TSPAN10 (tetraspanin 10) - Rat Genome Database

Name: TSPAN10
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: TSPAN10 (tetraspanin 10) Sus scrofa

Analyze

Symbol:

TSPAN10

Name:

tetraspanin 10

RGD ID:

14211838

Description:

ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN establishment of protein localization to organelle (ortholog); protein maturation (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN membrane (inferred); INTERACTS WITH deoxynivalenol

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

tetraspanin-10

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TSPAN10 (tetraspanin 10)	HGNC	Ensembl, NCBI, OrthoDB
Mus musculus (house mouse):	Tspan10 (tetraspanin 10)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Tspan10 (tetraspanin 10)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tspan10 (tetraspanin 10)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TSPAN10 (tetraspanin 10)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TSPAN10 (tetraspanin 10)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tspan10 (tetraspanin 10)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TSPAN10 (tetraspanin 10)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tspan10 (tetraspanin 10)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	1,239,834 - 1,245,181 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	1,239,824 - 1,251,235 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

deoxynivalenol (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

establishment of protein localization to organelle (ISO)

protein maturation (ISO)

Cellular Component

membrane (IEA)

plasma membrane (IBA)

Molecular Function

enzyme binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

TSPAN10
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	1,239,834 - 1,245,181 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	1,239,824 - 1,251,235 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

TSPAN10
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	81,637,196 - 81,648,755 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	81,637,171 - 81,648,754 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	79,604,222 - 79,615,785 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	77,219,754 - 77,226,184 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	17	76,254,397 - 76,260,803 (+)	NCBI		Celera
Cytogenetic Map	17	q25.3	NCBI
HuRef	17	75,055,867 - 75,061,978 (+)	NCBI		HuRef
CHM1_1	17	79,695,250 - 79,701,680 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	17	82,554,131 - 82,565,683 (+)	NCBI		T2T-CHM13v2.0

Tspan10
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	120,333,457 - 120,338,147 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	120,333,470 - 120,337,776 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	120,442,631 - 120,447,321 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	120,442,644 - 120,446,950 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	120,303,945 - 120,308,635 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	120,258,783 - 120,263,040 (+)	NCBI		MGSCv36	mm8
Celera	11	132,177,489 - 132,182,179 (+)	NCBI		Celera
Cytogenetic Map	11	E2	NCBI
cM Map	11	84.13	NCBI

Tspan10
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	106,213,672 - 106,219,951 (+)	NCBI		GRCr8
mRatBN7.2	10	105,715,803 - 105,721,503 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	105,715,961 - 105,719,813 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	10	109,614,664 - 109,619,581 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	109,614,965 - 109,618,807 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	109,208,382 - 109,213,084 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Celera	10	104,259,719 - 104,264,642 (+)	NCBI		Celera
Cytogenetic Map	10	q32.3	NCBI

Tspan10
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955506	1,442,761 - 1,448,044 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955506	1,442,378 - 1,448,726 (-)	NCBI	ChiLan1.0	ChiLan1.0

TSPAN10
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	98,223,725 - 98,234,868 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	103,123,996 - 103,135,169 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	76,092,970 - 76,104,139 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	81,793,153 - 81,805,697 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	81,793,354 - 81,803,846 (+)	Ensembl	panpan1.1		panPan2

TSPAN10
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	530,090 - 532,951 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	1,132,708 - 1,134,997 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	1,124,037 - 1,126,357 (-)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	9	1,148,932 - 1,151,221 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	1,275,533 - 1,277,853 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	1,354,551 - 1,356,871 (-)	NCBI		UU_Cfam_GSD_1.0

Tspan10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	1,149,304 - 1,153,876 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936594	5,258,065 - 5,263,037 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936594	5,258,063 - 5,262,655 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TSPAN10
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	73,575,261 - 73,581,398 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	73,575,321 - 73,580,938 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666077	44,976,083 - 44,986,659 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tspan10
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624801	10,591,851 - 10,597,157 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624801	10,591,944 - 10,597,112 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in TSPAN10
128 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium
Low	4	3		3	2	18			1
Below cutoff	5	1	3	2		4	1	3	2

