LOC100153886 (olfactory receptor 11H6-like) - Rat Genome Database

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Pathways
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Gene: LOC100153886 (olfactory receptor 11H6-like) Sus scrofa
Analyze
Symbol: LOC100153886
Name: olfactory receptor 11H6-like
RGD ID: 14203558
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); olfactory receptor activity (inferred); INVOLVED IN detection of chemical stimulus involved in sensory perception of smell (inferred); G protein-coupled receptor signaling pathway (inferred); sensory perception of smell (inferred); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1778,639,839 - 78,640,839 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2783,668,254 - 83,669,225 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Variants

.
Variants in LOC100153886
42 total Variants

Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_013989075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000057 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_013989075   ⟹   XP_013844529
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1778,639,839 - 78,640,839 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013844529 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00005024499.1
  ENSSSCP00015026131.1
  ENSSSCP00025033894.1
  ENSSSCP00045006723.1
  ENSSSCP00055013844.1
  ENSSSCP00055031258.1
  ENSSSCP00070032298.1
Reference Protein Sequences
RefSeq Acc Id: XP_013844529   ⟸   XM_013989075
- UniProtKB: A0A4X1UQL3 (UniProtKB/TrEMBL),   A0A8D0JAX7 (UniProtKB/TrEMBL),   A0A8D0NYY3 (UniProtKB/TrEMBL),   A0A8D1Q8P0 (UniProtKB/TrEMBL),   A0A8D1R6M3 (UniProtKB/TrEMBL)
- Sequence:
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00005025255 UniProtKB/TrEMBL
  ENSSSCG00015049084 UniProtKB/TrEMBL
  ENSSSCG00025057157 UniProtKB/TrEMBL
  ENSSSCG00045005932 UniProtKB/TrEMBL
  ENSSSCG00055008956 UniProtKB/TrEMBL
  ENSSSCG00055020066 UniProtKB/TrEMBL
  ENSSSCG00070019521 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00005040001.1 UniProtKB/TrEMBL
  ENSSSCT00015065287.1 UniProtKB/TrEMBL
  ENSSSCT00025078165.1 UniProtKB/TrEMBL
  ENSSSCT00045009861.1 UniProtKB/TrEMBL
  ENSSSCT00055017510.1 UniProtKB/TrEMBL
  ENSSSCT00055039301.1 UniProtKB/TrEMBL
  ENSSSCT00070038588.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
KEGG Report ssc:100153886 UniProtKB/TrEMBL
NCBI Gene LOC100153886 ENTREZGENE
PANTHER G-PROTEIN COUPLED RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR FAMILY 11 SUBFAMILY G MEMBER 9 UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A4X1UQL3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0JAX7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0NYY3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1Q8P0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1R6M3 ENTREZGENE, UniProtKB/TrEMBL