NKAIN2 (sodium/potassium transporting ATPase interacting 2) - Rat Genome Database

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Gene: NKAIN2 (sodium/potassium transporting ATPase interacting 2) Sus scrofa
Analyze
Symbol: NKAIN2
Name: sodium/potassium transporting ATPase interacting 2
RGD ID: 14188268
Description: INVOLVED IN regulation of sodium ion transport (inferred); ASSOCIATED WITH genetic disease (ortholog); FOUND IN plasma membrane (inferred); INTERACTS WITH deoxynivalenol
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Na+/K+ transporting ATPase interacting 2; sodium/potassium-transporting ATPase subunit beta-1-interacting protein 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl138,014,255 - 39,040,605 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1138,014,252 - 39,040,215 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2142,053,739 - 42,198,706 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
NKAIN2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl138,014,255 - 39,040,605 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1138,014,252 - 39,040,215 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2142,053,739 - 42,198,706 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NKAIN2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386123,803,865 - 124,825,640 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl6123,803,865 - 124,825,640 (+)EnsemblGRCh38hg38GRCh38
GRCh376124,125,010 - 125,146,786 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 366124,166,768 - 125,188,485 (+)NCBINCBI36Build 36hg18NCBI36
Build 346124,166,987 - 125,188,485NCBI
Celera6124,869,958 - 125,891,802 (+)NCBICelera
Cytogenetic Map6q22.31NCBI
HuRef6121,702,429 - 122,723,736 (+)NCBIHuRef
CHM1_16124,388,612 - 125,410,248 (+)NCBICHM1_1
T2T-CHM13v2.06124,991,747 - 126,013,690 (+)NCBIT2T-CHM13v2.0
Nkain2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391031,565,314 - 32,773,170 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1031,565,306 - 32,766,458 (-)EnsemblGRCm39 Ensembl
GRCm381031,689,310 - 32,897,174 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1031,689,310 - 32,890,462 (-)EnsemblGRCm38mm10GRCm38
MGSCv371031,409,125 - 32,609,721 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361031,378,735 - 32,579,264 (-)NCBIMGSCv36mm8
Celera1032,612,553 - 33,799,322 (-)NCBICelera
Cytogenetic Map10A4NCBI
cM Map1017.56NCBI
Nkain2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8126,488,381 - 27,696,134 (+)NCBIGRCr8
mRatBN7.2124,668,627 - 25,877,051 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl124,669,462 - 25,877,064 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0127,473,251 - 28,161,521 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl127,476,375 - 28,159,290 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0128,926,594 - 29,615,541 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera123,895,595 - 24,572,547 (+)NCBICelera
Cytogenetic Map1p11NCBI
Nkain2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554365,407,773 - 6,343,953 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554365,407,642 - 6,345,015 (+)NCBIChiLan1.0ChiLan1.0
NKAIN2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25143,793,042 - 144,817,344 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16141,700,135 - 142,776,468 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v06121,590,732 - 122,611,445 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.16125,713,030 - 126,732,080 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6125,713,247 - 126,729,668 (+)Ensemblpanpan1.1panPan2
NKAIN2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1163,091,956 - 63,857,512 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl162,910,841 - 63,858,164 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha163,719,503 - 64,668,404 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0163,115,179 - 64,065,713 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl163,115,326 - 64,065,725 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1163,047,299 - 63,997,590 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0162,836,039 - 63,786,131 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0163,484,826 - 64,435,218 (+)NCBIUU_Cfam_GSD_1.0
NKAIN2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11348,876,514 - 50,121,382 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604021,185,910 - 22,296,563 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nkain2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247986,687,807 - 7,619,303 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247986,685,647 - 7,619,436 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in NKAIN2
