SSTR1 (somatostatin receptor 1) - Rat Genome Database

Name: SSTR1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: SSTR1 (somatostatin receptor 1) Sus scrofa

Analyze

Symbol:

SSTR1

Name:

somatostatin receptor 1

RGD ID:

14201621

Description:

ENCODES a protein that exhibits protein heterodimerization activity; protein homodimerization activity; somatostatin receptor activity (ortholog); INVOLVED IN negative regulation of growth hormone secretion; cellular response to estradiol stimulus (ortholog); cellular response to leukemia inhibitory factor (ortholog); PARTICIPATES IN somatostatin signaling pathway; ASSOCIATED WITH Brain-Lung-Thyroid Syndrome (ortholog); Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); FOUND IN cytoplasm; G protein-coupled receptor heterodimeric complex; G protein-coupled receptor homodimeric complex

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

somatostatin receptor type 1

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SSTR1 (somatostatin receptor 1)	HGNC	EggNOG, Ensembl, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Sstr1 (somatostatin receptor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Sstr1 (somatostatin receptor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Sstr1 (somatostatin receptor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SSTR1 (somatostatin receptor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SSTR1 (somatostatin receptor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Sstr1 (somatostatin receptor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SSTR1 (somatostatin receptor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Sstr1 (somatostatin receptor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	61,890,563 - 61,894,978 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	61,890,560 - 61,900,567 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	66,593,626 - 66,599,948 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Brain-Lung-Thyroid Syndrome (ISO)

Experimental Diabetes Mellitus (ISO)

genetic disease (ISO)

neuroendocrine tumor (ISO)

pancreatic cancer (ISO)

status epilepticus (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to estradiol stimulus (IEA,ISO)

cellular response to leukemia inhibitory factor (IEA,ISO)

cerebellum development (ISO)

forebrain development (ISO)

G protein-coupled receptor signaling pathway (IEA,ISO)

glutamate receptor signaling pathway (IEA,ISO)

negative regulation of growth hormone secretion (IMP)

neuropeptide signaling pathway (IEA,ISO)

response to starvation (ISO)

somatostatin signaling pathway (IEA,ISO)

spermatogenesis (ISO)

Cellular Component

cytoplasm (IDA)

G protein-coupled receptor heterodimeric complex (IDA)

G protein-coupled receptor homodimeric complex (IDA)

membrane (IEA,RCA)

neuron projection (IEA)

plasma membrane (IDA,IEA)

Molecular Function

G protein-coupled receptor activity (IEA)

neuropeptide binding (IEA)

protein binding (ISO)

protein heterodimerization activity (IDA)

protein homodimerization activity (IDA)

somatostatin receptor activity (IEA,ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

somatostatin signaling pathway (ISO)

References

Additional References at PubMed

PMID:16543371	PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

SSTR1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	61,890,563 - 61,894,978 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	61,890,560 - 61,900,567 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	66,593,626 - 66,599,948 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SSTR1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	38,207,904 - 38,213,067 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	38,207,904 - 38,213,067 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	14	38,677,109 - 38,682,272 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	37,746,955 - 37,752,019 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	14	37,746,954 - 37,752,019	NCBI
Celera	14	18,541,740 - 18,546,804 (+)	NCBI		Celera
Cytogenetic Map	14	q21.1	NCBI
HuRef	14	18,792,180 - 18,797,244 (+)	NCBI		HuRef
CHM1_1	14	38,674,961 - 38,680,025 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	14	32,396,603 - 32,401,766 (+)	NCBI		T2T-CHM13v2.0

Sstr1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	58,258,524 - 58,262,822 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	58,258,558 - 58,260,673 (+)	Ensembl		GRCm39 Ensembl
GRCm38	12	58,211,421 - 58,216,037 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	58,211,772 - 58,214,444 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	12	59,312,791 - 59,317,023 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	12	59,129,816 - 59,132,456 (+)	NCBI		MGSCv36	mm8
Celera	12	59,362,952 - 59,367,171 (+)	NCBI		Celera
Cytogenetic Map	12	C1	NCBI
cM Map	12	25.61	NCBI

Sstr1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	81,567,237 - 81,571,759 (+)	NCBI		GRCr8
mRatBN7.2	6	75,832,292 - 75,836,806 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	75,832,530 - 75,836,802 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	6	76,235,331 - 76,239,631 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	76,534,673 - 76,538,973 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	75,962,144 - 75,966,444 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	79,252,914 - 79,258,611 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	79,254,339 - 79,258,611 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	6	88,783,414 - 88,787,997 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	6	78,803,393 - 78,806,978 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	6	78,806,518 - 78,810,104 (+)	NCBI
Celera	6	74,603,631 - 74,607,903 (+)	NCBI		Celera
RH 3.4 Map	6	546.4	RGD
Cytogenetic Map	6	q23	NCBI

Sstr1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955409	22,889,800 - 22,894,480 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955409	22,889,800 - 22,894,480 (-)	NCBI	ChiLan1.0	ChiLan1.0

SSTR1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	39,532,858 - 39,536,701 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	38,749,551 - 38,753,211 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	18,968,969 - 18,973,560 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	37,327,348 - 37,332,961 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	14	37,329,309 - 37,330,484 (+)	Ensembl	panpan1.1		panPan2

SSTR1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	16,571,069 - 16,575,730 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	16,377,472 - 16,378,647 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	16,688,125 - 16,691,797 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	16,688,172 - 16,689,347 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	16,381,728 - 16,382,903 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	16,439,948 - 16,441,123 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	16,740,560 - 16,741,735 (+)	NCBI		UU_Cfam_GSD_1.0

Sstr1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	48,558,403 - 48,563,242 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936494	12,065,473 - 12,066,648 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936494	12,065,388 - 12,067,759 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SSTR1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	15,000,190 - 15,006,757 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	24	15,003,116 - 15,004,291 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666053	4,033,896 - 4,039,724 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Sstr1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624813	7,539,304 - 7,540,479 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624813	7,538,104 - 7,543,836 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in SSTR1
234 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	nervous system
High
Medium		3
Low	4	10
Below cutoff	4	5

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001190231	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013978119	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000056	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF148990	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY138806	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CT990617	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	EU342350	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000002170 ⟹ ENSSSCP00000002119

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	7	61,890,563 - 61,894,978 (-)	Ensembl

RefSeq Acc Id:

NM_001190231 ⟹ NP_001177160

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	7	61,892,956 - 61,894,128 (-)	NCBI

Sequence:

show sequence

ATGTTCCCCAATGGCACCGCCTCCTCTCCCTCCTCTCCTAGCCCCTGCCCGGGCAGCTGCGGCG
AAGGCAGCGGCAGCAGGGGCCCTGGGGCCGGCACTGCAGACGGGATGGAGGAGCCAGGGCGAAA
TGCATCCCAGAACGGGACCTTGAGCGAGGGCCAGGGCAGCGCTATCCTCATCTCTTTCATCTAC
TCCGTGGTGTGCCTGGTGGGGCTGTGTGGGAACTCCATGGTCATCTACGTGATCCTGCGCTATG
CCAAGATGAAGACAGCCACCAACATCTACATCCTCAACCTGGCCATCGCTGATGAGCTGCTCAT
GCTCAGCGTGCCCTTCTTGGTCACCTCCACATTGCTTCGCCACTGGCCCTTCGGTGCACTGCTC
TGCCGCCTCGTGCTCAGCGTGGACGCAGTCAACATGTTCACCAGCATCTACTGTCTTACTGTGC
TTAGCGTGGACCGCTATGTGGCTGTGGTGCACCCCATCAAGGCGGCACGCTACCGCCGGCCCAC
CGTGGCCAAGGTGGTGAATCTGGGCGTGTGGGTGCTATCCCTGCTGGTCATTCTGCCCATCGTG
GTCTTCTCACGCACTGCAGCCAACAGTGACGGCACGGTGGCCTGCAACATGCTCATGCCCGAGC
CTGCCCAGCGCTGGCTGGTGGGCTTCGTGTTGTACACTTTTCTCATGGGCTTCCTGCTGCCGGT
CGGGGCCATCTGCCTGTGCTACGTGCTCATCATTGCCAAAATGCGCATGGTGGCCCTTAAGGCC
GGCTGGCAGCAGCGCAAGCGCTCGGAGCGCAAGATCACCCTGATGGTGATGATGGTGGTAATGG
TGTTTGTCATCTGCTGGATGCCTTTCTATGTGGTGCAGCTGGTCAACGTGTTCGCAGAGCAGGA
CGACGCCACAGTGAGCCAGCTGTCGGTCATCCTTGGCTATGCCAACAGCTGCGCCAACCCCATC
CTTTATGGCTTCCTTTCAGACAACTTCAAGCGCTCGTTCCAGCGCATCCTTTGCCTCAGCTGGA
TGGACAACGCCGCCGAGGAGCCAGTCGACTACTATGCTACAGCCCTCAAGAGCCGCGCCTACAG
CGTGGAGGACTTCCAGCCCGAGAACCTGGAGTCCGGCGGCGTCTTCCGTAATGGCACCTGCACG
TCCCGGATCACTACTCTCTGA

hide sequence

RefSeq Acc Id:

XM_013978119 ⟹ XP_013833573

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	7	61,890,560 - 61,900,567 (-)	NCBI

Sequence:

show sequence

CAAAAAAGATGCTGTCCTGCTATTTCACTGAGAGGCAGTAGGAAAATCAGTGGGCCAGTGTGGG
TTGGCTGAGATTGGTGATGAACTGAACCACAGGCCACCAGGACTGCTGTGAAGGGATGGGGCCT
CCCTGGGAAATGGAGTCCAGCATGGTTCCTTAGCTGCATAGCTGCTTTAGCACTCTGGTGACTT
TCTTATTAGCTGTCATCAGGTTAACTGCTTGATGACAGATGGTCCTGAAGTGACTACCTCTGCT
GTAGGTCATATTGCTGAGCAGTGCTCACCCCTCATGGCCAGCTTGGTTTCATTTGCCCAGATAG
GTGTATATAAACACAATTCTGATGATGCCAGCACAGAGAATGTGCCTTTCATCCCTGGCCCCAG
CCAGCCCTGTACCACTGGCACGAATTAAAGGAGCTCATTTGAGGATCACCATAGACTCCAATTG
GAAAAAAAAACACACACACACACATTAGTAATGATTTTGAAAGAAGCAGCGTTTGAGTTTCTGA
TAATTACTATTCCACCAAACCAACTGGGACACAGGGCTGAAATTAAAAAAAAATGACCTTCCAT
GTATAATGGCTTTCACACTGCATGATACTATTAAATAACCATCATTAGCTACTGAAGTATGTAC
TACCCATTTTCCAGAGGCCTTTCTCTGCCAAGAAATTTAAGACCAAGAATGATCAATGAATGAC
TCATCAGCATGATCATTGTTGATACAGGACATGCAAATTGAAATTATTCAGAAGATTGAAATGT
ATAAGGAATGATACACAGTTATTAAAGCTCTTCTTGCAAGAGGCCCAAAATTCATTCCTTTGCC
TCTACATTTTATGGGTTAGAAAAAAATAGGTCACTATCCATAGGATGCCTTGGAAAAATAGAAC
AAGAAGGTGTTGGGCATTTTTCCAGGTACTGTGCTGGGTGCTGTGGTTATGAAGATAAATAAAA
TATAGCCCCTCTTCTGAGCAAGCGTACAGATTTATAAGAGGGGAAAGACAAGTACACACACAAA
AATCACAGCACAGTGTGATAAATACGGTGATCAAGGTGTCCATCTGGTATATGATAGCGTAGGG
GAGTGTAGCTTGGAGGAGAGAGTTGAGGTAAAGGAGGAAAAGCACTCTGCTTTGAATCTGCAAC
TTCCTAAATTAGGACTTTCATTCTCCTCTTCTTCTTCTTCTTCTTCTTTTTTTTAATATATATT
TTTAGGGCCACATTCACGGCATATGGGGGTTCCCAGTCCAGGGAGTCAAATCAGAGCTATAGCC
ACCAGCCTATGCCACAGCCACAGCAACACCAGATATGAGCCATGTCTGCAGGCTACACAGAAGC
TCATGGCAACACCGGATCCTTAACCCACTGAGTGAGGCCAGGGATCGAACCTGTGTCCTCATGG
GTACAAGTCAGATTTCCAATAGTTTCCACTGAGTCATGATGGGAACTCCTCATCCTCCTCTTCT
TGAAAGCCCTCTTCTTTCTTCTTTCATATGGAGAAATGTTCATTATCACAGAGGCATAGGAAAG
AAAGTAACCAACAAAGGGAGGAATGAAGGACAGGTAACTGTCATGGAGAAAACAAGCTTATCCT
AAGCTTTCTGAGGGCTTAGATACATAATAAATTAAGGAAAAAAATGGTTTGTAATCAAGACATG
AAATTTTGAACTTCTGGCTTCTCATAGGTTGTGCTTTTAACACATTATAACAATCTCATGACTA
CATTAGCGTTCTTGTCTTTTTAGGAAATGTTTGCATTAAATTGAGGTCTGAAGGGAAGGTAGAT
TCCTAACTGGGCTCCTGCTCTTATAATTTTAAAACAGCTGCAACTCCAACCACATGTTGCTTAG
CCCAGAAGCATGCTGGTTTTTGCTTGGTTGTTTTGTTCATGTGCCTTTTGTTTGTTCATGAATT
TGTTCACAGATACAATGTTAAGAAAGAGATGGCTGAAAATATTTGATAGCACTGCATGGCTCAA
AAAACAAAAAAAAAAAAACCCCAAACAACAAAATGGAAAACACTGCATGGCTTACATGCCTCGT
ATCCACCTCAATCTCTCTATTTTATTTAGGTAAAATTCACACGACATAAAATTCATAATTTTAA
CCATTAAAATGTTTGTATTGTATTTTATTAAAGTATACTTGATTTATAATGTGCCAATTTCTGC
TGTACAGCAAAGTGACCCAGTATTTTATATATATATGTATATATACACACATACATTCCTTTTC
TTATATTATCTTCCATCATGGTCTAGTCCAAGAGATTGGATATAGTTTCTTACGCTATATGGTG
GGACCTCATTGCTTATCTATTCTAAACATAATAGTTTGCATCTACTACCCCAAACTCCCAGTCC
ATCCTACTCCCCCCGCCTTGGCAACCACAAGTCTTTCACTATGTCTATGAGTAGGTTTCTGTTT
CATAGATAGGTCCATTTGTGCCATATTTTAGATTCTACATATTAGTGATATTGTTGTGGAAATC
ACAAAAACCATGGCAGTGGAAGGAGACAAATGGTGCTCAGAGATATGGAAAAGCAAGGTTTCTC
TAGCACCAGTGCTGGCTCAGAGGAGTCACCTCCAGAGTCTGAGCACCAGGTCTTTGTTCTGAGC
AACACTTATACATTACAAGGTCTCGATTTTCCCATGTAAGCATCCTGAACCTCCCCCTCCCCTT
CCCCAAGCAGACAGTGTTCCTCCCTAAGAAACTGAGCAAGCAAGGTTACAGAAGCCGAACTGAT
AAGCAATGCTGGGTACATGATTAGCAGGGCTGCTGGCTTGGACATAGGGCGCACAGTTGCTACA
TTATTACAAGAAAGGTGGTATGAGGTGAGCATAGCTGGAAAGGCTTGCAGCTGCCTTTTTAGCC
AAGGGGGGGGGGGTTGTTCCTTAGTTAAAACTCTTAGTTCAATATCATATGGTATTTGTCTTTC
TCTTTCCGACTTACTTCATTTAGTTTGAGAATCTCTAGCTGCATCCATATTGCTATGAATGGCA
TTATTTCATTCTTTTTTATAGCTGAGTAGTATTGCATTATTTTTAACCATTTTAAAGTGCACAG
TTCAGTGGCTTTTAGTACATTCCCAGTGTTATGCAACCACCACCCCTAATTCCAGAAATTTTCA
TAACCTTCCAAAAGAAAGCATAAACCCATGAAGCACTCATTTCCCATTCCCTCTCCCCCTCAAC
CCCTGCCACCTCTAAGCTGCTTTGTCTCTATGGATTTGCCTATTCTGGATGTTCCATATAAATG
GAATCGCACAGTGATGACCTTTATGCCTGGCTTCTTTCACTCTGCATAATGTTTTCAAGGTTCA
TCTATATTATAACTGTTTTGATGCTTCATTCCTATACTTCATTCCTTTTCGTGGATGGATGGTA
AGAAGATGTATCACATTTTGTTTATCCATTCTCGATGGATGGATATTTGGATTGTTCATCTTTT
TGGCTATTATGAATAGTCCTACTCTGAACATTCATGTGCAAGTTTTTCTTCAAGTACCTATGTT
AAGTTTGGGTCATATGGCAATTCTTTGTTTAACTTTTTGAGGAGTCAACAAACATTCTAAAGCC
ACTGCATCATTTTTTTTATGCCCACTGATAACATATAAGGGTTCTAATTTCTCCATATGCTCAA
CGACATTTGTGATTTTTCTTTTCCTTTAAAAAAATTATTATTGGCACCCTAGTGGGAATAAAGT
GGTATCTCATCATCAGCCTCTTTTCATGAGTTAAAAAATCATCATAGAAAATACTTAAGAAACA
AACAAACAAAAAAGCATGCTCAGGTCAGGTATTCAGTTTTCTTCTTTTGTATTTGAGGCTACCA
