GPR3 (G protein-coupled receptor 3) - Rat Genome Database

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Gene: GPR3 (G protein-coupled receptor 3) Sus scrofa
Analyze
Symbol: GPR3
Name: G protein-coupled receptor 3
RGD ID: 14230511
Description: INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway; G protein-coupled receptor signaling pathway coupled to cGMP nucleotide second messenger; negative regulation of cell cycle; FOUND IN cytoplasm; nuclear membrane; plasma membrane
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: G-protein coupled receptor 3
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl684,610,107 - 84,613,202 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1684,610,107 - 84,613,202 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2678,180,803 - 78,184,402 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22207171   PMID:22498817   PMID:22685609  


Genomics

Comparative Map Data
GPR3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl684,610,107 - 84,613,202 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1684,610,107 - 84,613,202 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2678,180,803 - 78,184,402 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GPR3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl127,392,622 - 27,395,814 (+)EnsemblGRCh38hg38GRCh38
GRCh38127,392,622 - 27,395,814 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37127,719,126 - 27,722,318 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36127,591,739 - 27,594,905 (+)NCBINCBI36hg18NCBI36
Build 34127,403,293 - 27,406,457NCBI
Celera126,116,440 - 26,119,606 (+)NCBI
Cytogenetic Map1p36.11NCBI
HuRef125,975,292 - 25,978,462 (+)NCBIHuRef
CHM1_1127,833,894 - 27,837,064 (+)NCBICHM1_1
Gpr3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394132,936,651 - 132,939,847 (-)NCBIGRCm39mm39
GRCm39 Ensembl4132,936,651 - 132,939,847 (-)Ensembl
GRCm384133,209,340 - 133,212,536 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4133,209,340 - 133,212,536 (-)EnsemblGRCm38mm10GRCm38
MGSCv374132,765,255 - 132,768,451 (-)NCBIGRCm37mm9NCBIm37
MGSCv364132,481,416 - 132,484,583 (-)NCBImm8
Celera4131,374,420 - 131,377,613 (-)NCBICelera
Cytogenetic Map4D2.3NCBI
Gpr3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.25145,411,500 - 145,414,621 (-)NCBI
Rnor_6.0 Ensembl5151,394,524 - 151,397,603 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.05151,394,118 - 151,397,634 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05155,060,168 - 155,063,449 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45151,915,723 - 151,916,688 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15151,925,761 - 151,926,727 (+)NCBI
Celera5143,834,248 - 143,835,213 (-)NCBICelera
Cytogenetic Map5q36NCBI
Gpr3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554526,648,470 - 6,651,389 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554526,648,470 - 6,651,938 (+)NCBIChiLan1.0ChiLan1.0
GPR3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1127,702,003 - 27,705,195 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl127,703,180 - 27,704,172 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0126,654,198 - 26,657,421 (+)NCBIMhudiblu_PPA_v0panPan3
GPR3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1272,882,127 - 72,885,369 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl272,883,183 - 72,884,175 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha269,459,125 - 69,462,341 (-)NCBI
ROS_Cfam_1.0273,443,788 - 73,447,004 (-)NCBI
UMICH_Zoey_3.1270,269,792 - 70,273,006 (-)NCBI
UNSW_CanFamBas_1.0271,281,278 - 71,284,494 (-)NCBI
UU_Cfam_GSD_1.0272,277,315 - 72,280,532 (-)NCBI
Gpr3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505845,873,901 - 45,877,167 (+)NCBI
SpeTri2.0NW_00493647411,699,725 - 11,701,311 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GPR3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120105,395,207 - 105,398,352 (-)NCBI
ChlSab1.1 Ensembl20105,396,228 - 105,397,220 (-)Ensembl
Vero_WHO_p1.0NW_02366603311,060,423 - 11,063,756 (+)NCBI
Gpr3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462476411,281,833 - 11,292,573 (+)NCBI


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

endocrine system nervous system
High
Medium
Low 1 20
Below cutoff 1

Sequence


Reference Sequences
RefSeq Acc Id: ENSSSCT00000003970   ⟹   ENSSSCP00000003879
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl684,610,107 - 84,613,202 (+)Ensembl
RefSeq Acc Id: NM_001257225   ⟹   NP_001244154
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1684,610,107 - 84,613,202 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001244154 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein ADY76655 (Get FASTA)   NCBI Sequence Viewer  
  ADY76656 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_001244154   ⟸   NM_001257225
- UniProtKB: F1STP7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000003879   ⟸   ENSSSCT00000003970
Protein Domains
G_PROTEIN_RECEP_F1_2


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000003576 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00070015318 UniProtKB/TrEMBL
Ensembl Protein ENSSSCP00000003879 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCP00070025153 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000003970 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCT00070030150 UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  GPR3 UniProtKB/TrEMBL
  GPR_3/6/12_orphan UniProtKB/TrEMBL
KEGG Report ssc:100512611 UniProtKB/TrEMBL
NCBI Gene GPR3 ENTREZGENE
Pfam 7tm_1 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  GPR3ORPHANR UniProtKB/TrEMBL
  GPRORPHANR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
UniProt A0A4X1UBB1_PIG UniProtKB/TrEMBL
  F1STP7 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:88628 ENTREZGENE