LOC110258289 (olfactory receptor 10C1-like) - Rat Genome Database

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Pathways
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Gene: LOC110258289 (olfactory receptor 10C1-like) Sus scrofa
Analyze
Symbol: LOC110258289
Name: olfactory receptor 10C1-like
RGD ID: 14226108
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); olfactory receptor activity (inferred); INVOLVED IN detection of chemical stimulus involved in sensory perception of smell (inferred); G protein-coupled receptor signaling pathway (inferred); sensory perception of smell (inferred); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position: No map positions available.


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
membrane  (IEA)
plasma membrane  (IBA,IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

nervous system
High
Medium
Low
Below cutoff 3

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_021081457 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000554 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Protein Sequences
Protein RefSeqs XP_020937116 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000032130.1
  ENSSSCP00000049827.3
  ENSSSCP00070003823.1
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000036111 UniProtKB/TrEMBL
  ENSSSCG00070002503 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000037436.3 UniProtKB/TrEMBL
  ENSSSCT00000065310.1 UniProtKB/TrEMBL
  ENSSSCT00070004661.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
NCBI Gene LOC110258289 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR UniProtKB/TrEMBL
Pfam 7tm_1 UniProtKB/TrEMBL
  7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A286ZKY3_PIG UniProtKB/TrEMBL
  A0A287B0Z2_PIG UniProtKB/TrEMBL
  A0A4X1SMP1 ENTREZGENE, UniProtKB/TrEMBL