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_021066469	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021066470	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021066471	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000080	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01103199	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000054383 ⟹ ENSSSCP00000052546

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	12	1,239,834 - 1,245,181 (-)	Ensembl

RefSeq Acc Id:

XM_021066469 ⟹ XP_020922128

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	12	1,239,824 - 1,251,235 (-)	NCBI

Sequence:

show sequence

GGCTCCGCGCAGACGCGCGCCCCCGCTGGCCACGCGCGGGAGAGACGCTGCGGAGAGGTCGGCG
GGCCCGGGGGCGTCGGCTCGGCCTGGCGTTCCCGACACCTGGTCACACGGAAACGGAGACAGGC
TCGAGAAGACGCTGTCTCAAGCCCTAAAATATGACTTCTCACATGATCCGGTCGTGACCACGGC
CTCCCGGTGGGGCTCCCAGCTCACAGAGCGGCGGGGGCGCGAGCAGCACCAGCCCCGGTGTCCC
AGCCAGAGAGGCCGGCGGGGCCAGAGCACAGGTGCTGGTGGAGGATGGAGGCGGGGGAAAGGAG
CCCCCTGCTGGCCCAGGGTGCTGGGTGTCAGGAAGCACCCCTCGCCAGTAGCAGCCCGCTCACT
GCACGTCGCGCAGGGCCGGCGCCCTGGGAGGACCAGGCCTGGAGGGCCGGCCTTCGGGGGGTCC
TGGCCTGTCCCCCCCCTGCTGGAAGCAGCTGCCTCAAGTGCCTGGTCTTTCTGACCAACTGCCT
CTTCTCCCTGCTCGGCCTGCTGGCCCTGGCCGCTGGGCTCTGGGGCCTGGCTGTCAAGGGCTCC
CTGGGGAGGAGCTGCGGGGGCCCCCTGCCCGCAGACCCCATGCTGGGGCTGGTGCTGGGCGGGC
TGGCCGTCAGCGCGGTGAGCCTGGCGGGCTGCCTGGGCGCCCTCTGCGAGAATGCCTTTCTGCT
