DMPK (DM1 protein kinase) - Rat Genome Database

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Gene: DMPK (DM1 protein kinase) Sus scrofa
Analyze
Symbol: DMPK
Name: DM1 protein kinase
RGD ID: 14188379
Description: ENCODES a protein that exhibits ATP binding (inferred); myosin phosphatase regulator activity (inferred); protein serine/threonine kinase activity (inferred); INVOLVED IN regulation of excitatory postsynaptic membrane potential involved in skeletal muscle contraction (ortholog); regulation of sodium ion transport (ortholog); ASSOCIATED WITH catecholaminergic polymorphic ventricular tachycardia 1 (ortholog); genetic disease (ortholog); Myotonia (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum membrane (ortholog); nuclear membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: dystrophia myotonica protein kinase; myotonin-protein kinase
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl652,100,259 - 52,110,478 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1652,100,259 - 52,110,822 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:14681463   PMID:17145712   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
DMPK
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl652,100,259 - 52,110,478 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1652,100,259 - 52,110,822 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
DMPK
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381945,769,709 - 45,782,490 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1945,769,709 - 45,782,552 (-)EnsemblGRCh38hg38GRCh38
GRCh371946,272,967 - 46,285,748 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361950,964,815 - 50,977,655 (-)NCBINCBI36Build 36hg18NCBI36
Build 341950,964,815 - 50,977,576NCBI
Celera1943,079,095 - 43,090,866 (-)NCBICelera
Cytogenetic Map19q13.32NCBI
HuRef1942,701,722 - 42,714,534 (-)NCBIHuRef
CHM1_11946,276,489 - 46,288,326 (-)NCBICHM1_1
T2T-CHM13v2.01948,597,244 - 48,609,980 (-)NCBIT2T-CHM13v2.0
Dmpk
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39718,817,571 - 18,827,746 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl718,817,774 - 18,827,746 (+)EnsemblGRCm39 Ensembl
GRCm38719,083,646 - 19,093,821 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl719,083,849 - 19,093,821 (+)EnsemblGRCm38mm10GRCm38
MGSCv37719,669,198 - 19,679,170 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36718,242,517 - 18,251,624 (+)NCBIMGSCv36mm8
Celera716,495,229 - 16,505,182 (+)NCBICelera
Cytogenetic Map7A3NCBI
cM Map79.46NCBI
Dmpk
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8187,858,294 - 87,868,624 (+)NCBIGRCr8
mRatBN7.2178,730,255 - 78,740,585 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl178,730,275 - 78,740,593 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx184,119,202 - 84,129,502 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0192,676,889 - 92,687,183 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0185,874,300 - 85,884,600 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0179,988,096 - 79,999,358 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl179,989,019 - 79,999,364 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0181,257,000 - 81,267,133 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4178,449,324 - 78,450,578 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1178,518,239 - 78,529,227 (+)NCBI
Celera173,194,993 - 73,206,254 (+)NCBICelera
Cytogenetic Map1q21NCBI
Dmpk
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955574226,292 - 237,526 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955574225,615 - 237,526 (-)NCBIChiLan1.0ChiLan1.0
DMPK
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22051,935,294 - 51,948,741 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11953,806,747 - 53,819,563 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01942,779,173 - 42,791,981 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11951,316,099 - 51,329,421 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1951,316,099 - 51,329,355 (-)Ensemblpanpan1.1panPan2
DMPK
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11109,824,103 - 109,834,986 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1109,824,597 - 109,834,976 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1109,309,270 - 109,320,016 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01110,357,335 - 110,368,093 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1110,357,272 - 110,368,093 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11110,032,956 - 110,043,712 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01109,667,626 - 109,678,376 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01110,536,417 - 110,547,165 (+)NCBIUU_Cfam_GSD_1.0
Dmpk
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934917,777,894 - 17,788,794 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367062,124,238 - 2,134,976 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367062,125,237 - 2,135,974 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DMPK
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1639,219,625 - 39,232,203 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl639,220,355 - 39,232,015 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607318,852,196 - 18,865,776 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dmpk
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248327,419,689 - 7,429,084 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248327,419,529 - 7,429,744 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in DMPK
29 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 2 2 2 1
Low 8 2 3 5 23 2 2 1
Below cutoff

Sequence


RefSeq Acc Id: ENSSSCT00000022463   ⟹   ENSSSCP00000020703
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl652,100,265 - 52,110,059 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000053674   ⟹   ENSSSCP00000039396
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl652,100,261 - 52,110,059 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000064752   ⟹   ENSSSCP00000055796
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl652,100,265 - 52,110,204 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000094837   ⟹   ENSSSCP00000079843
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl652,100,264 - 52,110,059 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000096440   ⟹   ENSSSCP00000076257
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl652,100,259 - 52,110,059 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000100551   ⟹   ENSSSCP00000078466
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl652,101,002 - 52,110,478 (-)Ensembl
RefSeq Acc Id: XM_021094583   ⟹   XP_020950242
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1652,100,259 - 52,110,822 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021094584   ⟹   XP_020950243
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1652,100,259 - 52,110,822 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021094585   ⟹   XP_020950244
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1652,100,259 - 52,110,822 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021094586   ⟹   XP_020950245
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1652,100,259 - 52,110,822 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021094587   ⟹   XP_020950246
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1652,100,259 - 52,110,822 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021094588   ⟹   XP_020950247
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1652,101,023 - 52,110,822 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021094589   ⟹   XP_020950248
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1652,100,259 - 52,110,822 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021094590   ⟹   XP_020950249
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1652,100,259 - 52,110,822 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021094591   ⟹   XP_020950250
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1652,100,259 - 52,110,822 (-)NCBI
Sequence:
RefSeq Acc Id: XR_002344694
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1652,100,259 - 52,110,822 (-)NCBI
Sequence:
RefSeq Acc Id: XR_002344695
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1652,100,259 - 52,110,822 (-)NCBI
Sequence:
RefSeq Acc Id: XP_020950250   ⟸   XM_021094591
- Peptide Label: isoform X9
- UniProtKB: A0A4X1W110 (UniProtKB/TrEMBL),   A0A8D1JUN9 (UniProtKB/TrEMBL),   A0A8D0JDX4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020950244   ⟸   XM_021094585
- Peptide Label: isoform X3
- UniProtKB: A0A8D0NVT5 (UniProtKB/TrEMBL),   A0A8D0JDR7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020950246   ⟸   XM_021094587
- Peptide Label: isoform X5
- UniProtKB: A0A480K006 (UniProtKB/TrEMBL),   A0A8D1FQC4 (UniProtKB/TrEMBL),   A0A8W4FHV9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020950248   ⟸   XM_021094589
- Peptide Label: isoform X7
- UniProtKB: A0A8D1JUN9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020950249   ⟸   XM_021094590
- Peptide Label: isoform X8
- UniProtKB: A0A287BHF8 (UniProtKB/TrEMBL),   A0A8D1JUN9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020950243   ⟸   XM_021094584
- Peptide Label: isoform X2
- UniProtKB: A0A480LEI1 (UniProtKB/TrEMBL),   A0A4X1W3J6 (UniProtKB/TrEMBL),   A0A8D0JDR7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020950245   ⟸   XM_021094586
- Peptide Label: isoform X4
- UniProtKB: A0A480K0B0 (UniProtKB/TrEMBL),   A0A4X1W1T4 (UniProtKB/TrEMBL),   A0A8D1FQC4 (UniProtKB/TrEMBL),   A0A8W4FHV9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020950242   ⟸   XM_021094583
- Peptide Label: isoform X1
- UniProtKB: A0A8D1FQC4 (UniProtKB/TrEMBL),   A0A8W4FHV9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020950247   ⟸   XM_021094588
- Peptide Label: isoform X6
- UniProtKB: A0A8D1JUN9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000055796   ⟸   ENSSSCT00000064752
RefSeq Acc Id: ENSSSCP00000020703   ⟸   ENSSSCT00000022463
RefSeq Acc Id: ENSSSCP00000039396   ⟸   ENSSSCT00000053674
RefSeq Acc Id: ENSSSCP00000076257   ⟸   ENSSSCT00000096440
RefSeq Acc Id: ENSSSCP00000078466   ⟸   ENSSSCT00000100551
RefSeq Acc Id: ENSSSCP00000079843   ⟸   ENSSSCT00000094837

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000038969 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00005027415 UniProtKB/TrEMBL
  ENSSSCG00015045854 UniProtKB/TrEMBL
  ENSSSCG00025017006 UniProtKB/TrEMBL
  ENSSSCG00030055691 UniProtKB/TrEMBL
  ENSSSCG00035063286 UniProtKB/TrEMBL
  ENSSSCG00040066277 UniProtKB/TrEMBL
  ENSSSCG00045009045 UniProtKB/TrEMBL
  ENSSSCG00050007267 UniProtKB/TrEMBL
  ENSSSCG00055008416 UniProtKB/TrEMBL
  ENSSSCG00060016449 UniProtKB/TrEMBL
  ENSSSCG00065003841 UniProtKB/TrEMBL
  ENSSSCG00070028233 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000022463 ENTREZGENE
  ENSSSCT00000022463.4 UniProtKB/TrEMBL
  ENSSSCT00000053674 ENTREZGENE
  ENSSSCT00000053674.3 UniProtKB/TrEMBL
  ENSSSCT00000064752 ENTREZGENE
  ENSSSCT00000064752.3 UniProtKB/TrEMBL
  ENSSSCT00000094837 ENTREZGENE
  ENSSSCT00000094837.1 UniProtKB/TrEMBL
  ENSSSCT00000096440.1 UniProtKB/TrEMBL
  ENSSSCT00000100551 ENTREZGENE
  ENSSSCT00000100551.1 UniProtKB/TrEMBL
  ENSSSCT00005043668.1 UniProtKB/TrEMBL
  ENSSSCT00005043789.1 UniProtKB/TrEMBL
  ENSSSCT00015061228.1 UniProtKB/TrEMBL
  ENSSSCT00015061556.1 UniProtKB/TrEMBL
  ENSSSCT00025022935.1 UniProtKB/TrEMBL
  ENSSSCT00030077896.1 UniProtKB/TrEMBL
  ENSSSCT00035085087.1 UniProtKB/TrEMBL
  ENSSSCT00035085114.1 UniProtKB/TrEMBL
  ENSSSCT00040090505.1 UniProtKB/TrEMBL
  ENSSSCT00040090891.1 UniProtKB/TrEMBL
  ENSSSCT00045015327.1 UniProtKB/TrEMBL
  ENSSSCT00045015541.1 UniProtKB/TrEMBL
  ENSSSCT00050009923.1 UniProtKB/TrEMBL
  ENSSSCT00055016490.1 UniProtKB/TrEMBL
  ENSSSCT00060021941.1 UniProtKB/TrEMBL
  ENSSSCT00060021961.1 UniProtKB/TrEMBL
  ENSSSCT00065005248.1 UniProtKB/TrEMBL
  ENSSSCT00070056622.1 UniProtKB/TrEMBL
  ENSSSCT00070056623.1 UniProtKB/TrEMBL
  ENSSSCT00070056624.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.5.340 UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro AGC-kinase_C UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/TrEMBL
  Myotonic_dystrophy_kinase_coil UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/TrEMBL
NCBI Gene DMPK ENTREZGENE
PANTHER MYOTONIC DYSTROPHY S/T KINASE-RELATED UniProtKB/TrEMBL
  NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE UniProtKB/TrEMBL
Pfam DMPK_coil UniProtKB/TrEMBL
  Pkinase UniProtKB/TrEMBL
PROSITE AGC_KINASE_CTER UniProtKB/TrEMBL
  PROTEIN_KINASE_ATP UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/TrEMBL
SMART S_TK_X UniProtKB/TrEMBL
  S_TKc UniProtKB/TrEMBL
Superfamily-SCOP SSF56112 UniProtKB/TrEMBL
UniProt A0A287A6K5_PIG UniProtKB/TrEMBL
  A0A287BHF8 ENTREZGENE, UniProtKB/TrEMBL
  A0A480K006 ENTREZGENE, UniProtKB/TrEMBL
  A0A480K0B0 ENTREZGENE, UniProtKB/TrEMBL
  A0A480LEI1 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1W110 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1W1T4 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1W3J6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0JDR7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0JDX4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0NVT5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1FQC4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1JUN9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8W4FAF3_PIG UniProtKB/TrEMBL
  A0A8W4FHV9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8W4FLS1_PIG UniProtKB/TrEMBL
  I3L9J1_PIG UniProtKB/TrEMBL
VGNC ID VGNC:87349 ENTREZGENE