DCTPP1 (dCTP pyrophosphatase 1) - Rat Genome Database

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Gene: DCTPP1 (dCTP pyrophosphatase 1) Sus scrofa
Analyze
Symbol: DCTPP1
Name: dCTP pyrophosphatase 1
RGD ID: 14194538
Description: ENCODES a protein that exhibits dCTP diphosphatase activity (inferred); hydrolase activity (inferred); identical protein binding (inferred); INVOLVED IN dTTP catabolic process (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); FOUND IN mitochondrion (ortholog); nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl317,886,890 - 17,900,557 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1317,896,426 - 17,900,562 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2318,312,086 - 18,316,024 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)
cytosol  (IBA,IEA)
mitochondrion  (IEA,ISO)
nucleoplasm  (IEA)
nucleus  (IEA,ISO)

References
Additional References at PubMed
PMID:14681463   PMID:17145712   PMID:22301074  


Genomics

Comparative Map Data
DCTPP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl317,886,890 - 17,900,557 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1317,896,426 - 17,900,562 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2318,312,086 - 18,316,024 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DCTPP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381630,423,615 - 30,430,030 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1630,423,615 - 30,430,030 (-)EnsemblGRCh38hg38GRCh38
GRCh371630,434,936 - 30,441,351 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361630,342,520 - 30,348,874 (-)NCBINCBI36Build 36hg18NCBI36
Celera1629,857,548 - 29,863,885 (+)NCBICelera
Cytogenetic Map16p11.2NCBI
HuRef1627,997,232 - 28,003,588 (-)NCBIHuRef
CHM1_11631,751,466 - 31,757,820 (-)NCBICHM1_1
T2T-CHM13v2.01630,809,819 - 30,816,234 (-)NCBIT2T-CHM13v2.0
Dctpp1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397126,856,131 - 126,859,839 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7126,856,131 - 126,859,881 (-)EnsemblGRCm39 Ensembl
GRCm387127,256,959 - 127,260,667 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7127,256,959 - 127,260,709 (-)EnsemblGRCm38mm10GRCm38
MGSCv377134,400,473 - 134,404,181 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367127,048,107 - 127,051,815 (-)NCBIMGSCv36mm8
Celera7127,105,674 - 127,109,383 (-)NCBICelera
Cytogenetic Map7F3NCBI
cM Map769.42NCBI
Dctpp1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81191,307,933 - 191,311,326 (-)NCBIGRCr8
mRatBN7.21181,877,440 - 181,880,833 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1181,877,437 - 181,880,839 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1190,228,131 - 190,231,512 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01197,414,218 - 197,417,599 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01190,082,593 - 190,085,974 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01198,703,459 - 198,706,852 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1198,703,461 - 198,706,852 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01205,696,305 - 205,699,698 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41186,519,955 - 186,523,348 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11186,669,837 - 186,673,229 (-)NCBI
Celera1179,528,917 - 179,532,300 (-)NCBICelera
Cytogenetic Map1q37NCBI
Dctpp1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554937,357,204 - 7,360,034 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554937,357,204 - 7,360,034 (-)NCBIChiLan1.0ChiLan1.0
DCTPP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21833,629,486 - 33,636,121 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11638,430,932 - 38,438,331 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01624,538,023 - 24,545,426 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11630,794,268 - 30,802,207 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1630,794,268 - 30,802,179 (-)Ensemblpanpan1.1panPan2
DCTPP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1617,679,681 - 17,683,644 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl617,679,722 - 17,683,570 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha619,253,648 - 19,257,592 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0617,810,663 - 17,814,594 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl617,810,709 - 17,814,520 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1617,610,846 - 17,614,777 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0617,526,330 - 17,530,261 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0617,841,310 - 17,845,272 (+)NCBIUU_Cfam_GSD_1.0
Dctpp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344124,782,876 - 124,786,371 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493650112,879,241 - 12,884,287 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493650112,880,745 - 12,884,240 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DCTPP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1527,096,489 - 27,102,778 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl527,096,212 - 27,102,835 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660682,416,903 - 2,423,222 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in DCTPP1
145 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 23 3 2 5 14 12 23 3 6 3

Sequence


Ensembl Acc Id: ENSSSCT00000008543   ⟹   ENSSSCP00000008324
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl317,886,890 - 17,900,557 (+)Ensembl
RefSeq Acc Id: XM_003354540   ⟹   XP_003354588
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1317,896,426 - 17,900,562 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003354588 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000008324
  ENSSSCP00000008324.3
  ENSSSCP00015030173.1
  ENSSSCP00025032409.1
  ENSSSCP00030043978.1
  ENSSSCP00045025789.1
  ENSSSCP00065010161.1
RefSeq Acc Id: XP_003354588   ⟸   XM_003354540
- UniProtKB: F1RG63 (UniProtKB/TrEMBL),   A0A8D1HZY4 (UniProtKB/TrEMBL),   A0A8D0JNL3 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000008324   ⟸   ENSSSCT00000008543


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000007795 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015056436 UniProtKB/TrEMBL
  ENSSSCG00025054650 UniProtKB/TrEMBL
  ENSSSCG00030068237 UniProtKB/TrEMBL
  ENSSSCG00045021681 UniProtKB/TrEMBL
  ENSSSCG00065018739 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000008543 ENTREZGENE
  ENSSSCT00000008543.5 UniProtKB/TrEMBL
  ENSSSCT00015075240.1 UniProtKB/TrEMBL
  ENSSSCT00025074764.1 UniProtKB/TrEMBL
  ENSSSCT00030095435.1 UniProtKB/TrEMBL
  ENSSSCT00045037062.1 UniProtKB/TrEMBL
  ENSSSCT00065024894.1 UniProtKB/TrEMBL
Gene3D-CATH MazG-like UniProtKB/TrEMBL
InterPro dCTP_Pyrophosphatase UniProtKB/TrEMBL
  DCTPP UniProtKB/TrEMBL
KEGG Report ssc:100621901 UniProtKB/TrEMBL
NCBI Gene DCTPP1 ENTREZGENE
PANTHER DCTP PYROPHOSPHATASE 1 UniProtKB/TrEMBL
  DCTP PYROPHOSPHATASE 1 UniProtKB/TrEMBL
Pfam MazG-like UniProtKB/TrEMBL
Superfamily-SCOP all-alpha NTP pyrophosphatases UniProtKB/TrEMBL
UniProt A0A8D0JNL3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1HZY4 ENTREZGENE, UniProtKB/TrEMBL
  F1RG63 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:109442 ENTREZGENE