GCACTGCTTCTCTGGGGGCGTCCTCGCTTTCCTGGTGCTGGAGGCCGTGGCAGGGGCCCTGGTG
GCGGCCCTCTGGGGCCAGCTGCAGGACGGCCTGGAGCACGTCCTCCGCGAAGCCATCACCCACT
ACCAGGACGACCCGGACCTGTGCTTCCTCATCGACCAAGTCCAGCTCGGGCTGCAGTGCTGCGG
GGCTGCCTCCTACCAGGACTGGCAGCGGAACCCGTACTTCAACTGTAGCTCCGCCCGGGTCCAG
GCCTGCCGTCTTCCTGCCTCCTGCTGCATCGACCCCTGGGAAGATGGGGCCTCTGTCAACGACC
AGTGTGGCTTTGGGGCCCTGGGCCTGGGTGAAGACGGGGCCCAGAGGCGGGTGCACCTGGAGGG
CTGCAGCCCCCAACTCCGCCAGTGGTTGCACAGCAACATCGGGGCTATAGGCAGCTGCTTCATC
ACGGTCGTCACGGTCCAGGGGGCTGAGGTCCTGCTGGCCACCCAGCTGGTGAGGGCCCTGGCTG
TTGCAAGGGCGCAGCAGGGAGGCTGGGCCCGTCCACCAGACCCCCAGACCCAGTGCCCTGCCCT
TTGCCAAAGCGGGCTGCCTGGCAGGTGGGACCGAAGACCAGGGCACTGGGATGGGGTCTGGGGC
TGCAGGTCTCCCTTTCTCCCCCCGGGAAGATGTCAGAGTGACCCGCCTGGGGCTGGGACCCCCA
GCGCCCTTCCCCCTGCTGCCTGCCGTCTCCCCAGCACCCTTCCCCCTGCTGCCTGCCCACCGCT
GTAAGCCGACCCAACGACTGCCTGGCCAATGTCTGCTGCCCATGGGGGGTGCCAGGCAAAGCCC
CCTGGCCGGTGGGGAGAACAGGGGCAAGCAGGAACTGGTTGGTCGGAACCTGCCTCTCAGCCCC
CACTCTGACCCTCACCTCCGACCCCCACTTCCGACCACCTCTGAGTCCCATCTCCAAGCCCAGT
CTGGGAGGCCCCATGTCCTCACCAAAGGCTGACACCTGCCCTCCTCTGGGGCCCCTTCCCCCTT
TCCTGTCCCTGGTGGCAGTTGACCTTGGGGCCCGGGCCTCTCCCTTGAGTGCTCTCCCTTTGGG
GGTGTGGCTTTCCTGGAGACGTGTCACTGAGGGAACTGTGGCAAGCCAAGCCGAGGGGGCAGCG
TGAGGGCCTTGCCTCTCTAACCACCCGAGGATCGGCCGCCAGTGGAGCCCCCCCAGCAGGCGCC
TTCGTGCCCTCCCCGCGGTCACCCCTGCTGGGGCTTTGCCGCCTCTGGTTAACAATGCTTTCTC
TGGCCTTTGCATAAACGGGGTCCCAGGGGCCCCTCCTCAAGAGTCA