26361 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system nervous system reproductive system respiratory system
High
Medium 19
Low 1 2 1
Below cutoff 3 1 2 2 2 1 1

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_021072767 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021072781 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021072786 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021072794 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021072801 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021072806 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021072809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002338457 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002338458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002338465 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002338466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002338467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002338468 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002338469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002338480 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002338481 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002338482 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002338484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002338499 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002338500 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002338504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU407243 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSSSCT00000046717   ⟹   ENSSSCP00000047366
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl138,014,254 - 38,310,651 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000050380   ⟹   ENSSSCP00000057668
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl138,489,061 - 38,648,918 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000086076   ⟹   ENSSSCP00000070325
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl138,158,690 - 39,040,605 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000086190   ⟹   ENSSSCP00000069048
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl138,014,255 - 39,040,605 (-)Ensembl
RefSeq Acc Id: XM_021072767   ⟹   XP_020928426
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1138,014,252 - 38,837,006 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021072781   ⟹   XP_020928440
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1138,014,258 - 38,837,006 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021072786   ⟹   XP_020928445
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1138,020,386 - 38,837,006 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021072794   ⟹   XP_020928453
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1138,014,258 - 38,837,006 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021072801   ⟹   XP_020928460
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1138,014,253 - 39,040,215 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021072806   ⟹   XP_020928465
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1138,014,254 - 39,040,165 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021072809   ⟹   XP_020928468
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1138,020,386 - 38,837,006 (-)NCBI
Sequence:
RefSeq Acc Id: XR_002338457
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1138,014,252 - 38,837,006 (-)NCBI
Sequence:
RefSeq Acc Id: XR_002338458
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1138,014,252 - 39,040,043 (-)NCBI
Sequence:
RefSeq Acc Id: XR_002338465
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1138,014,252 - 39,040,206 (-)NCBI
Sequence:
RefSeq Acc Id: XR_002338466
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1138,014,252 - 38,567,534 (-)NCBI
Sequence:
RefSeq Acc Id: XR_002338467
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1138,014,252 - 38,570,295 (-)NCBI
Sequence:
RefSeq Acc Id: XR_002338468
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1138,014,258 - 38,837,006 (-)NCBI
Sequence:
RefSeq Acc Id: XR_002338469
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1138,014,252 - 38,837,006 (-)NCBI
Sequence:
RefSeq Acc Id: XR_002338480
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1138,014,255 - 38,837,006 (-)NCBI
Sequence:
RefSeq Acc Id: XR_002338481
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1138,014,252 - 39,040,198 (-)NCBI
Sequence:
RefSeq Acc Id: XR_002338482
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1138,014,255 - 38,732,197 (-)NCBI
Sequence:
RefSeq Acc Id: XR_002338484
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1138,014,252 - 39,040,043 (-)NCBI
Sequence:
RefSeq Acc Id: XR_002338499
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1138,014,252 - 39,040,043 (-)NCBI
Sequence:
RefSeq Acc Id: XR_002338500
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1138,014,252 - 38,837,006 (-)NCBI
Sequence:
RefSeq Acc Id: XR_002338504
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1138,019,701 - 38,837,006 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: XP_020928426   ⟸   XM_021072767
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_020928460   ⟸   XM_021072801
- Peptide Label: isoform X5
- UniProtKB: A0A4X1TQB7 (UniProtKB/TrEMBL),   A0A5G2QY30 (UniProtKB/TrEMBL),   A0A8D0MFV3 (UniProtKB/TrEMBL),   A0A8D0X1U9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020928465   ⟸   XM_021072806
- Peptide Label: isoform X5
- UniProtKB: A0A4X1TQB7 (UniProtKB/TrEMBL),   A0A5G2QY30 (UniProtKB/TrEMBL),   A0A8D0MFV3 (UniProtKB/TrEMBL),   A0A8D0X1U9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020928453   ⟸   XM_021072794
- Peptide Label: isoform X4
- UniProtKB: A0A8D0MFV3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020928440   ⟸   XM_021072781
- Peptide Label: isoform X2
- UniProtKB: A0A8D0MFV3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020928468   ⟸   XM_021072809
- Peptide Label: isoform X6
- UniProtKB: A0A8D0MFV3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020928445   ⟸   XM_021072786
- Peptide Label: isoform X3
- UniProtKB: A0A8D0MFV3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000057668   ⟸   ENSSSCT00000050380
RefSeq Acc Id: ENSSSCP00000070325   ⟸   ENSSSCT00000086076
RefSeq Acc Id: ENSSSCP00000069048   ⟸   ENSSSCT00000086190
RefSeq Acc Id: ENSSSCP00000047366   ⟸   ENSSSCT00000046717


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000036607 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00005028417 UniProtKB/TrEMBL
  ENSSSCG00015004962 UniProtKB/TrEMBL
  ENSSSCG00025067459 UniProtKB/TrEMBL
  ENSSSCG00030046636 UniProtKB/TrEMBL
  ENSSSCG00035006816 UniProtKB/TrEMBL
  ENSSSCG00040073344 UniProtKB/TrEMBL
  ENSSSCG00045008507 UniProtKB/TrEMBL
  ENSSSCG00050008046 UniProtKB/TrEMBL
  ENSSSCG00060015996 UniProtKB/TrEMBL
  ENSSSCG00065011656 UniProtKB/TrEMBL
  ENSSSCG00070010846 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000086076.2 UniProtKB/TrEMBL
  ENSSSCT00000086190 ENTREZGENE
  ENSSSCT00000086190.2 UniProtKB/TrEMBL
  ENSSSCT00005045208.1 UniProtKB/TrEMBL
  ENSSSCT00015006661.1 UniProtKB/TrEMBL
  ENSSSCT00015006664.1 UniProtKB/TrEMBL
  ENSSSCT00015006667.1 UniProtKB/TrEMBL
  ENSSSCT00025092708.1 UniProtKB/TrEMBL
  ENSSSCT00025092821.1 UniProtKB/TrEMBL
  ENSSSCT00025092901.1 UniProtKB/TrEMBL
  ENSSSCT00030065067.1 UniProtKB/TrEMBL
  ENSSSCT00030065084.1 UniProtKB/TrEMBL
  ENSSSCT00030065093.1 UniProtKB/TrEMBL
  ENSSSCT00030065115.1 UniProtKB/TrEMBL
  ENSSSCT00035008462.1 UniProtKB/TrEMBL
  ENSSSCT00035008470.1 UniProtKB/TrEMBL
  ENSSSCT00040101174.1 UniProtKB/TrEMBL
  ENSSSCT00040101193.1 UniProtKB/TrEMBL
  ENSSSCT00045014328.1 UniProtKB/TrEMBL
  ENSSSCT00045014373.1 UniProtKB/TrEMBL
  ENSSSCT00045014405.1 UniProtKB/TrEMBL
  ENSSSCT00045014436.1 UniProtKB/TrEMBL
  ENSSSCT00050010980.1 UniProtKB/TrEMBL
  ENSSSCT00050010987.1 UniProtKB/TrEMBL
  ENSSSCT00050010993.1 UniProtKB/TrEMBL
  ENSSSCT00060021303.1 UniProtKB/TrEMBL
  ENSSSCT00060021306.1 UniProtKB/TrEMBL
  ENSSSCT00065015495.1 UniProtKB/TrEMBL
  ENSSSCT00065015500.1 UniProtKB/TrEMBL
  ENSSSCT00070021050.1 UniProtKB/TrEMBL
  ENSSSCT00070021054.1 UniProtKB/TrEMBL
  ENSSSCT00070021057.1 UniProtKB/TrEMBL
InterPro Na/K-Atpase_Interacting UniProtKB/TrEMBL
NCBI Gene NKAIN2 ENTREZGENE
PANTHER PTHR13084 UniProtKB/TrEMBL
  SODIUM/POTASSIUM-TRANSPORTING ATPASE SUBUNIT BETA-1-INTERACTING PROTEIN 2 UniProtKB/TrEMBL
Pfam NKAIN UniProtKB/TrEMBL
UniProt A0A4X1TQB7 ENTREZGENE, UniProtKB/TrEMBL
  A0A5G2QY30 ENTREZGENE
  A0A5G2R1V0_PIG UniProtKB/TrEMBL
  A0A8D0MFV3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0T380_PIG UniProtKB/TrEMBL
  A0A8D0TUF6_PIG UniProtKB/TrEMBL
  A0A8D0X1U9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1CKM0_PIG UniProtKB/TrEMBL
  A0A8D1H079_PIG UniProtKB/TrEMBL
UniProt Secondary A0A5G2QY30 UniProtKB/TrEMBL
VGNC ID VGNC:103141 ENTREZGENE