ITGAV (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 15 | 91,604,676 - 91,711,851 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 15 | 91,604,666 - 91,711,843 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 15 | 101,654,958 - 101,717,935 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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ITGAV (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 2 | 186,590,056 - 186,680,901 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 2 | 186,590,010 - 186,680,901 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 2 | 187,454,783 - 187,545,628 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 2 | 187,163,045 - 187,253,873 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 2 | 187,280,305 - 187,371,133 | NCBI | | | | | Celera | 2 | 181,050,405 - 181,141,257 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | q32.1 | NCBI | | | | | HuRef | 2 | 179,314,524 - 179,405,486 (+) | NCBI | | HuRef | | | CHM1_1 | 2 | 187,460,842 - 187,551,625 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 2 | 187,079,132 - 187,170,024 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Itgav (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 2 | 83,554,796 - 83,637,261 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 83,554,741 - 83,637,260 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 83,722,303 - 83,806,917 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 83,724,397 - 83,806,916 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 83,564,554 - 83,647,073 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 83,525,354 - 83,604,646 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 85,367,604 - 85,456,006 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | D | NCBI | | | | | cM Map | 2 | 49.33 | NCBI | | | | |
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Itgav (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 3 | 89,245,382 - 89,333,512 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 68,838,514 - 68,926,653 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 68,838,189 - 68,926,639 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 72,233,903 - 72,315,469 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 80,832,555 - 80,914,128 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 78,567,077 - 78,655,183 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 71,113,269 - 71,205,958 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 71,114,100 - 71,202,411 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 77,643,270 - 77,731,358 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 66,953,403 - 67,029,774 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 3 | 66,848,789 - 66,926,146 (+) | NCBI | | | | | Celera | 3 | 68,209,136 - 68,297,332 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | q24 | NCBI | | | | |
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Itgav (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955403 | 11,592,339 - 11,659,297 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955403 | 11,588,536 - 11,669,809 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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ITGAV (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 13 | 89,252,238 - 89,359,439 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 2B | 89,280,655 - 89,374,419 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 2B | 73,880,962 - 73,972,486 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 2B | 191,680,655 - 191,773,028 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 2B | 191,680,655 - 191,773,028 (+) | Ensembl | panpan1.1 | | panPan2 | |
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ITGAV (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 36 | 28,815,215 - 28,890,569 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 36 | 28,804,013 - 28,887,430 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 36 | 28,702,231 - 28,789,503 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 36 | 29,028,662 - 29,116,151 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 36 | 29,031,003 - 29,116,148 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 36 | 29,087,085 - 29,173,016 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 36 | 29,020,979 - 29,108,231 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 36 | 29,188,373 - 29,276,043 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Itgav (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405303 | 145,999,260 - 146,087,955 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936506 | 10,750,101 - 10,839,303 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936506 | 10,750,116 - 10,839,018 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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ITGAV (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 10 | 72,125,710 - 72,216,757 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 10 | 72,125,962 - 72,216,809 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666040 | 127,289,910 - 127,381,992 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Itgav (Heterocephalus glaber - naked mole-rat) |
|