hide sequence

RefSeq Acc Id:

XM_021066470 ⟹ XP_020922129

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	12	1,239,824 - 1,251,224 (-)	NCBI

Sequence:

show sequence

GACGCGCGCCCCCGCTGGCCACGCGCGGGAGAGACGCTGCGGAGAGGTCGGCGGGCCCGGGGGC
GTCGGCTCGGCCTGGCGTTCCCGACACCTGGTCACACGGAAACGGAGACAGGCTCGAGAAGCAG
ACGCTGTCTCAAGCCCTAAAATATGACTTCTCACATGATCCGGTCGTGACCACGGCCTCCCGGT
GGGGCTCCCAGCTCACAGAGCGGCGGGGGCGCGAGCAGCACCAGCCCCGGTGTCCCAGCCAGAG
AGGCCGGCGGGGCCAGAGCACAGGTGCTGGTGGAGGATGGAGGCGGGGGAAAGGAGCCCCCTGC
TGGCCCAGGGTGCTGGGTGTCAGGAAGCACCCCTCGCCAGTAGCAGCCCGCTCACTGCACGTCG
CGCAGGGCCGGCGCCCTGGGAGGACCAGGCCTGGAGGGCCGGCCTTCGGGGGGTCCTGGCCTGT
CCCCCCCCTGCTGGAAGCAGCTGCCTCAAGTGCCTGGTCTTTCTGACCAACTGCCTCTTCTCCC
TGCTCGGCCTGCTGGCCCTGGCCGCTGGGCTCTGGGGCCTGGCTGTCAAGGGCTCCCTGGGGAG
GAGCTGCGGGGGCCCCCTGCCCGCAGACCCCATGCTGGGGCTGGTGCTGGGCGGGCTGGCCGTC
AGCGCGGTGAGCCTGGCGGGCTGCCTGGGCGCCCTCTGCGAGAATGCCTTTCTGCTGCACTGCT
TCTCTGGGGGCGTCCTCGCTTTCCTGGTGCTGGAGGCCGTGGCAGGGGCCCTGGTGGCGGCCCT
CTGGGGCCAGCTGCAGGACGGCCTGGAGCACGTCCTCCGCGAAGCCATCACCCACTACCAGGAC
GACCCGGACCTGTGCTTCCTCATCGACCAAGTCCAGCTCGGGCTGCAGTGCTGCGGGGCTGCCT
CCTACCAGGACTGGCAGCGGAACCCGTACTTCAACTGTAGCTCCGCCCGGGTCCAGGCCTGCCG
TCTTCCTGCCTCCTGCTGCATCGACCCCTGGGAAGATGGGGCCTCTGTCAACGACCAGTGTGGC
TTTGGGGCCCTGGGCCTGGGTGAAGACGGGGCCCAGAGGCGGGTGCACCTGGAGGGCTGCAGCC
CCCAACTCCGCCAGTGGTTGCACAGCAACATCGGGGCTATAGGCAGCTGCTTCATCACGGTCGT
CACGGTCCAGGGGGCTGAGGTCCTGCTGGCCACCCAGCTGGTGAGGGCCCTGGCTGTTGCAAGG
GCGCAGCAGGGAGGCTGGGCCCGTCCACCAGACCCCCAGACCCAGTGCCCTGCCCTTTGCCAAA
GCGGGCTGCCTGGCAGGTGGGACCGAAGACCAGGGCACTGGGATGGGGTCTGGGGCTGCAGGTC
TCCCTTTCTCCCCCCGGGAAGATGTCAGAGTGACCCGCCTGGGGCTGGGACCCCCAGCGCCCTT
CCCCCTGCTGCCTGCCGTCTCCCCAGCACCCTTCCCCCTGCTGCCTGCCCACCGCTGTAAGCCG
ACCCAACGACTGCCTGGCCAATGTCTGCTGCCCATGGGGGGTGCCAGGCAAAGCCCCCTGGCCG
GTGGGGAGAACAGGGGCAAGCAGGAACTGGTTGGTCGGAACCTGCCTCTCAGCCCCCACTCTGA
CCCTCACCTCCGACCCCCACTTCCGACCACCTCTGAGTCCCATCTCCAAGCCCAGTCTGGGAGG
CCCCATGTCCTCACCAAAGGCTGACACCTGCCCTCCTCTGGGGCCCCTTCCCCCTTTCCTGTCC
CTGGTGGCAGTTGACCTTGGGGCCCGGGCCTCTCCCTTGAGTGCTCTCCCTTTGGGGGTGTGGC
TTTCCTGGAGACGTGTCACTGAGGGAACTGTGGCAAGCCAAGCCGAGGGGGCAGCGTGAGGGCC
TTGCCTCTCTAACCACCCGAGGATCGGCCGCCAGTGGAGCCCCCCCAGCAGGCGCCTTCGTGCC
CTCCCCGCGGTCACCCCTGCTGGGGCTTTGCCGCCTCTGGTTAACAATGCTTTCTCTGGCCTTT
GCATAAACGGGGTCCCAGGGGCCCCTCCTCAAGAGTCA

hide sequence

RefSeq Acc Id:

XM_021066471 ⟹ XP_020922130

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	12	1,239,824 - 1,248,577 (-)	NCBI

Sequence:

show sequence

AAAAACAAAACAAAACAAAAATGCGAGAAAAGAAAGAAAGTTTGAGCATCTTCCATCTCTCATA
AGGACATTGGAGTAGGACCCCGCCAATGGCCTTATTTTAAGACGCTGTCTCAAGCCCTAAAATA
TGACTTCTCACATGATCCGGTCGTGACCACGGCCTCCCGGTGGGGCTCCCAGCTCACAGAGCGG
CGGGGGCGCGAGCAGCACCAGCCCCGGTGTCCCAGCCAGAGAGGCCGGCGGGGCCAGAGCACAG
GTGCTGGTGGAGGATGGAGGCGGGGGAAAGGAGCCCCCTGCTGGCCCAGGGTGCTGGGTGTCAG
GAAGCACCCCTCGCCAGTAGCAGCCCGCTCACTGCACGTCGCGCAGGGCCGGCGCCCTGGGAGG
ACCAGGCCTGGAGGGCCGGCCTTCGGGGGGTCCTGGCCTGTCCCCCCCCTGCTGGAAGCAGCTG
CCTCAAGTGCCTGGTCTTTCTGACCAACTGCCTCTTCTCCCTGCTCGGCCTGCTGGCCCTGGCC
GCTGGGCTCTGGGGCCTGGCTGTCAAGGGCTCCCTGGGGAGGAGCTGCGGGGGCCCCCTGCCCG
CAGACCCCATGCTGGGGCTGGTGCTGGGCGGGCTGGCCGTCAGCGCGGTGAGCCTGGCGGGCTG
CCTGGGCGCCCTCTGCGAGAATGCCTTTCTGCTGCACTGCTTCTCTGGGGGCGTCCTCGCTTTC
CTGGTGCTGGAGGCCGTGGCAGGGGCCCTGGTGGCGGCCCTCTGGGGCCAGCTGCAGGACGGCC
TGGAGCACGTCCTCCGCGAAGCCATCACCCACTACCAGGACGACCCGGACCTGTGCTTCCTCAT
CGACCAAGTCCAGCTCGGGCTGCAGTGCTGCGGGGCTGCCTCCTACCAGGACTGGCAGCGGAAC
CCGTACTTCAACTGTAGCTCCGCCCGGGTCCAGGCCTGCCGTCTTCCTGCCTCCTGCTGCATCG
ACCCCTGGGAAGATGGGGCCTCTGTCAACGACCAGTGTGGCTTTGGGGCCCTGGGCCTGGGTGA
AGACGGGGCCCAGAGGCGGGTGCACCTGGAGGGCTGCAGCCCCCAACTCCGCCAGTGGTTGCAC
AGCAACATCGGGGCTATAGGCAGCTGCTTCATCACGGTCGTCACGGTCCAGGGGGCTGAGGTCC
TGCTGGCCACCCAGCTGGTGAGGGCCCTGGCTGTTGCAAGGGCGCAGCAGGGAGGCTGGGCCCG
TCCACCAGACCCCCAGACCCAGTGCCCTGCCCTTTGCCAAAGCGGGCTGCCTGGCAGGTGGGAC
CGAAGACCAGGGCACTGGGATGGGGTCTGGGGCTGCAGGTCTCCCTTTCTCCCCCCGGGAAGAT
GTCAGAGTGACCCGCCTGGGGCTGGGACCCCCAGCGCCCTTCCCCCTGCTGCCTGCCGTCTCCC
CAGCACCCTTCCCCCTGCTGCCTGCCCACCGCTGTAAGCCGACCCAACGACTGCCTGGCCAATG
TCTGCTGCCCATGGGGGGTGCCAGGCAAAGCCCCCTGGCCGGTGGGGAGAACAGGGGCAAGCAG
GAACTGGTTGGTCGGAACCTGCCTCTCAGCCCCCACTCTGACCCTCACCTCCGACCCCCACTTC
CGACCACCTCTGAGTCCCATCTCCAAGCCCAGTCTGGGAGGCCCCATGTCCTCACCAAAGGCTG
ACACCTGCCCTCCTCTGGGGCCCCTTCCCCCTTTCCTGTCCCTGGTGGCAGTTGACCTTGGGGC
CCGGGCCTCTCCCTTGAGTGCTCTCCCTTTGGGGGTGTGGCTTTCCTGGAGACGTGTCACTGAG
GGAACTGTGGCAAGCCAAGCCGAGGGGGCAGCGTGAGGGCCTTGCCTCTCTAACCACCCGAGGA
TCGGCCGCCAGTGGAGCCCCCCCAGCAGGCGCCTTCGTGCCCTCCCCGCGGTCACCCCTGCTGG
GGCTTTGCCGCCTCTGGTTAACAATGCTTTCTCTGGCCTTTGCATAAACGGGGTCCCAGGGGCC
CCTCCTCAAGAGTCA

hide sequence

Protein Sequences


Protein RefSeqs	XP_020922128	(Get FASTA)	NCBI Sequence Viewer
	XP_020922129	(Get FASTA)	NCBI Sequence Viewer
	XP_020922130	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000052546
	ENSSSCP00000052546.1
	ENSSSCP00015024838.1
	ENSSSCP00015024869.1
	ENSSSCP00015024891.1
	ENSSSCP00025036972.1
	ENSSSCP00030005520.1
	ENSSSCP00035048664.1
	ENSSSCP00035048665.1
	ENSSSCP00035048667.1
	ENSSSCP00040017206.1
	ENSSSCP00040017222.1
	ENSSSCP00040017236.1
	ENSSSCP00045033728.1
	ENSSSCP00045033766.1
	ENSSSCP00045033781.1
	ENSSSCP00060040081.1
	ENSSSCP00060040089.1
	ENSSSCP00060040090.1
	ENSSSCP00065033224.1
	ENSSSCP00070025745.1

RefSeq Acc Id:

XP_020922128 ⟸ XM_021066469

- UniProtKB:

A0A287B8X2 (UniProtKB/TrEMBL), A0A480RQV6 (UniProtKB/TrEMBL), A0A4X1U7N7 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEAGERSPLLAQGAGCQEAPLASSSPLTARRAGPAPWEDQAWRAGLRGVLACPPPAGSSCLKCL
VFLTNCLFSLLGLLALAAGLWGLAVKGSLGRSCGGPLPADPMLGLVLGGLAVSAVSLAGCLGAL
CENAFLLHCFSGGVLAFLVLEAVAGALVAALWGQLQDGLEHVLREAITHYQDDPDLCFLIDQVQ
LGLQCCGAASYQDWQRNPYFNCSSARVQACRLPASCCIDPWEDGASVNDQCGFGALGLGEDGAQ
RRVHLEGCSPQLRQWLHSNIGAIGSCFITVVTVQGAEVLLATQLVRALAVARAQQGGWARPPDP
QTQCPALCQSGLPGRWDRRPGHWDGVWGCRSPFLPPGRCQSDPPGAGTPSALPPAACRLPSTLP
PAACPPL

hide sequence

RefSeq Acc Id:

XP_020922129 ⟸ XM_021066470

- UniProtKB:

A0A287B8X2 (UniProtKB/TrEMBL), A0A480RQV6 (UniProtKB/TrEMBL), A0A4X1U7N7 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEAGERSPLLAQGAGCQEAPLASSSPLTARRAGPAPWEDQAWRAGLRGVLACPPPAGSSCLKCL
VFLTNCLFSLLGLLALAAGLWGLAVKGSLGRSCGGPLPADPMLGLVLGGLAVSAVSLAGCLGAL
CENAFLLHCFSGGVLAFLVLEAVAGALVAALWGQLQDGLEHVLREAITHYQDDPDLCFLIDQVQ
LGLQCCGAASYQDWQRNPYFNCSSARVQACRLPASCCIDPWEDGASVNDQCGFGALGLGEDGAQ
RRVHLEGCSPQLRQWLHSNIGAIGSCFITVVTVQGAEVLLATQLVRALAVARAQQGGWARPPDP
QTQCPALCQSGLPGRWDRRPGHWDGVWGCRSPFLPPGRCQSDPPGAGTPSALPPAACRLPSTLP
PAACPPL

hide sequence

RefSeq Acc Id:

XP_020922130 ⟸ XM_021066471

- UniProtKB:

A0A287B8X2 (UniProtKB/TrEMBL), A0A480RQV6 (UniProtKB/TrEMBL), A0A4X1U7N7 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEAGERSPLLAQGAGCQEAPLASSSPLTARRAGPAPWEDQAWRAGLRGVLACPPPAGSSCLKCL
VFLTNCLFSLLGLLALAAGLWGLAVKGSLGRSCGGPLPADPMLGLVLGGLAVSAVSLAGCLGAL
CENAFLLHCFSGGVLAFLVLEAVAGALVAALWGQLQDGLEHVLREAITHYQDDPDLCFLIDQVQ
LGLQCCGAASYQDWQRNPYFNCSSARVQACRLPASCCIDPWEDGASVNDQCGFGALGLGEDGAQ
RRVHLEGCSPQLRQWLHSNIGAIGSCFITVVTVQGAEVLLATQLVRALAVARAQQGGWARPPDP
QTQCPALCQSGLPGRWDRRPGHWDGVWGCRSPFLPPGRCQSDPPGAGTPSALPPAACRLPSTLP
PAACPPL

hide sequence

RefSeq Acc Id:

ENSSSCP00000052546 ⟸ ENSSSCT00000054383

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000031531	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015046416	UniProtKB/TrEMBL
	ENSSSCG00025062165	UniProtKB/TrEMBL
	ENSSSCG00030008983	UniProtKB/TrEMBL
	ENSSSCG00035081013	UniProtKB/TrEMBL
	ENSSSCG00040030597	UniProtKB/TrEMBL
	ENSSSCG00045028480	UniProtKB/TrEMBL
	ENSSSCG00060067953	UniProtKB/TrEMBL
	ENSSSCG00065055766	UniProtKB/TrEMBL
	ENSSSCG00070015727	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000054383	ENTREZGENE
	ENSSSCT00000054383.3	UniProtKB/TrEMBL
	ENSSSCT00015061868.1	UniProtKB/TrEMBL
	ENSSSCT00015061940.1	UniProtKB/TrEMBL
	ENSSSCT00015062007.1	UniProtKB/TrEMBL
	ENSSSCT00025085064.1	UniProtKB/TrEMBL
	ENSSSCT00030012272.1	UniProtKB/TrEMBL
	ENSSSCT00035111226.1	UniProtKB/TrEMBL
	ENSSSCT00035111227.1	UniProtKB/TrEMBL
	ENSSSCT00035111229.1	UniProtKB/TrEMBL
	ENSSSCT00040041096.1	UniProtKB/TrEMBL
	ENSSSCT00040041125.1	UniProtKB/TrEMBL
	ENSSSCT00040041151.1	UniProtKB/TrEMBL
	ENSSSCT00045048517.1	UniProtKB/TrEMBL
	ENSSSCT00045048567.1	UniProtKB/TrEMBL
	ENSSSCT00045048592.1	UniProtKB/TrEMBL
	ENSSSCT00060092730.1	UniProtKB/TrEMBL
	ENSSSCT00060092742.1	UniProtKB/TrEMBL
	ENSSSCT00060092745.1	UniProtKB/TrEMBL
	ENSSSCT00065076352.1	UniProtKB/TrEMBL
	ENSSSCT00070030864.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.1450.10	UniProtKB/TrEMBL
InterPro	Tetraspanin/Peripherin	UniProtKB/TrEMBL
	Tetraspanin_CS	UniProtKB/TrEMBL
	Tetraspanin_EC2_sf	UniProtKB/TrEMBL
NCBI Gene	TSPAN10	ENTREZGENE
PANTHER	PTHR19282	UniProtKB/TrEMBL
	TETRASPANIN-10	UniProtKB/TrEMBL
Pfam	Tetraspanin	UniProtKB/TrEMBL
PRINTS	TMFOUR	UniProtKB/TrEMBL
PROSITE	TM4_1	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48652	UniProtKB/TrEMBL
UniProt	A0A287B8X2	ENTREZGENE, UniProtKB/TrEMBL
	A0A480RQV6	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1U7N7	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:94499	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar