
TCCTCTTGAAACTGACCCAGCCCTTGGAGCCAAGACAGTTCCTTTGCTGCAGAAGTGCCAGTGA
GTGCCTTGGACGCCCGTGTTCTTCCTCCAAAGTCAGCTGTTTCAGCTCTGAGGGTCCAGCACCG
CACGAGGGGCCTTTTCCCTTAACAGCCTGGTCGCAGAGAACAGAACTCAAAGCCAGCCCTCCCC
TGGCCAAAACCACTTTGATTCCCGTGTTTCAGCTTCACAGGGTGGACATGAAGATCCAGCACAA
GACACGCTGTGTAAACGGCAGCCTGACTTTTAATCACCAGGAGTCTCATTTCACGTGGGATGAT
GATTCCTCGGGGCACCCCCACCCCCCTCTCCCAGGATCTGCTTTATCGCATCCCTGTCTTGAGC
ATGCTGGCATCCTGTGCCCTGGTCGCAGTGAGAAGCAGATTTGCTGGTCTTCCTGGAAGAGTGT
CTTCCTTGTCCTGTGATGGCAGCGGCTGCTAAAGCTCCAAAGAACAGAGGAACTGGCTGGAGAG
AGCACACGACAAAGGAAGAGTCTAATCCCAGGCTTGGAACTGAAACTGTGCATTGGGTTCTGCA
ACAGAAATCCTGAAATGATAACACATTTAGAAAGAACTGAAGAAATTGGGGAAATAGATGGAGC
CACAGAGAGGGCAGGGCAAAGGCAACTTTGCCCTTTCCCTTTTAGGGAAAAGAAACGTATGAGA
GAAAAAAATGTAATCACAGTACACTCTGGCTCTGCAGGTACAGCATTTACCTGATCACGGTGTA
CACGGCAACTATTGATGAGAGTGTGACTGGACTGTTTTGGGATGACGGGAGGGGGGAGATGGAG
TGTGATGGTAACGAAACACTCCCCTGGGCAGGAAGTCAGTAGTGTTTACGAGAGATGAATAAGG
AAATAGAAATGTATGAATAAATTGTCTGGACATATGGAACCATGGGAGGGGAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_021086639 ⟹ XP_020942298

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	3	32,449,496 - 32,460,303 (+)	NCBI

Sequence:

