LOC100624894 (receptor-type tyrosine-protein phosphatase V-like) - Rat Genome Database

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Gene: LOC100624894 (receptor-type tyrosine-protein phosphatase V-like) Sus scrofa
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Symbol: LOC100624894
Name: receptor-type tyrosine-protein phosphatase V-like
RGD ID: 14204962
Description: ENCODES a protein that exhibits phosphatase activity (inferred); phosphoprotein phosphatase activity (inferred); protein tyrosine phosphatase activity (inferred); INVOLVED IN dephosphorylation (inferred); peptidyl-tyrosine dephosphorylation (inferred); protein dephosphorylation (inferred); FOUND IN integral component of membrane (inferred); membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11024,338,549 - 24,358,576 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21028,719,224 - 28,736,760 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_021064537   ⟹   XP_020920196
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11024,338,549 - 24,358,576 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021064538   ⟹   XP_020920197
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11024,338,549 - 24,358,575 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021064540   ⟹   XP_020920199
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11024,338,549 - 24,358,575 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021064541   ⟹   XP_020920200
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11024,338,549 - 24,358,575 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_020920196 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920197 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920199 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920200 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_020920196   ⟸   XM_021064537
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_020920199   ⟸   XM_021064540
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_020920197   ⟸   XM_021064538
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_020920200   ⟸   XM_021064541
- Peptide Label: isoform X4
- Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000049544 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSSSCP00000025780 UniProtKB/TrEMBL
  ENSSSCP00000036227 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCP00000061102 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000026320 UniProtKB/TrEMBL
  ENSSSCT00000042636 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCT00000087203 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/TrEMBL
  3.90.190.10 UniProtKB/TrEMBL
InterPro FN3_dom UniProtKB/TrEMBL
  FN3_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Prot-tyrosine_phosphatase-like UniProtKB/TrEMBL
  PTPase_domain UniProtKB/TrEMBL
  PTPRJ_TM UniProtKB/TrEMBL
  Tyr_Pase_AS UniProtKB/TrEMBL
  Tyr_Pase_cat UniProtKB/TrEMBL
  TYR_PHOSPHATASE_dom UniProtKB/TrEMBL
NCBI Gene LOC100624894 ENTREZGENE
Pfam fn3 UniProtKB/TrEMBL
  PTP_tm UniProtKB/TrEMBL
  Y_phosphatase UniProtKB/TrEMBL
PRINTS PRTYPHPHTASE UniProtKB/TrEMBL
PROSITE FN3 UniProtKB/TrEMBL
  TYR_PHOSPHATASE_1 UniProtKB/TrEMBL
  TYR_PHOSPHATASE_2 UniProtKB/TrEMBL
  TYR_PHOSPHATASE_PTP UniProtKB/TrEMBL
SMART FN3 UniProtKB/TrEMBL
  PTPc UniProtKB/TrEMBL
  PTPc_motif UniProtKB/TrEMBL
Superfamily-SCOP SSF49265 UniProtKB/TrEMBL
  SSF52799 UniProtKB/TrEMBL
UniProt A0A286ZXP0_PIG UniProtKB/TrEMBL
  A0A5G2QAQ7_PIG UniProtKB/TrEMBL
  I3LNV5_PIG UniProtKB/TrEMBL