TOP1MT (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 4 | 1,148,890 - 1,188,130 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 4 | 1,134,179 - 1,188,149 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 4 | 1,068,174 - 1,125,241 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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TOP1MT (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 8 | 143,309,324 - 143,359,977 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 8 | 143,304,384 - 143,359,979 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 8 | 144,391,494 - 144,442,147 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 8 | 144,462,901 - 144,488,425 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 8 | 144,462,904 - 144,488,425 | NCBI | | | | | Celera | 8 | 140,700,651 - 140,727,260 (-) | NCBI | | Celera | | | Cytogenetic Map | 8 | q24.3 | NCBI | | | | | HuRef | 8 | 139,629,915 - 139,695,642 (-) | NCBI | | HuRef | | | CHM1_1 | 8 | 144,431,738 - 144,482,220 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 8 | 144,456,634 - 144,507,610 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Top1mt (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 15 | 75,528,878 - 75,551,184 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 15 | 75,528,884 - 75,550,649 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 15 | 75,657,033 - 75,678,800 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 15 | 75,657,035 - 75,678,800 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 15 | 75,487,463 - 75,509,220 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 15 | 75,484,288 - 75,506,045 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 15 | 77,157,202 - 77,179,081 (-) | NCBI | | Celera | | | Cytogenetic Map | 15 | D3 | NCBI | | | | | cM Map | 15 | 34.69 | NCBI | | | | |
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Top1mt (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 7 | 109,223,269 - 109,248,855 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 7 | 107,338,092 - 107,368,125 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 7 | 107,342,527 - 107,366,049 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 7 | 109,077,854 - 109,100,706 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 7 | 111,301,524 - 111,324,376 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 7 | 111,247,445 - 111,270,297 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 7 | 116,688,801 - 116,714,421 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 7 | 116,688,701 - 116,712,387 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 7 | 116,582,993 - 116,608,875 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 7 | 113,596,083 - 113,619,109 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 7 | 113,630,312 - 113,653,339 (-) | NCBI | | | | | Celera | 7 | 103,705,366 - 103,728,376 (-) | NCBI | | Celera | | | Cytogenetic Map | 7 | q34 | NCBI | | | | |
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Top1mt (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955454 | 2,021,563 - 2,046,190 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955454 | 2,020,884 - 2,045,939 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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TOP1MT (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 7 | 160,779,424 - 160,836,852 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 8 | 136,303,888 - 136,354,388 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 8 | 140,056,468 - 140,106,510 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 8 | 143,077,224 - 143,125,987 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | |
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LOC103237562 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 8 | 137,523,739 - 137,574,672 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 8 | 137,523,955 - 137,552,407 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023667018 | 8,188 - 24,004 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Top1mt (Heterocephalus glaber - naked mole-rat) |
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