GRPR (gastrin releasing peptide receptor) - Rat Genome Database

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Gene: GRPR (gastrin releasing peptide receptor) Sus scrofa
Analyze
Symbol: GRPR
Name: gastrin releasing peptide receptor
RGD ID: 14202273
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); neuropeptide binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); learning or memory (ortholog); regulation of cell population proliferation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); Memory Disorders (ortholog); FOUND IN membrane (inferred); plasma membrane (inferred); INTERACTS WITH deoxynivalenol
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: gastrin-releasing peptide receptor
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX12,659,776 - 12,696,103 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X12,654,059 - 12,711,417 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X13,603,713 - 13,650,148 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:14681463   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
GRPR
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX12,659,776 - 12,696,103 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X12,654,059 - 12,711,417 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X13,603,713 - 13,650,148 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GRPR
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X16,123,565 - 16,153,518 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX16,123,565 - 16,153,518 (+)EnsemblGRCh38hg38GRCh38
GRCh37X16,141,688 - 16,171,641 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X16,051,345 - 16,081,562 (+)NCBINCBI36Build 36hg18NCBI36
Build 34X15,901,335 - 15,930,598NCBI
CeleraX20,259,707 - 20,289,922 (+)NCBICelera
Cytogenetic MapXp22.2NCBI
HuRefX13,896,945 - 13,927,133 (+)NCBIHuRef
CHM1_1X16,172,364 - 16,202,581 (+)NCBICHM1_1
T2T-CHM13v2.0X15,706,468 - 15,736,420 (+)NCBIT2T-CHM13v2.0
Grpr
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X162,296,900 - 162,332,732 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX162,296,900 - 162,332,673 (-)EnsemblGRCm39 Ensembl
GRCm38X163,513,904 - 163,549,736 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX163,513,904 - 163,549,677 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X159,951,836 - 159,987,579 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X158,858,009 - 158,893,752 (-)NCBIMGSCv36mm8
CeleraX146,739,026 - 146,774,660 (-)NCBICelera
Cytogenetic MapXF5NCBI
cM MapX75.63NCBI
Grpr
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X34,630,238 - 34,670,245 (+)NCBIGRCr8
mRatBN7.2X30,998,425 - 31,038,442 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX30,998,416 - 31,038,442 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX32,038,434 - 32,078,466 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X35,468,323 - 35,508,331 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X31,669,805 - 31,709,843 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X32,746,259 - 32,786,266 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX32,745,873 - 32,786,359 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X33,083,317 - 33,123,324 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X51,743,248 - 51,783,255 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X51,796,714 - 51,836,724 (+)NCBI
CeleraX31,324,305 - 31,364,289 (+)NCBICelera
Cytogenetic MapXq14NCBI
Grpr
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555192,032,500 - 2,063,292 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555192,032,500 - 2,063,292 (-)NCBIChiLan1.0ChiLan1.0
GRPR
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X17,916,672 - 17,960,806 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X17,920,074 - 17,949,208 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X8,744,020 - 8,775,085 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X16,099,778 - 16,131,069 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX16,099,778 - 16,131,069 (+)Ensemblpanpan1.1panPan2
GRPR
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X12,344,704 - 12,381,445 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX12,345,318 - 12,380,915 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX12,194,783 - 12,232,039 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X12,305,424 - 12,342,697 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX12,306,033 - 12,342,171 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X12,374,968 - 12,412,213 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X12,361,417 - 12,398,693 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X12,387,955 - 12,425,227 (+)NCBIUU_Cfam_GSD_1.0
Grpr
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X5,533,131 - 5,565,860 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364705,533,256 - 5,565,869 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364705,533,256 - 5,565,827 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GRPR
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X14,569,771 - 14,599,306 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX14,570,453 - 14,599,258 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605616,425,059 - 16,455,086 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Grpr
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624829907,371 - 939,779 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624829907,386 - 946,385 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in GRPR
776 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system nervous system renal system reproductive system respiratory system
High
Medium
Low 10 2 1 3 16 2 1
Below cutoff 2 2 7 2

Sequence


RefSeq Acc Id: ENSSSCT00000013283   ⟹   ENSSSCP00000012927
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX12,659,776 - 12,696,103 (+)Ensembl
RefSeq Acc Id: NM_001315640   ⟹   NP_001302569
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X12,659,776 - 12,696,103 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001302557
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X12,654,059 - 12,711,417 (+)NCBI
Sequence:
RefSeq Acc Id: NP_001302569   ⟸   NM_001315640
- UniProtKB: K7GR81 (UniProtKB/TrEMBL),   A0A4X1UXD7 (UniProtKB/TrEMBL),   F1SQS5 (UniProtKB/TrEMBL),   A0A8D1G9X7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000012927   ⟸   ENSSSCT00000013283

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000012144 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015050595 UniProtKB/TrEMBL
  ENSSSCG00025008466 UniProtKB/TrEMBL
  ENSSSCG00030068141 UniProtKB/TrEMBL
  ENSSSCG00035040612 UniProtKB/TrEMBL
  ENSSSCG00040076346 UniProtKB/TrEMBL
  ENSSSCG00045031982 UniProtKB/TrEMBL
  ENSSSCG00065028702 UniProtKB/TrEMBL
  ENSSSCG00070020148 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000013283 ENTREZGENE
  ENSSSCT00000013283.5 UniProtKB/TrEMBL
  ENSSSCT00015067486.1 UniProtKB/TrEMBL
  ENSSSCT00025011277.1 UniProtKB/TrEMBL
  ENSSSCT00030095324.1 UniProtKB/TrEMBL
  ENSSSCT00030095346.1 UniProtKB/TrEMBL
  ENSSSCT00035053925.1 UniProtKB/TrEMBL
  ENSSSCT00040106291.1 UniProtKB/TrEMBL
  ENSSSCT00040106292.1 UniProtKB/TrEMBL
  ENSSSCT00045054583.1 UniProtKB/TrEMBL
  ENSSSCT00065038719.1 UniProtKB/TrEMBL
  ENSSSCT00070039963.1 UniProtKB/TrEMBL
  ENSSSCT00070039969.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro Bombsn_rcpt-like UniProtKB/TrEMBL
  Gastrin_pep_rcpt UniProtKB/TrEMBL
  GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
KEGG Report ssc:100517439 UniProtKB/TrEMBL
NCBI Gene GRPR ENTREZGENE
PANTHER GASTRIN-RELEASING PEPTIDE RECEPTOR UniProtKB/TrEMBL
  LEUCOKININ RECEPTOR-RELATED UniProtKB/TrEMBL
Pfam 7tm_1 UniProtKB/TrEMBL
PRINTS BOMBESINR UniProtKB/TrEMBL
  GASTRINRELPR UniProtKB/TrEMBL
  GPCRRHODOPSN UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
SMART 7TM_GPCR_Srsx UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A4X1UXD7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1G978_PIG UniProtKB/TrEMBL
  A0A8D1G9X7 ENTREZGENE, UniProtKB/TrEMBL
  F1SQS5 ENTREZGENE
  K7GR81 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary F1SQS5 UniProtKB/TrEMBL
VGNC ID VGNC:88709 ENTREZGENE