LOC100518239 (olfactory receptor 7A17-like) - Rat Genome Database

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Pathways
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Gene: LOC100518239 (olfactory receptor 7A17-like) Sus scrofa
Analyze
Symbol: LOC100518239
Name: olfactory receptor 7A17-like
RGD ID: 14221805
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); olfactory receptor activity (inferred); INVOLVED IN detection of chemical stimulus involved in sensory perception of smell (inferred); G protein-coupled receptor signaling pathway (inferred); signal transduction (inferred); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1264,371,779 - 64,383,648 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2264,292,613 - 64,293,536 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Variants

.
Variants in LOC100518239
368 total Variants

Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_013987450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_013987450   ⟹   XP_013842904
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1264,371,779 - 64,383,648 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013842904 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00070007196.1
Reference Protein Sequences
RefSeq Acc Id: XP_013842904   ⟸   XM_013987450
- UniProtKB: A0A4X1SWA3 (UniProtKB/TrEMBL)
- Sequence:
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00070004641 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00070008759.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
KEGG Report ssc:100518239 UniProtKB/TrEMBL
NCBI Gene LOC100518239 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR FAMILY 7 SUBFAMILY A MEMBER 55 UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A4X1SWA3 ENTREZGENE, UniProtKB/TrEMBL