SLC25A5 (solute carrier family 25 member 5) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: SLC25A5 (solute carrier family 25 member 5) Sus scrofa
Analyze
Symbol: SLC25A5
Name: solute carrier family 25 member 5
RGD ID: 14227473
Description: ENCODES a protein that exhibits adenine nucleotide transmembrane transporter activity (inferred); ATP:ADP antiporter activity (inferred); oxidative phosphorylation uncoupler activity (inferred); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); ASSOCIATED WITH autistic disorder (ortholog); syndromic X-linked intellectual disability Lubs type (ortholog); FOUND IN membrane raft (ortholog); mitochondrial inner membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: adenine nucleotide translocator 2; ADP/ATP translocase 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX97,919,290 - 97,922,239 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X97,919,295 - 97,922,245 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X113,743,301 - 113,746,201 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References
Additional References at PubMed
PMID:14681463  


Genomics

Comparative Map Data
SLC25A5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX97,919,290 - 97,922,239 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X97,919,295 - 97,922,245 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X113,743,301 - 113,746,201 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SLC25A5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X119,468,444 - 119,471,396 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 EnsemblX119,468,422 - 119,471,396 (+)EnsemblGRCh38hg38GRCh38
GRCh37X118,602,407 - 118,605,359 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X118,486,433 - 118,489,320 (+)NCBINCBI36Build 36hg18NCBI36
Build 34X118,384,290 - 118,387,161NCBI
CeleraX119,057,070 - 119,060,067 (+)NCBICelera
Cytogenetic MapXq24NCBI
HuRefX108,095,551 - 108,098,548 (+)NCBIHuRef
CHM1_1X118,513,525 - 118,516,522 (+)NCBICHM1_1
T2T-CHM13v2.0X117,846,144 - 117,849,097 (+)NCBIT2T-CHM13v2.0
Slc25a5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X36,059,250 - 36,062,461 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX36,059,304 - 36,062,460 (+)EnsemblGRCm39 Ensembl
GRCm38X36,795,597 - 36,798,808 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX36,795,651 - 36,798,807 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X34,335,647 - 34,338,801 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X33,227,097 - 33,230,251 (+)NCBIMGSCv36mm8
CeleraX23,519,362 - 23,522,516 (+)NCBICelera
Cytogenetic MapXA3.3NCBI
cM MapX21.2NCBI
Slc25a5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2X116,031,896 - 116,034,963 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX116,031,803 - 116,034,967 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX118,134,175 - 118,137,242 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0X121,703,302 - 121,706,369 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0X119,249,467 - 119,252,534 (+)NCBIRnor_WKY
Rnor_6.0X123,404,570 - 123,407,637 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX123,404,518 - 123,407,645 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X123,549,736 - 123,552,803 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X8,072,239 - 8,075,306 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X8,077,794 - 8,080,862 (-)NCBI
CeleraX115,261,785 - 115,264,852 (+)NCBICelera
Cytogenetic MapXq35NCBI
Slc25a5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955534496,933 - 510,934 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955534497,518 - 500,309 (-)NCBIChiLan1.0ChiLan1.0
SLC25A5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1X118,926,743 - 118,929,632 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX118,926,743 - 118,929,624 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0X108,501,654 - 108,504,591 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
SLC25A5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X91,523,649 - 91,526,447 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX91,523,643 - 91,526,479 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX77,598,424 - 77,601,277 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X93,263,040 - 93,265,893 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1X90,715,875 - 90,718,728 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X92,474,556 - 92,477,406 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X92,203,556 - 92,206,409 (+)NCBIUU_Cfam_GSD_1.0
Slc25a5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X90,552,351 - 90,555,323 (+)NCBIHiC_Itri_2
SpeTri2.0NW_00493647910,432,172 - 10,435,154 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LOC103247334
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Vero_WHO_p1.0NW_02366606532,209,084 - 32,212,570 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc25a5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248953,472,791 - 3,477,568 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248953,472,810 - 3,475,713 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 10 2 3 5 23 2 3 3
Low 2 2
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSSSCT00000013802   ⟹   ENSSSCP00000013421
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX97,919,290 - 97,922,239 (+)Ensembl
RefSeq Acc Id: ENSSSCT00000075618   ⟹   ENSSSCP00000070952
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX97,919,290 - 97,922,239 (+)Ensembl
RefSeq Acc Id: ENSSSCT00000082791   ⟹   ENSSSCP00000065241
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX97,920,268 - 97,922,245 (+)Ensembl
RefSeq Acc Id: XM_001927440   ⟹   XP_001927475
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X97,919,295 - 97,922,245 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_001927475 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein CAN99572 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_001927475   ⟸   XM_001927440
- UniProtKB: F2Z565 (UniProtKB/TrEMBL),   A0A4X1W7H9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000070952   ⟸   ENSSSCT00000075618
RefSeq Acc Id: ENSSSCP00000013421   ⟸   ENSSSCT00000013802
RefSeq Acc Id: ENSSSCP00000065241   ⟸   ENSSSCT00000082791


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000012623 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015008855 UniProtKB/TrEMBL
  ENSSSCG00025071021 UniProtKB/TrEMBL
  ENSSSCG00030037502 UniProtKB/TrEMBL
  ENSSSCG00035075010 UniProtKB/TrEMBL
  ENSSSCG00040034797 UniProtKB/TrEMBL
  ENSSSCG00045034861 UniProtKB/TrEMBL
  ENSSSCG00050073582 UniProtKB/TrEMBL
  ENSSSCG00055027109 UniProtKB/TrEMBL
  ENSSSCG00060040187 UniProtKB/TrEMBL
  ENSSSCG00065035265 UniProtKB/TrEMBL
  ENSSSCG00070029072 UniProtKB/TrEMBL
Ensembl Protein ENSSSCP00000013421 ENTREZGENE
  ENSSSCP00000013421.2 UniProtKB/TrEMBL
  ENSSSCP00000065241.1 UniProtKB/TrEMBL
  ENSSSCP00000070952.1 UniProtKB/TrEMBL
  ENSSSCP00015004654.1 UniProtKB/TrEMBL
  ENSSSCP00015004675.1 UniProtKB/TrEMBL
  ENSSSCP00025042879.1 UniProtKB/TrEMBL
  ENSSSCP00025042922.1 UniProtKB/TrEMBL
  ENSSSCP00030023846.1 UniProtKB/TrEMBL
  ENSSSCP00030023856.1 UniProtKB/TrEMBL
  ENSSSCP00035043452.1 UniProtKB/TrEMBL
  ENSSSCP00035043465.1 UniProtKB/TrEMBL
  ENSSSCP00040019637.1 UniProtKB/TrEMBL
  ENSSSCP00040019642.1 UniProtKB/TrEMBL
  ENSSSCP00045042001.1 UniProtKB/TrEMBL
  ENSSSCP00045042069.1 UniProtKB/TrEMBL
  ENSSSCP00050043688.1 UniProtKB/TrEMBL
  ENSSSCP00050043691.1 UniProtKB/TrEMBL
  ENSSSCP00055042770.1 UniProtKB/TrEMBL
  ENSSSCP00055042798.1 UniProtKB/TrEMBL
  ENSSSCP00060023202.1 UniProtKB/TrEMBL
  ENSSSCP00060023207.1 UniProtKB/TrEMBL
  ENSSSCP00065020709.1 UniProtKB/TrEMBL
  ENSSSCP00065020711.1 UniProtKB/TrEMBL
  ENSSSCP00070049592.1 UniProtKB/TrEMBL
  ENSSSCP00070049593.1 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000013802 ENTREZGENE
  ENSSSCT00000013802.5 UniProtKB/TrEMBL
  ENSSSCT00000075618.1 UniProtKB/TrEMBL
  ENSSSCT00000082791.1 UniProtKB/TrEMBL
  ENSSSCT00015011789.1 UniProtKB/TrEMBL
  ENSSSCT00015011836.1 UniProtKB/TrEMBL
  ENSSSCT00025097637.1 UniProtKB/TrEMBL
  ENSSSCT00025097706.1 UniProtKB/TrEMBL
  ENSSSCT00030052261.1 UniProtKB/TrEMBL
  ENSSSCT00030052283.1 UniProtKB/TrEMBL
  ENSSSCT00035101956.1 UniProtKB/TrEMBL
  ENSSSCT00035101985.1 UniProtKB/TrEMBL
  ENSSSCT00040046839.1 UniProtKB/TrEMBL
  ENSSSCT00040046849.1 UniProtKB/TrEMBL
  ENSSSCT00045059861.1 UniProtKB/TrEMBL
  ENSSSCT00045059932.1 UniProtKB/TrEMBL
  ENSSSCT00050100625.1 UniProtKB/TrEMBL
  ENSSSCT00050100629.1 UniProtKB/TrEMBL
  ENSSSCT00055053615.1 UniProtKB/TrEMBL
  ENSSSCT00055053650.1 UniProtKB/TrEMBL
  ENSSSCT00060054416.1 UniProtKB/TrEMBL
  ENSSSCT00060054424.1 UniProtKB/TrEMBL
  ENSSSCT00065048037.1 UniProtKB/TrEMBL
  ENSSSCT00065048041.1 UniProtKB/TrEMBL
  ENSSSCT00070058326.1 UniProtKB/TrEMBL
  ENSSSCT00070058327.1 UniProtKB/TrEMBL
Gene3D-CATH 1.50.40.10 UniProtKB/TrEMBL
InterPro Aden_trnslctor UniProtKB/TrEMBL
  Mit_carrier UniProtKB/TrEMBL
  Mitochondrial_sb/sol_carrier UniProtKB/TrEMBL
  Mt_carrier_dom_sf UniProtKB/TrEMBL
KEGG Report ssc:100158185 UniProtKB/TrEMBL
NCBI Gene SLC25A5 ENTREZGENE
PANTHER PTHR45635 UniProtKB/TrEMBL
Pfam Mito_carr UniProtKB/TrEMBL
PRINTS ADPTRNSLCASE UniProtKB/TrEMBL
  MITOCARRIER UniProtKB/TrEMBL
PROSITE SOLCAR UniProtKB/TrEMBL
Superfamily-SCOP SSF103506 UniProtKB/TrEMBL
UniProt A0A4X1W587_PIG UniProtKB/TrEMBL
  A0A4X1W7H9 ENTREZGENE, UniProtKB/TrEMBL
  A0A5G2R3N5_PIG UniProtKB/TrEMBL
  A0A5G2R3W2_PIG UniProtKB/TrEMBL
  A5PI51_PIG UniProtKB/TrEMBL
  F2Z565 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:93022 ENTREZGENE