show sequence

TCAGAAAATTTAAGCATGGCTTCTCAGCTAGACCAGCTACTGCACAATAAGTTAGCATTTCTTG
AGAGGATTTCTGATTCTTTTGTTAGTGGCACAAGTCCATTGCCTTATATTTTGGGGTGGGTGCA
AATAACATTAACATGTTAAATTAAAAGCTTTAAAATATACTGTAATATGCTGTGGTCCTGGTTT
GGAATTTCTTCCCTTTTTCAATACAGTAAATTCTCCTCTTCCTGCACACCCCACCGCTGAGGCT
CAGGCCCCTCTGGCTTTTTCCTGTAGCCTGCAAGAGCCTCCAGCCCAGAGGAACCCTCTCAGTT
TCTAAATGGGGACACTGGGGGCTGGAGAGCAAGACTTGGGGTGGTTTGTCTTTTGATGTTATTT
CCAGGGACAATAAATTCCAGGGTCGTGGTTTCAAAAGATACGGCTGGTGTTTTGTGTGCGGGTG
TGCCTGGGCGGGGGGCATGGGCTGGGCAGACTCTGGTGGAGTCCTAATGGATCCCTGGTTGCCT
GGCCACCTCCCACCAAGGCCAGGGACTCTATGTCAAATAGGAAAAATAACCACAGCTGAGGCTG
ATCGAGCACTTACTATGTACCAGGCACTGCGCGCCTATGACCCTTGCAGGAAATCAGTCCTATC
GTGACTCCCATTTCCAGAGGGGAAACTGAGGTAGGAAAGATTAAGCAGAAGATCCCTAAGTAAT
GAAAAGTGCTAGGGAAGGGGTTCTAAAGTAAGGATTCCAGAACCCTGGTCCTTAACCCTTACCC
TGAGAGAAGAGAACTGGGGAGAAGATGCGAAGGAGAAGGGGAAGCTGGAAACTTCCAGAGTGGG
CGCAGCGCAGAGAGCCTTCCAGCTCGGAGGAAGCTCGAAGGAAGGCGGGCTGGGGCTGGGGTCG
CTCCCCGGGCTCCGGCCTTTCTCTCCAGCGGCCCCCACCCGCCTCCCGTGGTTCCTCCCACTCC
GCTTCCCCGCTCCTGACATCACACCCCGGGAGGCGGGATCGGGAAGGAGGGGGGACGTGGGGAG
GAGGCTCGGCGCCACCGAGAGGGAGGAGGGAGGGCGCGCAGTCCCAGCCCAGAGCTTCAAAACA
GCCCGGCGGCCTCGCCTCGCGCCCCAGCCGGTCGGTCCGTCCAGCCGCCAGCGCCCGGCAGAGC
ATCCTCTTGAAACTGACCCAGCCCTTGGAGCCAAGACAGTTCCTTTGCTGCAGAAGTGCCAGTG
AGTGCCTTGGACGCCCGTGTTCTTCCTCCAAAGTCAGCTGTTTCAGCTCTGAGGGTCCAGCACC
GCACGAGGGGCCTTTTCCCTTAACAGCCTGGTCGCAGAGAACAGAACTCAAAGCCAGCCCTCCC
CTGGCCAAAACCACTTTGATTCCCGTGTTTCAGGGACCGGATCTGTTGAGCTTGCCCTGGTCCC
TCCTGCATTCAGCACAGAGTTAAGTGCGCAGTAAGTGCTCAACCAATAAAGGGCTGTGTGGGTA
GACGGGAGAGGGCGGCCCCCTGGAGTCTCCGCTTCCCGCTCTTAGCCACGGCCTGGAGGCGTGG
CAGAAGGAGGCCCCGCCCCCCGCGCCTTGGGGGAGGAGCCCGCTGAAGGCGGCAGGGGTGGGGG
CGGGAGGGTAATGGGAGGGGCTTGAGGCGGCTGCTCCCTCCCCCTCTCCTGCAGTTGATTCGGG
CAGGCCGGAGCAGCAGCAGGCCCAAGTGGCACTGTCAGCACCCCTTTATGTCAGAGTGACACGA
GGTCACATTCCTCTAGGCCGAGCCCGAAGGAGGCTTAATCATTGGCAGGCCCAGATCATGGTGT
GCACACCCACAGGCATTTGGAGATGATTTCTATAGCATACAGGCAGGGTTCCAAACTGTAATGT
GCTCATATTTTTTTAAAAAACTGTATTACTAAAATGTCAGTCACTTGGCATATGGTACTACTTT
TCCATTTATGATATAATCTGCATTTAAGCATTCATCGCCTCACGCCGATGTGTTTTAGAGACAC
TTATGGGTAATGAATAGCACAGGTGGTACACAGCCAGGGCAGAAATGATACTGGCGGTGATGCT
GACACCATTGTTGCCCCACCAGGTCCCCTTTCCTGGGTGCTATGCCCACCCCCCTCTGTGGTGA
GGATTTGCTGCTAAGGACTCACAGCTTTCCCTTCTCCTGGAAGTTTCGAGAAGCCTGGAGATGC
CTGGGAAGTCATGCTCCCTATTTCTCGGGCTTGTGGCCCCAGGGATGTCCTGGGGCCTGGCCTA
AATCCACCCCCCAACCCTCCCCCTTGTTGCCCCAGGTTTTCTGCCCTTTCCAGGCAGGGGATGA
TGAGCCTCAGAATATTCATGCTCCTGATTCAGAGCTGGGCACCCCTCTTCCCCCTCTGAGATCC
TCAAGGAGAGAAAGGTGCTCGGCCTTCATCACCTATGAGCCCCTCTCCCTGGACACTCGCAGTC
GTCACCTCCTCTCCTTCCTGGTGGGCACACTGGAGATAGAGCCGTGACCATACTGACATAAGTC
CAGTCTAGAGGGACGAGACAGAAAGAAAAGAAGGGACTAAAGATTAAGAAGAAAAGAGCAGAGT
TCCCTGGTGGCTCAGGGGGTTAAGAATCCAGTGTTGTTGCTACTGTAGCGCAGGTTCAACCCTG
GCCCTGGAACTTCTTCATGCCGTGGGAACGGGCAAAATTTTTAAAAACTAAAAACTAAAAACAA
AAAACAGAAGAAGAAAAGAGCAGATGACGTTGAGTGATTTCAAGAAGATAAAATATGGTCACTT
AGATTGGATGTTCTGGGAGGGCTTCTCTGAGGAGGGGACTGTGGAGTTGAGGCTGAAGGAAGGA
GCCCATCACTCCCAGATCTAAGAACTTTCCAGACAGGGAATGGTTCATGCTGACATCCTGGTGC
CCAGGGTGGGGGCGGGGAGCAAGCTTTGTCCGATGGGGGGGAAGGAAGAGCACTGCTTGGGGTA
CTGACTCATCCAGCAGTTCGTTTGGGTGCTGTGTGGGGTCAAGACTGAGTGGTCCGGAGTTCCT
GTTGTGCTGTAGCTGAAACGGATGCAGCTCGTATCCATGAGGATGCAGGTTCGATCCCTAGCCT
CTCTCAGTGGGTCGGGGATCCGACGTTGCCACGAGCTGGGGTGTAGGT

hide sequence

RefSeq Acc Id:

XM_021086640 ⟹ XP_020942299

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	3	32,450,504 - 32,493,245 (+)	NCBI

Sequence:

show sequence

GGGGGGACGTGGGGAGGAGGCTCGGCGCCACCGAGAGGGAGGAGGGAGGGCGCGCAGTCCCAGC
CCAGAGCTTCAAAACAGCCCGGCGGCCTCGCCTCGCGCCCCAGCCGGTCGGTCCGTCCAGCCGC
CAGCGCCCGATTTGAGTTTCTTTCACCCTCTTTAGCCCCTCCCTCTTTCTGGCCTTCCGACGCT
ACTTGGTGGCCCCACCGTGACCCGTGAAAATGTTGGTGCTTCTGGCTTTCATCATCATCTTCCA
CATCACGTCCGCAGCGTTGCTTTTCGTCGCCACCATCGACAATGCCTGGTGGGTAGGAGAGGAG
TTTTTCGTGGATGTCTGGAGAGTGTGTGTCAACAACACGAATTGTACAGAACTAGATGACACCA
TGCAAGAGTTCTCCACGGTGCAGGCGGTCCAGGCCACCATGATCCTGTCCACCATCCTCTGCTG
CATCGCCTTTCTGATCTTCGTGCTCCAGCTCTTCCGCCTCAAGCAGGGAGAGAGGTTTGTCTTA
ACCTCCATCATCCAGCTCATGTCATGCCTGTGTGTCATGGTTGCAGCTTCCATTTACACAGACC
GGCGCAAAGACATTCACGACGGCAACCCCCAACTGTATGCCTCGACCTTGGACGGCAGCTATGG
CTACTCCTTCATCCTGGCCTGGGTGGCCTTTGCTTTCACCTTCATTAGTGGCCTCATGTACCTG
ATACTGAGGAAGCGCAAATAGAGCCCAGGAGCTGGGTCGCTTTCACTGCAGCACAAAATCCACC
TTCAGATAACCGTTTTGTATATAATCCATTTTTTTTGTGTGTGGTTTTTCTAGCAAACATTGTT
CCTTTTTTTTTTTTTTTTTTGCTTTTTAGGGCTGCACCTGTGGCATATGGAGGTTCCCAGGCTA
GGGGTTGAATCTGAGCTGTAGCCACCGGCCCACACCACAGCCACAGCAATGCCAGATCTGAGCC
GTGTCTGCGACCTATACCACAGCTCACGGCAACGCCGGATCCTTCACCCACAGAGCAGGGCCAG
GGATTGAATGCGCGTCCTCATGGATACCAGTCGGGTTCGTTACCATTGAGCCACAGCAGGAACT
CCAAACACTGTTTCGTTTGAAAGGCAAAAAGAAGTGAAGAGGTTTTGCATTCTTGAGATCAGAG
AACAGACGACGAAGGCTGGAATTCAGAGCTCCCGCCCCGCCGAAAGCCTCTGTACGACAAAGCC
AGAAATCCAGCCATGCTCACGTCCAAAGGTGTTCAGCAAGATCTTTCTTAACCACGGGGATGTC
CTGTGATATGGCAAGAGGCCAAGAAAGCGAGGACTCGGGGGACATCTCCCCCTAGGTTTGGGCC
ACAATCGGCCCCCCTGACGTCAGCTTCCCTTCCCAAATCTCTCAGTAACGGAGGGTGGTGAGGG
GGTCTGGGTGAGGCAGGAAACCTTGGCTGTTTAGCCACGTTCCATTTTAGAAAGAGGTGTAGCC
CCCAGTGTTCTGTCTACATCCAGACCAGACCCCCTAACCCTCCTACAGGTCCAGAAAGTGCCAC
TCAAATTAGCTGTCAGTGTCACCTGCTTGCCTAGGAGAGGTGATCTTTAACCGGGGGGTCAGAT
TTAGGCTCGTCCTCATCTCAACATGTGATCCCTAGAATACTTTGTAAAATGCAAGCTATCGGAG
CCCCTCCCTAGACCTGTAGAATCAGAGTCTTCAGAGTTGGGGCCCAGGAACCTGCATTTCTAAT
AAGCTCCTCAGTGACACCCAGATGCCTTACAGCTGAGGGCCACGGTCCCGGGACCGAGTGAACA
GAGCTGCCTCGTAAATGCTCAAGCTCTTATTGTGTGGAGATGGGGAGATGGTCTAGACCCCACC
GGAGGCCCAAACCTTGCCTCCATCAGCAGTTCGTCCTTCACTGTCTCGTCCACAGCTGCTCACA
TCTGGACCACCCACACACCAGCCCCAGGCCTTGTACTCCCATAGCCAGACACCCTGGGGGGTGC
AGCCTCCATCGTCACCCAACTCAGAAGCCCTCTGCCTTCTAAGGCTGCCTGGCCTCTGCTAACC
ATTTCTGGAGCCTCCGAGGACCACCCATCATTCATCCTTCCGTCCATCCATCCATCCATCAGCA
TAAATCATGGGATGCTTGTGCCGGGCACTGTCGAGACGGTCTCTCTCCCTGAGGGGCTCACCCT
CTAACGGAGGAGACAAATTAAAAGCCAATTAGAAAAATGAATTGTACACAGCGCTGAAGGCTGC
AGAGAACACAACCAAGGATTCAGGAGAGAGGCCCATGGGGTGGGAGGGAGGCTGCTCTATGCCT
GCCTGTTTTTCAAAGCTCCTGGGGGATTTAGACCTGCTGAAATGTCACTCCGCGTAGCCTGTGC
GGAGGCGCCAATGGGGCTGTAGTCTGTCTGTGTTACAGCCAGAGACCACTTCCTCCCTCGGATG
GGCCCGGGGTCCCCACAGTGACCGGGCCGTGGGAGGATCCCCAATGGTCGCGGCATGAGAGCTA
CTTGGGGGATGCCTGCCAGGGTTCAGAGATGGGCTGCCGGCGATTCTGAGCCTCTGGGAAGCTG
GTACTCAACATGGTGAGGTGTGTGGCAGTGTGGTGGCCCCATCAAGTGCCGAAGGAAGAGGCTC
TTTGCAGCTCACCATCCTCTTCCTCGTGTGTGGTGAGCCTGCCGCTGGGAGGTATGCCTGGGAC
CCATCTGTGCATGTCAGCTCTGGCGCCGTGGAAATGACCTGCTCAGTGGAGTGAAGATTTGCCA
TCAGCCTAGTTCCAGGGGAGCTGGGGAAATACCTGGTTCGAGTCACTTTAGGGCCACTGTGGAC
ACTTCTTTAGCTCAGGGTTTAGTTTCCTCTCCATCTGCCTATGCACTCATTCATTCATTCATTC
AGTTTCAACAAGATATTAAGTGCTTACTGCATTCCAAGAACTACGCAGGGCTCTGAAAACACAG
GGACAAGCAAATCCAAACATACTTCTGAGACAGAACCCACTCCCCACAGAGGGGCCACCAGCAC
AGTACAGGGGGACAAGGGGCCAGAGGCTGGACAAATGGTCACCTCCTGCCTCAACGGAAAACTG
TCTTTAGGCAGGTTCTGGGTCACACCTCTGGGGCTGGCAGGATGCTATGCAAGCCTCATGGAGG
AAAGTGGGTCTGGGTTCCCCAAGCTTTCAACTCAGGTGGCTTTCCTATAGTTCCCTTGTAGCCA
CAATGGAAACAAACAAAACCCCTTAGAACCAGAAATCTGGAAAGTCTTATTCCCAAGCCATGTA
TGAATTTCCTTCCCCCAAAAGCTTCAGAATGGGTATCTGAAATGATCTGGCTGGTCTCCACTGG
TGTATAGCACTCAGTGCCCACATGTATCTGCGATGCCAAGGTTTTGTGAAACAGGAGAGCTGCC
TTTTCCCCCATGTCATGACGTGCCCCAGAGAAGTGGGAAAGAGGCGACGGCATGAGTGAGAAAA
TACCCAGTCTTCTAAACCCCATCTGTAGATTCAGCCCTCGCTTGGTGCTTTTGACTGGTGATTC
AAGAACAACAACAAAGAAGATTAGCTGAGACATCCTAGAAGCAGCTATTAGGACCAAATATATT
ACTGGTAACAACTGCCTTTGAGGGAACTGTAGTTTGCATATTTTAGGACATTTTTATAAAGTAC
TGTAATTCTTTCATGGAGGGGCTATGGATGGAGACAGACTAACTCATTTTGTTACTTGCATTAA
AATTACTTTGGGACTCTGTTCAAGTGAGTTTGGAGAAGGCTTGATTTGTTGCTTGGCATGGATG
TAAATACTCATACCTGAATATGGGAGACTTGGAGACGCCCCCCCGGCCCCACACTGTCTGCTAT
GGGTTGTGCACCTGTGCGTATCCCTAATCACAGGATGAAGTCCTAGGATGCTCTGTATTTGCTG
ATGGTGAAGAAACCTAGACCCCCAAGCCCACACATAAGCACACTAAGCATGGTAGCTTGAATAG
AAGCTGTAGCATCATTTAAAATCTGCCTGGGTGGGAATTACTAAACTCGCTAATAGTTGAAAGG
TGACTTACAATACAGGAGGTTGGCTAGTTTCATATATTAGGGGGCGGTGGTGGTGCGAGGAAGG
GCCTAGAGGCAAAGTTTGAATCTTGTTTTGGGGACAAATGTGATCTTAGAGTAGTTAGAGACTT
TCTACTTAATGTGCCTTTAAAGTAGTCCATTTTCTATGTTTTGTATAATCTGAAACTGTACATT
GAAAAATAAAGTTTAAAACCAAATTGCCCAGA

hide sequence

RefSeq Acc Id:

XM_021086641 ⟹ XP_020942300

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	3	32,450,510 - 32,493,245 (+)	NCBI

Sequence:

show sequence

ACGTGGGGAGGAGGCTCGGCGCCACCGAGAGGGAGGAGGGAGGGCGCGCAGTCCCAGCCCAGAG
CTTCAAAACAGCCCGGCGGCCTCGCCTCGCGCCCCAGCCGGTCGGTCCGTCCAGCCGCCAGCGC
CCGGCAGAGCATCCTCTTGAAACTGACCCAGCCCTTGGAGCCAAGACAGTTCCTTTGCTGCAGA
AGTGCCAGTGAGTGCCTTGGACGCCCGTGTTCTTCCTCCAAAGTCAGCTGTTTCAGCTCTGAGG
GTCCAGCACCGCACGAGGGGCCTTTTCCCTTAACAGCCTGGTCGCAGAGAACAGAACTCAAAGC
CAGCCCTCCCCTGGCCAAAACCACTTTGATTCCCGTGTTTCAGATTTGAGTTTCTTTCACCCTC
TTTAGCCCCTCCCTCTTTCTGGCCTTCCGACGCTACTTGGTGGCCCCACCGTGACCCGTGAAAA
TGTTGGTGCTTCTGGCTTTCATCATCATCTTCCACATCACGTCCGCAGCGTTGCTTTTCGTCGC
CACCATCGACAATGCCTGGTGGGTAGGAGAGGAGTTTTTCGTGGATGTCTGGAGAGTGTGTGTC
AACAACACGAATTGTACAGAACTAGATGACACCATGCAAGAGTTCTCCACGGTGCAGGCGGTCC
AGGCCACCATGATCCTGTCCACCATCCTCTGCTGCATCGCCTTTCTGATCTTCGTGCTCCAGCT
CTTCCGCCTCAAGCAGGGAGAGAGGTTTGTCTTAACCTCCATCATCCAGCTCATGTCATGCCTG
TGTGTCATGGTTGCAGCTTCCATTTACACAGACCGGCGCAAAGACATTCACGACGGCAACCCCC
AACTGTATGCCTCGACCTTGGACGGCAGCTATGGCTACTCCTTCATCCTGGCCTGGGTGGCCTT
TGCTTTCACCTTCATTAGTGGCCTCATGTACCTGATACTGAGGAAGCGCAAATAGAGCCCAGGA
GCTGGGTCGCTTTCACTGCAGCACAAAATCCACCTTCAGATAACCGTTTTGTATATAATCCATT
TTTTTTGTGTGTGGTTTTTCTAGCAAACATTGTTCCTTTTTTTTTTTTTTTTTTGCTTTTTAGG
GCTGCACCTGTGGCATATGGAGGTTCCCAGGCTAGGGGTTGAATCTGAGCTGTAGCCACCGGCC
CACACCACAGCCACAGCAATGCCAGATCTGAGCCGTGTCTGCGACCTATACCACAGCTCACGGC
AACGCCGGATCCTTCACCCACAGAGCAGGGCCAGGGATTGAATGCGCGTCCTCATGGATACCAG
TCGGGTTCGTTACCATTGAGCCACAGCAGGAACTCCAAACACTGTTTCGTTTGAAAGGCAAAAA
GAAGTGAAGAGGTTTTGCATTCTTGAGATCAGAGAACAGACGACGAAGGCTGGAATTCAGAGCT
CCCGCCCCGCCGAAAGCCTCTGTACGACAAAGCCAGAAATCCAGCCATGCTCACGTCCAAAGGT
GTTCAGCAAGATCTTTCTTAACCACGGGGATGTCCTGTGATATGGCAAGAGGCCAAGAAAGCGA
GGACTCGGGGGACATCTCCCCCTAGGTTTGGGCCACAATCGGCCCCCCTGACGTCAGCTTCCCT
TCCCAAATCTCTCAGTAACGGAGGGTGGTGAGGGGGTCTGGGTGAGGCAGGAAACCTTGGCTGT
TTAGCCACGTTCCATTTTAGAAAGAGGTGTAGCCCCCAGTGTTCTGTCTACATCCAGACCAGAC
CCCCTAACCCTCCTACAGGTCCAGAAAGTGCCACTCAAATTAGCTGTCAGTGTCACCTGCTTGC
CTAGGAGAGGTGATCTTTAACCGGGGGGTCAGATTTAGGCTCGTCCTCATCTCAACATGTGATC
CCTAGAATACTTTGTAAAATGCAAGCTATCGGAGCCCCTCCCTAGACCTGTAGAATCAGAGTCT
TCAGAGTTGGGGCCCAGGAACCTGCATTTCTAATAAGCTCCTCAGTGACACCCAGATGCCTTAC
AGCTGAGGGCCACGGTCCCGGGACCGAGTGAACAGAGCTGCCTCGTAAATGCTCAAGCTCTTAT
TGTGTGGAGATGGGGAGATGGTCTAGACCCCACCGGAGGCCCAAACCTTGCCTCCATCAGCAGT
TCGTCCTTCACTGTCTCGTCCACAGCTGCTCACATCTGGACCACCCACACACCAGCCCCAGGCC
TTGTACTCCCATAGCCAGACACCCTGGGGGGTGCAGCCTCCATCGTCACCCAACTCAGAAGCCC
TCTGCCTTCTAAGGCTGCCTGGCCTCTGCTAACCATTTCTGGAGCCTCCGAGGACCACCCATCA
TTCATCCTTCCGTCCATCCATCCATCCATCAGCATAAATCATGGGATGCTTGTGCCGGGCACTG
TCGAGACGGTCTCTCTCCCTGAGGGGCTCACCCTCTAACGGAGGAGACAAATTAAAAGCCAATT
AGAAAAATGAATTGTACACAGCGCTGAAGGCTGCAGAGAACACAACCAAGGATTCAGGAGAGAG
GCCCATGGGGTGGGAGGGAGGCTGCTCTATGCCTGCCTGTTTTTCAAAGCTCCTGGGGGATTTA
GACCTGCTGAAATGTCACTCCGCGTAGCCTGTGCGGAGGCGCCAATGGGGCTGTAGTCTGTCTG
TGTTACAGCCAGAGACCACTTCCTCCCTCGGATGGGCCCGGGGTCCCCACAGTGACCGGGCCGT
GGGAGGATCCCCAATGGTCGCGGCATGAGAGCTACTTGGGGGATGCCTGCCAGGGTTCAGAGAT
GGGCTGCCGGCGATTCTGAGCCTCTGGGAAGCTGGTACTCAACATGGTGAGGTGTGTGGCAGTG
TGGTGGCCCCATCAAGTGCCGAAGGAAGAGGCTCTTTGCAGCTCACCATCCTCTTCCTCGTGTG
TGGTGAGCCTGCCGCTGGGAGGTATGCCTGGGACCCATCTGTGCATGTCAGCTCTGGCGCCGTG
GAAATGACCTGCTCAGTGGAGTGAAGATTTGCCATCAGCCTAGTTCCAGGGGAGCTGGGGAAAT
ACCTGGTTCGAGTCACTTTAGGGCCACTGTGGACACTTCTTTAGCTCAGGGTTTAGTTTCCTCT
CCATCTGCCTATGCACTCATTCATTCATTCATTCAGTTTCAACAAGATATTAAGTGCTTACTGC
ATTCCAAGAACTACGCAGGGCTCTGAAAACACAGGGACAAGCAAATCCAAACATACTTCTGAGA
CAGAACCCACTCCCCACAGAGGGGCCACCAGCACAGTACAGGGGGACAAGGGGCCAGAGGCTGG
ACAAATGGTCACCTCCTGCCTCAACGGAAAACTGTCTTTAGGCAGGTTCTGGGTCACACCTCTG
GGGCTGGCAGGATGCTATGCAAGCCTCATGGAGGAAAGTGGGTCTGGGTTCCCCAAGCTTTCAA
CTCAGGTGGCTTTCCTATAGTTCCCTTGTAGCCACAATGGAAACAAACAAAACCCCTTAGAACC
AGAAATCTGGAAAGTCTTATTCCCAAGCCATGTATGAATTTCCTTCCCCCAAAAGCTTCAGAAT
GGGTATCTGAAATGATCTGGCTGGTCTCCACTGGTGTATAGCACTCAGTGCCCACATGTATCTG
CGATGCCAAGGTTTTGTGAAACAGGAGAGCTGCCTTTTCCCCCATGTCATGACGTGCCCCAGAG
AAGTGGGAAAGAGGCGACGGCATGAGTGAGAAAATACCCAGTCTTCTAAACCCCATCTGTAGAT
TCAGCCCTCGCTTGGTGCTTTTGACTGGTGATTCAAGAACAACAACAAAGAAGATTAGCTGAGA
CATCCTAGAAGCAGCTATTAGGACCAAATATATTACTGGTAACAACTGCCTTTGAGGGAACTGT
AGTTTGCATATTTTAGGACATTTTTATAAAGTACTGTAATTCTTTCATGGAGGGGCTATGGATG
GAGACAGACTAACTCATTTTGTTACTTGCATTAAAATTACTTTGGGACTCTGTTCAAGTGAGTT
TGGAGAAGGCTTGATTTGTTGCTTGGCATGGATGTAAATACTCATACCTGAATATGGGAGACTT
GGAGACGCCCCCCCGGCCCCACACTGTCTGCTATGGGTTGTGCACCTGTGCGTATCCCTAATCA
CAGGATGAAGTCCTAGGATGCTCTGTATTTGCTGATGGTGAAGAAACCTAGACCCCCAAGCCCA
CACATAAGCACACTAAGCATGGTAGCTTGAATAGAAGCTGTAGCATCATTTAAAATCTGCCTGG
GTGGGAATTACTAAACTCGCTAATAGTTGAAAGGTGACTTACAATACAGGAGGTTGGCTAGTTT
CATATATTAGGGGGCGGTGGTGGTGCGAGGAAGGGCCTAGAGGCAAAGTTTGAATCTTGTTTTG
GGGACAAATGTGATCTTAGAGTAGTTAGAGACTTTCTACTTAATGTGCCTTTAAAGTAGTCCAT
TTTCTATGTTTTGTATAATCTGAAACTGTACATTGAAAAATAAAGTTTAAAACCAAATTGCCCA
GA

hide sequence

RefSeq Acc Id:

XM_021086642 ⟹ XP_020942301

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	3	32,450,502 - 32,493,245 (+)	NCBI

Sequence:

show sequence

GAGGGGGGACGTGGGGAGGAGGCTCGGCGCCACCGAGAGGGAGGAGGGAGGGCGCGCAGTCCCA
GCCCAGAGCTTCAAAACAGCCCGGCGGCCTCGCCTCGCGCCCCAGCCGGTCGGTCCGTCCAGCC
GCCAGCGCCCGCCCCTCCCTCTTTCTGGCCTTCCGACGCTACTTGGTGGCCCCACCGTGACCCG
TGAAAATGTTGGTGCTTCTGGCTTTCATCATCATCTTCCACATCACGTCCGCAGCGTTGCTTTT
CGTCGCCACCATCGACAATGCCTGGTGGGTAGGAGAGGAGTTTTTCGTGGATGTCTGGAGAGTG
TGTGTCAACAACACGAATTGTACAGAACTAGATGACACCATGCAAGAGTTCTCCACGGTGCAGG
CGGTCCAGGCCACCATGATCCTGTCCACCATCCTCTGCTGCATCGCCTTTCTGATCTTCGTGCT
CCAGCTCTTCCGCCTCAAGCAGGGAGAGAGGTTTGTCTTAACCTCCATCATCCAGCTCATGTCA
TGCCTGTGTGTCATGGTTGCAGCTTCCATTTACACAGACCGGCGCAAAGACATTCACGACGGCA
ACCCCCAACTGTATGCCTCGACCTTGGACGGCAGCTATGGCTACTCCTTCATCCTGGCCTGGGT
GGCCTTTGCTTTCACCTTCATTAGTGGCCTCATGTACCTGATACTGAGGAAGCGCAAATAGAGC
CCAGGAGCTGGGTCGCTTTCACTGCAGCACAAAATCCACCTTCAGATAACCGTTTTGTATATAA
TCCATTTTTTTTGTGTGTGGTTTTTCTAGCAAACATTGTTCCTTTTTTTTTTTTTTTTTTGCTT
TTTAGGGCTGCACCTGTGGCATATGGAGGTTCCCAGGCTAGGGGTTGAATCTGAGCTGTAGCCA
CCGGCCCACACCACAGCCACAGCAATGCCAGATCTGAGCCGTGTCTGCGACCTATACCACAGCT
CACGGCAACGCCGGATCCTTCACCCACAGAGCAGGGCCAGGGATTGAATGCGCGTCCTCATGGA
TACCAGTCGGGTTCGTTACCATTGAGCCACAGCAGGAACTCCAAACACTGTTTCGTTTGAAAGG
CAAAAAGAAGTGAAGAGGTTTTGCATTCTTGAGATCAGAGAACAGACGACGAAGGCTGGAATTC
AGAGCTCCCGCCCCGCCGAAAGCCTCTGTACGACAAAGCCAGAAATCCAGCCATGCTCACGTCC
AAAGGTGTTCAGCAAGATCTTTCTTAACCACGGGGATGTCCTGTGATATGGCAAGAGGCCAAGA
AAGCGAGGACTCGGGGGACATCTCCCCCTAGGTTTGGGCCACAATCGGCCCCCCTGACGTCAGC
TTCCCTTCCCAAATCTCTCAGTAACGGAGGGTGGTGAGGGGGTCTGGGTGAGGCAGGAAACCTT
GGCTGTTTAGCCACGTTCCATTTTAGAAAGAGGTGTAGCCCCCAGTGTTCTGTCTACATCCAGA
CCAGACCCCCTAACCCTCCTACAGGTCCAGAAAGTGCCACTCAAATTAGCTGTCAGTGTCACCT
GCTTGCCTAGGAGAGGTGATCTTTAACCGGGGGGTCAGATTTAGGCTCGTCCTCATCTCAACAT
GTGATCCCTAGAATACTTTGTAAAATGCAAGCTATCGGAGCCCCTCCCTAGACCTGTAGAATCA
GAGTCTTCAGAGTTGGGGCCCAGGAACCTGCATTTCTAATAAGCTCCTCAGTGACACCCAGATG
CCTTACAGCTGAGGGCCACGGTCCCGGGACCGAGTGAACAGAGCTGCCTCGTAAATGCTCAAGC
TCTTATTGTGTGGAGATGGGGAGATGGTCTAGACCCCACCGGAGGCCCAAACCTTGCCTCCATC
AGCAGTTCGTCCTTCACTGTCTCGTCCACAGCTGCTCACATCTGGACCACCCACACACCAGCCC
CAGGCCTTGTACTCCCATAGCCAGACACCCTGGGGGGTGCAGCCTCCATCGTCACCCAACTCAG
AAGCCCTCTGCCTTCTAAGGCTGCCTGGCCTCTGCTAACCATTTCTGGAGCCTCCGAGGACCAC
CCATCATTCATCCTTCCGTCCATCCATCCATCCATCAGCATAAATCATGGGATGCTTGTGCCGG
GCACTGTCGAGACGGTCTCTCTCCCTGAGGGGCTCACCCTCTAACGGAGGAGACAAATTAAAAG
CCAATTAGAAAAATGAATTGTACACAGCGCTGAAGGCTGCAGAGAACACAACCAAGGATTCAGG
AGAGAGGCCCATGGGGTGGGAGGGAGGCTGCTCTATGCCTGCCTGTTTTTCAAAGCTCCTGGGG
GATTTAGACCTGCTGAAATGTCACTCCGCGTAGCCTGTGCGGAGGCGCCAATGGGGCTGTAGTC
TGTCTGTGTTACAGCCAGAGACCACTTCCTCCCTCGGATGGGCCCGGGGTCCCCACAGTGACCG
GGCCGTGGGAGGATCCCCAATGGTCGCGGCATGAGAGCTACTTGGGGGATGCCTGCCAGGGTTC
AGAGATGGGCTGCCGGCGATTCTGAGCCTCTGGGAAGCTGGTACTCAACATGGTGAGGTGTGTG
GCAGTGTGGTGGCCCCATCAAGTGCCGAAGGAAGAGGCTCTTTGCAGCTCACCATCCTCTTCCT
CGTGTGTGGTGAGCCTGCCGCTGGGAGGTATGCCTGGGACCCATCTGTGCATGTCAGCTCTGGC
GCCGTGGAAATGACCTGCTCAGTGGAGTGAAGATTTGCCATCAGCCTAGTTCCAGGGGAGCTGG
GGAAATACCTGGTTCGAGTCACTTTAGGGCCACTGTGGACACTTCTTTAGCTCAGGGTTTAGTT
TCCTCTCCATCTGCCTATGCACTCATTCATTCATTCATTCAGTTTCAACAAGATATTAAGTGCT
TACTGCATTCCAAGAACTACGCAGGGCTCTGAAAACACAGGGACAAGCAAATCCAAACATACTT
CTGAGACAGAACCCACTCCCCACAGAGGGGCCACCAGCACAGTACAGGGGGACAAGGGGCCAGA
GGCTGGACAAATGGTCACCTCCTGCCTCAACGGAAAACTGTCTTTAGGCAGGTTCTGGGTCACA
CCTCTGGGGCTGGCAGGATGCTATGCAAGCCTCATGGAGGAAAGTGGGTCTGGGTTCCCCAAGC
TTTCAACTCAGGTGGCTTTCCTATAGTTCCCTTGTAGCCACAATGGAAACAAACAAAACCCCTT
AGAACCAGAAATCTGGAAAGTCTTATTCCCAAGCCATGTATGAATTTCCTTCCCCCAAAAGCTT
CAGAATGGGTATCTGAAATGATCTGGCTGGTCTCCACTGGTGTATAGCACTCAGTGCCCACATG
TATCTGCGATGCCAAGGTTTTGTGAAACAGGAGAGCTGCCTTTTCCCCCATGTCATGACGTGCC
CCAGAGAAGTGGGAAAGAGGCGACGGCATGAGTGAGAAAATACCCAGTCTTCTAAACCCCATCT
GTAGATTCAGCCCTCGCTTGGTGCTTTTGACTGGTGATTCAAGAACAACAACAAAGAAGATTAG
CTGAGACATCCTAGAAGCAGCTATTAGGACCAAATATATTACTGGTAACAACTGCCTTTGAGGG
AACTGTAGTTTGCATATTTTAGGACATTTTTATAAAGTACTGTAATTCTTTCATGGAGGGGCTA
TGGATGGAGACAGACTAACTCATTTTGTTACTTGCATTAAAATTACTTTGGGACTCTGTTCAAG
TGAGTTTGGAGAAGGCTTGATTTGTTGCTTGGCATGGATGTAAATACTCATACCTGAATATGGG
AGACTTGGAGACGCCCCCCCGGCCCCACACTGTCTGCTATGGGTTGTGCACCTGTGCGTATCCC
TAATCACAGGATGAAGTCCTAGGATGCTCTGTATTTGCTGATGGTGAAGAAACCTAGACCCCCA
AGCCCACACATAAGCACACTAAGCATGGTAGCTTGAATAGAAGCTGTAGCATCATTTAAAATCT
GCCTGGGTGGGAATTACTAAACTCGCTAATAGTTGAAAGGTGACTTACAATACAGGAGGTTGGC
TAGTTTCATATATTAGGGGGCGGTGGTGGTGCGAGGAAGGGCCTAGAGGCAAAGTTTGAATCTT
GTTTTGGGGACAAATGTGATCTTAGAGTAGTTAGAGACTTTCTACTTAATGTGCCTTTAAAGTA
GTCCATTTTCTATGTTTTGTATAATCTGAAACTGTACATTGAAAAATAAAGTTTAAAACCAAAT
TGCCCAGA

hide sequence

Protein Sequences


Protein RefSeqs	XP_020942297	(Get FASTA)	NCBI Sequence Viewer
	XP_020942298	(Get FASTA)	NCBI Sequence Viewer
	XP_020942299	(Get FASTA)	NCBI Sequence Viewer
	XP_020942300	(Get FASTA)	NCBI Sequence Viewer
	XP_020942301	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000037610
	ENSSSCP00000037610.1
	ENSSSCP00015026171.1
	ENSSSCP00025030183.1
	ENSSSCP00030018574.1
	ENSSSCP00035037821.1
	ENSSSCP00040005581.1
	ENSSSCP00045000853.1
	ENSSSCP00050028897.1
	ENSSSCP00060042819.1
	ENSSSCP00065047036.1
	ENSSSCP00070043950.1
	ENSSSCP00070043951.1

RefSeq Acc Id:

XP_020942298 ⟸ XM_021086639

- Peptide Label:

isoform X2

- Sequence:

show sequence

MRRRRGSWKLPEWAQRREPSSSEEARRKAGWGWGRSPGSGLSLQRPPPASRGSSHSASPLLTSH
PGRRDREGGGTWGGGSAPPRGRREGAQSQPRASKQPGGLASRPSRSVRPAASARQSILLKLTQP
LEPRQFLCCRSASECLGRPCSSSKVSCFSSEGPAPHEGPFPLTAWSQRTELKASPPLAKTTLIP
VFQGPDLLSLPWSLLHSAQS

hide sequence

RefSeq Acc Id:

XP_020942297 ⟸ XM_021086638

- Peptide Label:

isoform X1

- Sequence:

show sequence

MRRRRGSWKLPEWAQRREPSSSEEARRKAGWGWGRSPGSGLSLQRPPPASRGSSHSASPLLTSH
PGRRDREGGGTWGGGSAPPRGRREGAQSQPRASKQPGGLASRPSRSVRPAASARQSILLKLTQP
LEPRQFLCCRSASECLGRPCSSSKVSCFSSEGPAPHEGPFPLTAWSQRTELKASPPLAKTTLIP
VFQLHRVDMKIQHKTRCVNGSLTFNHQESHFTWDDDSSGHPHPPLPGSALSHPCLEHAGILCPG
RSEKQICWSSWKSVFLVL

hide sequence

RefSeq Acc Id:	XP_020942301 ⟸ XM_021086642
- Peptide Label:	isoform X3
- UniProtKB:	A0A287A649 (UniProtKB/TrEMBL), A0A4X1VS33 (UniProtKB/TrEMBL), A0A8D0P0D7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLVLLAFIIIFHITSAALLFVATIDNAWWVGEEFFVDVWRVCVNNTNCTELDDTMQEFSTVQAV QATMILSTILCCIAFLIFVLQLFRLKQGERFVLTSIIQLMSCLCVMVAASIYTDRRKDIHDGNP QLYASTLDGSYGYSFILAWVAFAFTFISGLMYLILRKRK hide sequence

RefSeq Acc Id:	XP_020942299 ⟸ XM_021086640
- Peptide Label:	isoform X3
- UniProtKB:	A0A287A649 (UniProtKB/TrEMBL), A0A4X1VS33 (UniProtKB/TrEMBL), A0A8D0P0D7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLVLLAFIIIFHITSAALLFVATIDNAWWVGEEFFVDVWRVCVNNTNCTELDDTMQEFSTVQAV QATMILSTILCCIAFLIFVLQLFRLKQGERFVLTSIIQLMSCLCVMVAASIYTDRRKDIHDGNP QLYASTLDGSYGYSFILAWVAFAFTFISGLMYLILRKRK hide sequence

RefSeq Acc Id:	XP_020942300 ⟸ XM_021086641
- Peptide Label:	isoform X3
- UniProtKB:	A0A287A649 (UniProtKB/TrEMBL), A0A4X1VS33 (UniProtKB/TrEMBL), A0A8D0P0D7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLVLLAFIIIFHITSAALLFVATIDNAWWVGEEFFVDVWRVCVNNTNCTELDDTMQEFSTVQAV QATMILSTILCCIAFLIFVLQLFRLKQGERFVLTSIIQLMSCLCVMVAASIYTDRRKDIHDGNP QLYASTLDGSYGYSFILAWVAFAFTFISGLMYLILRKRK hide sequence

Ensembl Acc Id:

ENSSSCP00000037610 ⟸ ENSSSCT00000064420

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000037065	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015049099	UniProtKB/TrEMBL
	ENSSSCG00025051220	UniProtKB/TrEMBL
	ENSSSCG00030029184	UniProtKB/TrEMBL
	ENSSSCG00035066956	UniProtKB/TrEMBL
	ENSSSCG00040010978	UniProtKB/TrEMBL
	ENSSSCG00045000984	UniProtKB/TrEMBL
	ENSSSCG00050049499	UniProtKB/TrEMBL
	ENSSSCG00060072224	UniProtKB/TrEMBL
	ENSSSCG00065076673	UniProtKB/TrEMBL
	ENSSSCG00070025957	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000064420	ENTREZGENE
	ENSSSCT00000064420.3	UniProtKB/TrEMBL
	ENSSSCT00015065369.1	UniProtKB/TrEMBL
	ENSSSCT00025069982.1	UniProtKB/TrEMBL
	ENSSSCT00030040652.1	UniProtKB/TrEMBL
	ENSSSCT00035090280.1	UniProtKB/TrEMBL
	ENSSSCT00040014348.1	UniProtKB/TrEMBL
	ENSSSCT00045001452.1	UniProtKB/TrEMBL
	ENSSSCT00050067336.1	UniProtKB/TrEMBL
	ENSSSCT00060098697.1	UniProtKB/TrEMBL
	ENSSSCT00065105913.1	UniProtKB/TrEMBL
	ENSSSCT00070051941.1	UniProtKB/TrEMBL
	ENSSSCT00070051942.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.140.150	UniProtKB/TrEMBL
InterPro	EMP-2	UniProtKB/TrEMBL
	PMP-22/EMP/MP20	UniProtKB/TrEMBL
	PMP22/EMP/MP20/Claudin	UniProtKB/TrEMBL
	PMP22_EMP_MP20	UniProtKB/TrEMBL
NCBI Gene	EMP2	ENTREZGENE
PANTHER	EPITHELIAL MEMBRANE PROTEIN-RELATED	UniProtKB/TrEMBL
	PTHR10671:SF32	UniProtKB/TrEMBL
Pfam	PMP22_Claudin	UniProtKB/TrEMBL
PRINTS	EPMEMFAMILY	UniProtKB/TrEMBL
	EPMEMPROT2	UniProtKB/TrEMBL
PROSITE	PMP22_1	UniProtKB/TrEMBL
	PMP22_2	UniProtKB/TrEMBL
UniProt	A0A287A649	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1VS33	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0P0D7	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:87689	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

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MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM