LOC110256054 (wiskott-Aldrich syndrome protein family member 1-like) - Rat Genome Database

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Gene: LOC110256054 (wiskott-Aldrich syndrome protein family member 1-like) Sus scrofa
Analyze
No known orthologs.
Symbol: LOC110256054
Name: wiskott-Aldrich syndrome protein family member 1-like
RGD ID: 14193079
Description: ENCODES a protein that exhibits actin binding (inferred); INVOLVED IN actin cytoskeleton organization (inferred); FOUND IN cytoplasm (inferred); cytoskeleton (inferred)
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOW QUALITY PROTEIN: wiskott-Aldrich syndrome protein family member 1-like
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11241,049,943 - 41,076,524 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

nervous system
High
Medium
Low
Below cutoff 12

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_021067439 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_021067439   ⟹   XP_020923098
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11241,049,943 - 41,076,524 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_020923098 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_020923098   ⟸   XM_021067439
- Sequence:
Protein Domains
WH2


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000031620 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSSSCP00000042424 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCP00000062288 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000063084 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCT00000067344 UniProtKB/TrEMBL
InterPro SCAR/WAVE_fam UniProtKB/TrEMBL
  WH2_dom UniProtKB/TrEMBL
NCBI Gene LOC110256054 ENTREZGENE
PANTHER PTHR12902 UniProtKB/TrEMBL
Pfam WH2 UniProtKB/TrEMBL
PROSITE WH2 UniProtKB/TrEMBL
SMART WH2 UniProtKB/TrEMBL
UniProt A0A287AF20_PIG UniProtKB/TrEMBL
  A0A5G2QDR9_PIG UniProtKB/TrEMBL