PTPRE (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 14 | 137,101,555 - 137,264,238 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 14 | 137,101,449 - 137,264,245 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 14 | 149,003,851 - 149,166,646 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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PTPRE (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 10 | 127,907,103 - 128,085,855 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 10 | 127,907,103 - 128,085,855 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 10 | 129,705,367 - 129,884,119 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 10 | 129,595,315 - 129,774,155 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 10 | 129,735,823 - 129,774,155 | NCBI | | | | | Celera | 10 | 123,376,798 - 123,555,655 (+) | NCBI | | Celera | | | Cytogenetic Map | 10 | q26.2 | NCBI | | | | | HuRef | 10 | 123,280,118 - 123,458,889 (+) | NCBI | | HuRef | | | CHM1_1 | 10 | 129,987,736 - 130,166,586 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 10 | 128,805,632 - 128,984,409 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Ptpre (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 7 | 135,139,195 - 135,288,023 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 7 | 135,139,210 - 135,288,022 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 7 | 135,537,824 - 135,686,294 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 7 | 135,537,481 - 135,686,293 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 7 | 142,729,507 - 142,877,977 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 7 | 135,376,167 - 135,524,637 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 7 | 135,360,562 - 135,509,397 (+) | NCBI | | Celera | | | Cytogenetic Map | 7 | F3 | NCBI | | | | | cM Map | 7 | 81.27 | NCBI | | | | |
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Ptpre (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 1 | 199,774,195 - 199,924,646 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 1 | 190,344,331 - 190,494,815 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 190,344,401 - 190,489,534 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 1 | 198,805,668 - 198,845,362 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 205,964,922 - 206,004,597 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 198,638,380 - 198,678,057 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 1 | 207,820,719 - 207,987,123 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 207,887,209 - 207,987,136 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 214,818,446 - 214,920,034 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 1 | 195,263,489 - 195,303,249 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 1 | 195,421,407 - 195,453,236 (+) | NCBI | | | | | Celera | 1 | 188,164,525 - 188,204,261 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | q41 | NCBI | | | | |
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Ptpre (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955477 | 5,688,817 - 5,838,761 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955477 | 5,688,936 - 5,838,264 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PTPRE (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 8 | 139,784,691 - 139,964,075 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 10 | 139,790,073 - 139,969,429 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 10 | 124,494,150 - 124,673,579 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 10 | 128,744,234 - 128,922,584 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 10 | 128,836,367 - 128,922,584 (+) | Ensembl | panpan1.1 | | panPan2 | |
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PTPRE (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 28 | 36,761,314 - 36,904,902 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 28 | 36,746,822 - 36,902,325 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 28 | 36,817,292 - 36,960,135 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 28 | 37,393,213 - 37,536,366 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 28 | 37,394,983 - 37,536,352 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 28 | 36,873,260 - 37,016,307 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 28 | 36,867,997 - 37,011,092 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 28 | 37,122,813 - 37,266,172 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Ptpre (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024407213 | 10,001,450 - 10,130,358 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936486 | 15,484,300 - 15,559,849 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936486 | 15,484,304 - 15,559,842 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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PTPRE (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 9 | 120,511,812 - 120,691,820 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 9 | 120,646,898 - 120,690,230 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666048 | 81,900,758 - 82,082,260 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Ptpre (Heterocephalus glaber - naked mole-rat) |
|