FSCB (fibrous sheath CABYR binding protein) - Rat Genome Database

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Gene: FSCB (fibrous sheath CABYR binding protein) Sus scrofa
Analyze
Symbol: FSCB
Name: fibrous sheath CABYR binding protein
RGD ID: 14215447
Description: ENCODES a protein that exhibits calcium ion binding (inferred); INVOLVED IN negative regulation of protein sumoylation (inferred); ASSOCIATED WITH Brain-Lung-Thyroid Syndrome (ortholog); Fanconi anemia (ortholog); genetic disease (ortholog); FOUND IN sperm fibrous sheath (inferred); sperm principal piece (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: fibrous sheath CABYR-binding protein; fibrous sheath CABYR-binding protein-like
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11174,732,612 - 174,734,834 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21194,527,331 - 194,530,049 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
FSCB
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11174,732,612 - 174,734,834 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21194,527,331 - 194,530,049 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FSCB
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381444,504,149 - 44,507,283 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1444,504,149 - 44,507,283 (-)EnsemblGRCh38hg38GRCh38
GRCh371444,973,352 - 44,976,486 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361444,043,294 - 44,046,208 (-)NCBINCBI36Build 36hg18NCBI36
Build 341444,043,297 - 44,046,208NCBI
Celera1424,834,054 - 24,837,201 (-)NCBICelera
Cytogenetic Map14q21.2NCBI
HuRef1425,084,764 - 25,087,947 (-)NCBIHuRef
CHM1_11444,911,512 - 44,914,659 (-)NCBICHM1_1
T2T-CHM13v2.01438,695,562 - 38,698,696 (-)NCBIT2T-CHM13v2.0
Fscb
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391264,518,107 - 64,521,672 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1264,518,104 - 64,521,464 (-)EnsemblGRCm39 Ensembl
GRCm381264,471,333 - 64,474,898 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1264,471,330 - 64,474,690 (-)EnsemblGRCm38mm10GRCm38
MGSCv371265,572,320 - 65,575,885 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361265,390,107 - 65,393,503 (-)NCBIMGSCv36mm8
MGSCv361259,015,128 - 59,018,524 (-)NCBIMGSCv36mm8
Celera1265,602,165 - 65,605,766 (-)NCBICelera
Cytogenetic Map12C1NCBI
cM Map1226.96NCBI
Fscb
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8688,264,133 - 88,266,925 (-)NCBIGRCr8
mRatBN7.2682,527,849 - 82,530,641 (-)NCBImRatBN7.2mRatBN7.2
UTH_Rnor_SHR_Utx682,853,462 - 82,856,254 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0683,152,822 - 83,155,614 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0682,602,830 - 82,605,622 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0686,220,260 - 86,223,052 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl686,220,260 - 86,223,052 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0695,722,718 - 95,725,510 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4685,795,682 - 85,798,474 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera681,098,527 - 81,101,319 (-)NCBICelera
Cytogenetic Map6q24NCBI
Fscb
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495540917,433,213 - 17,435,957 (+)NCBIChiLan1.0ChiLan1.0
FSCB
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21545,680,187 - 45,683,247 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11444,896,698 - 44,899,758 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01425,124,746 - 25,127,510 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11443,453,313 - 43,456,049 (-)NCBIpanpan1.1PanPan1.1panPan2
FSCB
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1822,004,599 - 22,033,057 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl822,004,789 - 22,007,425 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha821,822,933 - 21,851,708 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0822,163,499 - 22,192,396 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1821,826,346 - 21,855,159 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0821,891,700 - 21,920,517 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0822,229,047 - 22,257,861 (-)NCBIUU_Cfam_GSD_1.0
Fscb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864053,978,548 - 53,981,509 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049365834,707,636 - 4,710,286 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FSCB
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12421,611,678 - 21,614,404 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605310,670,844 - 10,673,537 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fscb
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473124,149,780 - 24,152,409 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in FSCB
41 total Variants

Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_001924913   ⟹   XP_001924948
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11174,732,612 - 174,734,834 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_001924948 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000079006.1
  ENSSSCP00035036361.1
Reference Protein Sequences
RefSeq Acc Id: XP_001924948   ⟸   XM_001924913
- UniProtKB: A0A8D1ARU7 (UniProtKB/TrEMBL)
- Sequence:


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000061989 UniProtKB/TrEMBL
  ENSSSCG00035064732 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000098122.1 UniProtKB/TrEMBL
  ENSSSCT00035087150.1 UniProtKB/TrEMBL
InterPro FSCB UniProtKB/TrEMBL
NCBI Gene FSCB ENTREZGENE
PANTHER FIBROUS SHEATH CABYR-BINDING PROTEIN UniProtKB/TrEMBL
  FIBROUS SHEATH CABYR-BINDING PROTEIN UniProtKB/TrEMBL
UniProt A0A8D1ARU7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8W4FI55_PIG UniProtKB/TrEMBL