ATGAATTGAGAGATGTTCCTTAGATCAGCTGCAAAGTGAACATATGAGATCCCAAATAACAGAG
TCGTGCTTTACAGCTCCCATCACCCACTCCCCCTGGAGAAACCATGATCAACGTCAAGGCGTCT
AGATGATGACTGTTGAAATGTCAGCCCCCTGAGGAATAGCCAGGTGTCTTTAGTCAGTGATTGG
CAAAGAAGCATTTAAATCATTATGAAACTTGGCTTGTTAAAAGCTCTTCTGGGGAAAAAAAAGA
CTTTTTAAAAAACGTGATGAACATTTTTTTTCTCCATATGTGCTATATTTTTTAAGGAAAATGA
AATACAACTAACCACAAATTCCACATCCTTCTTAAGATAAATCTGTTGAGATAAAGGCATGGGT
TAAGCAGCCTGGGTCTTAAGAAATTTCACATTTCTTCCTAGCACATTTCTCATTAATAATTCAG
TGTCCATTGCACACATCCCTGTGAGAGTCTGTCATCATTTCTTTTATCTCTGATTGCTATAATC
AACACACTACAAAAGTTATTCTTTTCCTTTCAGGAGCACTTAGTTTTAAGAACTAAAACACATA
CATACAAATGACATCCAGATAAAGCAAGGTGACAAAAGGATTTGTACTTTTTTTTTTCTTTTCA
AATTTCTGCATACATTTCTGCATTCTGCACTGTCTGGTACAAATACCTTCCATGTGGAGTTTAG
TTGCTGTTTAAGTTGGCCTCACCTTAGTGTAAACTGTTCTGTTGGGAAGAGGAGGTAAGCTGAG
ACTCACAGCACAGTGGGAGCCACCTGGTTGAGAGGTGGAACTAACAAAACTAGACACAACGCTA
AGGCTTGAAGAGGCGGGGAAGCACTAGGCTGCTGCAGGTCGTCTTCTGTGAACCAGCACGGTTC
AGAGTAAGACTTGAAGGGGTCTTGGAAAGAATGGGGGAGCTTGATCAGTTGGACTGGAACAACT
GGAAAGCCAAAGGGAGCCCAGACTAGGATGGTGAAAGATCCTAGAAGTCGTCAAAAATCATGAT
AATTGACTTGAAAAAAACAAAACAAAACAAAACACAGTAACTGTTCAGTTCTTAAGTGGTTAGG
GAGACTGGGGCGAGCCGACATTGGTTTCTGCGTCTTCAAGGTTTAGACACAAATCCTGGGACCT
CAGAAAAGGCTGAAATCTCAAGTATTTCACAGAAAGACTTGAAGGTCGTCCTGCTGTTCCTGGA
GTTTGTGGCAGGTCTGGTCACCTGCAAGGTTGGCCCCGACTGGCATCCCAGCTCACCCCGGGCC
TCTCCTCCTCCCGGGCCAGCCAACTCTCTGGGGTACAAAGTACAGCGGAGGAGCTGGCGGAGGC
TTTCGAGCGGCTCAGGCTTTATCTATCCCCAGCGAACACCTAGATTGATTTCCAAAACGGCGCC
TGGCACGTTTCGGGAGGGTGGGGGGAACAACCTCCGGCTCCTTTCATGCTCCCAGCCGCGCATT
TTCCTTTCTGCAGTCGATATTCCTCTGGGAGACGCTGGAGGCTCTGGGCACTACAAGCTTTATT
AAGAGATTCGCAATGGTTTTCTCAGGCCCCTGAACACTCCCGCCTGCGAAGAGCTGCCTGCGGG
ATTGTAACATAGAAACTCCTATCCCACGTTGCTGTCCTTCCTCCTCCTGATGCTGGCGGCTTAG
GGTCAGTTTCCGAGACTCTTAAGAGTATCCGATTGTGCGCCTGTGCTGGGGTCCCGCCCAAGAA
AAGGAGTGGGACCGTGCGGAGAACGTCACCGCGCTGCTAGACCCGCACCGGCACTTTGCACGGG
CCATCTACGCGTCGGTCCGGAGGTAGCGCGCCCTGGCCCCTGCCCGGGCAGCTGCGGCGAAGGC
AGCGGCAGCAGGGGCCCTGGGGCCGGCACTGCAGACGGGATGGAGGAGCCAGGGCGAAATGCAT
CCCAGAACGGGACCTTGAGCGAGGGCCAGGGCAGCGCTATCCTCATCTCTTTCATCTACTCCGT
GGTGTGCCTGGTGGGGCTGTGTGGGAACTCCATGGTCATCTACGTGATCCTGCGCTATGCCAAG
ATGAAGACAGCCACCAACATCTACATCCTCAACCTGGCCATCGCTGATGAGCTGCTCATGCTCA
GCGTGCCCTTCTTGGTCACCTCCACATTGCTTCGCCACTGGCCCTTCGGTGCACTGCTCTGCCG
CCTCGTGCTCAGCGTGGACGCAGTCAACATGTTCACCAGCATCTACTGTCTTACTGTGCTTAGC
GTGGACCGCTATGTGGCTGTGGTGCACCCCATCAAGGCGGCACGCTACCGCCGGCCCACCGTGG
CCAAGGTGGTGAATCTGGGCGTGTGGGTGCTATCCCTGCTGGTCATTCTGCCCATCGTGGTCTT
CTCACGCACTGCAGCCAACAGTGACGGCACGGTGGCCTGCAACATGCTCATGCCCGAGCCTGCC
CAGCGCTGGCTGGTGGGCTTCGTGTTGTACACTTTTCTCATGGGCTTCCTGCTGCCGGTCGGGG
CCATCTGCCTGTGCTACGTGCTCATCATTGCCAAAATGCGCATGGTGGCCCTTAAGGCCGGCTG
GCAGCAGCGCAAGCGCTCGGAGCGCAAGATCACCCTGATGGTGATGATGGTGGTAATGGTGTTT
GTCATCTGCTGGATGCCTTTCTATGTGGTGCAGCTGGTCAACGTGTTCGCAGAGCAGGACGACG
CCACAGTGAGCCAGCTGTCGGTCATCCTTGGCTATGCCAACAGCTGCGCCAACCCCATCCTTTA
TGGCTTCCTTTCAGACAACTTCAAGCGCTCGTTCCAGCGCATCCTTTGCCTCAGCTGGATGGAC
AACGCCGCCGAGGAGCCAGTCGACTACTATGCTACAGCCCTCAAGAGCCGCGCCTACAGCGTGG
AGGACTTCCAGCCCGAGAACCTGGAGTCCGGCGGCGTCTTCCGTAATGGCACCTGCACGTCCCG
GATCACTACTCTCTGAGCCCAGGCCAAGCAGGAGCCTTTCGCCAAGAGAAGAGGAGGAAGAGGA
GGAAGGGAGGCGGGGAGCGAGAGGTGAAAGGATCAGGGTGCGATGGGATGAGTTGGGGTAGGAG
CTTATGCGCTTCAGGTGGAGACCCGGGAAAGGTGCGCGACAAAGGCGGCGTTGGGCGCTTTGCT
TATAAACTGGAAAAGCTAGAGGGCCCCTTTCTCCTCTTTCGCTTCTTCTTCCACTGCGCTTGCA
CTTCTGCACCCCTTTAGGCTCCACACTGCAGTTTCGGTCTTTCTTTCCGCCCCGTCCTGCCAGT
AATGATCATGAACTTAATTAACGTCGCCAACTCAGCCTGACCCTCAGCCCCGCCAGCTGTTATT
TGTGTTTAAGCTGAGGCACGGTTACCGCCGCGGGTTTCCTTCGGGCTGCGTCCCTAGCTCTCCC
TCAGCCGCGCCCTGCCGCGCCCCGCCGCACCCCTCGCTCGCCAGACTCCGCTTGATGCTCCTAG
CGGAGTCTGGAGAGCCACGGCTCTCCCTTTCCGCAGCCCTACTTTAAGGGAAGTCGGACTTGAG
AAGGACCTAGGCAGCTGATCTTTTCTCCCACTCTCGGGGCGAAGGAAGGTGCGCGCTTCCTCGA
GCCCCTCCTCCACTCCCGTTCCACCAGAGCGGAGCCAGGTGCTTAGTAAAATCGGTCCCGCGCT
TCGAACCCCAGGCATTCTGCAGTCCTTATCCAACTTCCTCTTTGGAGCAAAAAGGAGCTGAGAA
CAAGCGACTAGGGTTTTTTTGTTTGTTTTTAAGATTCAGGGTTGGGGGAGGGGGTTGTAATGGA
GGCCAACCTCCCGACCTTATTAAGGGCGCTTCGGGTTTCAAAGACCAAGCTCTGGGCACTCCCA
GGGAACTGGTCTGGGTTGGGCCAGGCAGGCCAGGGCGCAGGGCGCATTTCCCCCAGGGGCCGCC
CAGGAGCAGGGCTGCAGCTCCTCTAGGCTCTGTCCCTCAACCAGCTTCAGGAGGTGCAGATTTA
AGAATAACAATAGACATCGGGCACGGACCTCGGCTGACGCCTTCCTAGCCTCTGCCCATCTGAC
CGCGTCACCGCCACCCGCAGGCTAGGAGTGTGGCCCGCCCTGCCTGAGGACTGCTGCCTTTCAA
GCGGTGCCTAATACGTTATTTTCTTGCTTATCGTATTTATTTATTTATTTAATTGTGTTGTTTG
AAAGATGTAGTTCAGCTTTCCTTTTCTCCACTTGCCTAGCCCAGGGCCTTTTCTTCAGGACACT
GCAGGTGGGGTGGGCGTGGAGGCGGCAGTGGGGGAAAGCTCTCTCTCCAAGACCCCCTCAAAAT
CTCTTTTTGCTAGGCCCTCTTTTCTTACCCTTTCCTCTAGCCTTTTAGTTTTGCTTGTGTCCAG
TAAAGTTTGGAGATTTTTTTGTTCATACTTTTCTTATGTAATTTATTGTTTGTCTTGTAATAAA
TAAATGATAGTGTGGGTGAGCCTCCTCCCAGGCAGAGTGGAAAGTCCGGAAGCCTAGCTTTTAA
TGTCATCCTATACTCACATAGTATATATATATATGTTTATTTTGCTCCCTTGTCATGAGTCCAT
GCAACAGTTGCCAAATACAGTCACTAACAGTGACAGGTGTGAGACTGGCTAGAACACGTTCAGA
TATGAGAGTTCAAGTAGCCCTCAAACTTGGAGCTTCGGAATCTGATCCAGACAGACTTTATCAG
CACCAAGGATGGAGAATGGCCCTGCTTATGTCCCTGCTTCCTCTAGGTTTCAAGCATAGGTGAT
TATAACATACAATCTAGTTAACATCATCCCTTCTTTTGAAGACATTGAAAGTAAAATAATTTGT
GTCTGTGTTTAATCTAACCAACTCCCTTGGAAACCTGAGTAGAGCAAGGACCAATAATTTTACT
TCTTTGTATTTCCTGTATTGCTTTAATATGCTGGCTTGTACATAATAGGCACTAAATACATGTT
TGTTGGCTGATTGTTTAAGTAAACCAGAGTGTATTACAATAATTGGGAGTTCTCAACATCTGGG
GTTCTCAGGTTCCCTCAATGACATGATACACACTGGTTGAAATCACTTTGGAAACATGTTTTGT
GTATTTTGCTTCAAGAACGTTGTGCTTTCCTAAAAGCAGTAACCAAGAGTTAAAATGTCCCCAA
AGTTTTGTTTAATGGACAAATATGCTTTTGGTCATTAATATGAAGGTTTAGATCTGTCATTTAA
AAATAATGCGTATTATTACTCCTTTGAAAATAGATTTTTAATGGTTAAGAACAGAGAGATTTAC
AAATCAAAATCTTGATCATTTTCCTCTTAAGAGGACACAAATCTAGTGCTCTTAACCTGTTACC
ATTGTAATATTAACTTAATAAACAAATGTATTATGTTGTTGCAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001177160	(Get FASTA)	NCBI Sequence Viewer
	XP_013833573	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAG40780	(Get FASTA)	NCBI Sequence Viewer
	AAN35125	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000002119
	ENSSSCP00000002119.2
	ENSSSCP00005041723.1
	ENSSSCP00015005338.1
	ENSSSCP00025022665.1
	ENSSSCP00030047240.1
	ENSSSCP00035009276.1
	ENSSSCP00040019948.1
	ENSSSCP00045041926.1
	ENSSSCP00050012834.1
	ENSSSCP00055033828.1
	ENSSSCP00060014690.1
	ENSSSCP00065003756.1
	ENSSSCP00070013629.1

RefSeq Acc Id:	XP_013833573 ⟸ XM_013978119
- Peptide Label:	isoform X1
- UniProtKB:	A0A8D1U7Z5 (UniProtKB/TrEMBL), F6Q6G5 (UniProtKB/TrEMBL), Q9GKP7 (UniProtKB/TrEMBL), A0A8D0ML55 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEEPGRNASQNGTLSEGQGSAILISFIYSVVCLVGLCGNSMVIYVILRYAKMKTATNIYILNLA IADELLMLSVPFLVTSTLLRHWPFGALLCRLVLSVDAVNMFTSIYCLTVLSVDRYVAVVHPIKA ARYRRPTVAKVVNLGVWVLSLLVILPIVVFSRTAANSDGTVACNMLMPEPAQRWLVGFVLYTFL MGFLLPVGAICLCYVLIIAKMRMVALKAGWQQRKRSERKITLMVMMVVMVFVICWMPFYVVQLV NVFAEQDDATVSQLSVILGYANSCANPILYGFLSDNFKRSFQRILCLSWMDNAAEEPVDYYATA LKSRAYSVEDFQPENLESGGVFRNGTCTSRITTL hide sequence

RefSeq Acc Id:

NP_001177160 ⟸ NM_001190231

- UniProtKB:

Q866U3 (UniProtKB/TrEMBL), A0A4X1TBQ1 (UniProtKB/TrEMBL), Q9GKP7 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MFPNGTASSPSSPSPCPGSCGEGSGSRGPGAGTADGMEEPGRNASQNGTLSEGQGSAILISFIY
SVVCLVGLCGNSMVIYVILRYAKMKTATNIYILNLAIADELLMLSVPFLVTSTLLRHWPFGALL
CRLVLSVDAVNMFTSIYCLTVLSVDRYVAVVHPIKAARYRRPTVAKVVNLGVWVLSLLVILPIV
VFSRTAANSDGTVACNMLMPEPAQRWLVGFVLYTFLMGFLLPVGAICLCYVLIIAKMRMVALKA
GWQQRKRSERKITLMVMMVVMVFVICWMPFYVVQLVNVFAEQDDATVSQLSVILGYANSCANPI
LYGFLSDNFKRSFQRILCLSWMDNAAEEPVDYYATALKSRAYSVEDFQPENLESGGVFRNGTCT
SRITTL

hide sequence

RefSeq Acc Id:

ENSSSCP00000002119 ⟸ ENSSSCT00000002170

Protein Domains

G-protein coupled receptors family 1 profile

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000001938	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00005041902	UniProtKB/TrEMBL
	ENSSSCG00015010484	UniProtKB/TrEMBL
	ENSSSCG00025039212	UniProtKB/TrEMBL
	ENSSSCG00030073121	UniProtKB/TrEMBL
	ENSSSCG00035019079	UniProtKB/TrEMBL
	ENSSSCG00040035539	UniProtKB/TrEMBL
	ENSSSCG00045034846	UniProtKB/TrEMBL
	ENSSSCG00050022805	UniProtKB/TrEMBL
	ENSSSCG00055021630	UniProtKB/TrEMBL
	ENSSSCG00060025306	UniProtKB/TrEMBL
	ENSSSCG00065006634	UniProtKB/TrEMBL
	ENSSSCG00070008517	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000002170	ENTREZGENE
	ENSSSCT00000002170.3	UniProtKB/TrEMBL
	ENSSSCT00005067183.1	UniProtKB/TrEMBL
	ENSSSCT00015013757.1	UniProtKB/TrEMBL
	ENSSSCT00025053231.1	UniProtKB/TrEMBL
	ENSSSCT00030102398.1	UniProtKB/TrEMBL
	ENSSSCT00035024675.1	UniProtKB/TrEMBL
	ENSSSCT00040047718.1	UniProtKB/TrEMBL
	ENSSSCT00045059755.1	UniProtKB/TrEMBL
	ENSSSCT00050030775.1	UniProtKB/TrEMBL
	ENSSSCT00055042488.1	UniProtKB/TrEMBL
	ENSSSCT00060034300.1	UniProtKB/TrEMBL
	ENSSSCT00065008920.1	UniProtKB/TrEMBL
	ENSSSCT00070016457.1	UniProtKB/TrEMBL
Gene3D-CATH	Rhodopsin 7-helix transmembrane proteins	UniProtKB/TrEMBL
InterPro	GPCR_Rhodpsn	UniProtKB/TrEMBL
	GPCR_Rhodpsn_7TM	UniProtKB/TrEMBL
	Somatstn_rcpt	UniProtKB/TrEMBL
	Somatstn_rcpt_1	UniProtKB/TrEMBL
KEGG Report	ssc:397004	UniProtKB/TrEMBL
NCBI Gene	SSTR1	ENTREZGENE
PANTHER	NEUROPEPTIDES RECEPTOR	UniProtKB/TrEMBL
	SOMATOSTATIN RECEPTOR TYPE 1	UniProtKB/TrEMBL
Pfam	7tm_1	UniProtKB/TrEMBL
PRINTS	GPCRRHODOPSN	UniProtKB/TrEMBL
	SOMATOSTATNR	UniProtKB/TrEMBL
	SOMATOSTTN1R	UniProtKB/TrEMBL
PROSITE	G_PROTEIN_RECEP_F1_1	UniProtKB/TrEMBL
	G_PROTEIN_RECEP_F1_2	UniProtKB/TrEMBL
SMART	7TM_GPCR_Srsx	UniProtKB/TrEMBL
Superfamily-SCOP	Family A G protein-coupled receptor-like	UniProtKB/TrEMBL
UniProt	A0A4X1TBQ1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0ML55	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1U7Z5	ENTREZGENE, UniProtKB/TrEMBL
	F6Q6G5	ENTREZGENE
	Q866U3	ENTREZGENE, UniProtKB/TrEMBL
	Q9GKP7	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	F6Q6G5	UniProtKB/TrEMBL
VGNC ID	VGNC:93496	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

RGD Manual Annotations

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

RGD Manual Annotations